Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493897

Identifier: 116493897

GI number: 116493897

Start: 329805

End: 330446

Strand: Direct

Name: 116493897

Synonym: LSEI_0329

Alternate gene names: NA

Gene position: 329805-330446 (Clockwise)

Preceding gene: 116493896

Following gene: 116493898

Centisome position: 11.39

GC content: 48.29

Gene sequence:

>642_bases
ATGATGAGCGATCAAAAGCAGATCTTGGTCCTGCTAGCAGGTGCGCCAGGCACGGGGAAAACGTATACTGCAAATAAGAT
CATGCAAGCAATCAGCGGATTCGTCTCCCTGCCGCTCGATCTTTTTAAAGAACATCTTTACGATGAGTTAGGCTTTGATA
ACCTTGAGGAAAAGCAACTCCTCGATGCAGAAGCGAGAGCACGATACTACCGCGGCATTGGCATGCTGATGCAGGAACAC
AAAATGATTCTGGGCGACTATCCCTTCAGCCGATTGCAAAAACCAGCGCTCGAAAAATTGGCAGCCAAACATCACTATGC
GGTTATCACCATCAGATTAGAAGCAGACATCAAGGTACTCTACGATCGCCAGCGAAAACGCGACCTATCCGATCCCCGTC
ATCTTGGTCATCTCATGAATCACTATCATCGCGGTGATACACTCGAAAACATCAGCGAAACGCCTGATGGCATGCCGACA
TTTGAAGTGTTTAGCAATCGCGTGCAAGATCGAGGCTACCAGACGTTTCAGCTAGGTCAGTTGATTCGAGTGGATGTGAA
TGATTATGGGACAGTGGATTATCGGGGGTTGGTGGAGGCGTTGAGAGAAGCGATTAGAGGCGTTGAATTCTTAACCCGAT
AG

Upstream 100 bases:

>100_bases
TAACCCGGCTAGAAGTCGACGTGTGACTGTGATGAATTGCGATCAAGGTCCTTAAATGAAGACTTCCGAGCTAGGGAGCC
CGTCTAGAGGAGAGGATGAC

Downstream 100 bases:

>100_bases
TGAAATCAGTTATCAAGACTTGCGATTTTTAATAATAGCTTTCAAATAACCTTGTCCCGAGCTTTGGAAACAAGGTTATT
TTTGTGGGGATTTTTGTAAT

Product: kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MMSDQKQILVLLAGAPGTGKTYTANKIMQAISGFVSLPLDLFKEHLYDELGFDNLEEKQLLDAEARARYYRGIGMLMQEH
KMILGDYPFSRLQKPALEKLAAKHHYAVITIRLEADIKVLYDRQRKRDLSDPRHLGHLMNHYHRGDTLENISETPDGMPT
FEVFSNRVQDRGYQTFQLGQLIRVDVNDYGTVDYRGLVEALREAIRGVEFLTR

Sequences:

>Translated_213_residues
MMSDQKQILVLLAGAPGTGKTYTANKIMQAISGFVSLPLDLFKEHLYDELGFDNLEEKQLLDAEARARYYRGIGMLMQEH
KMILGDYPFSRLQKPALEKLAAKHHYAVITIRLEADIKVLYDRQRKRDLSDPRHLGHLMNHYHRGDTLENISETPDGMPT
FEVFSNRVQDRGYQTFQLGQLIRVDVNDYGTVDYRGLVEALREAIRGVEFLTR
>Mature_213_residues
MMSDQKQILVLLAGAPGTGKTYTANKIMQAISGFVSLPLDLFKEHLYDELGFDNLEEKQLLDAEARARYYRGIGMLMQEH
KMILGDYPFSRLQKPALEKLAAKHHYAVITIRLEADIKVLYDRQRKRDLSDPRHLGHLMNHYHRGDTLENISETPDGMPT
FEVFSNRVQDRGYQTFQLGQLIRVDVNDYGTVDYRGLVEALREAIRGVEFLTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24545; Mature: 24545

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSDQKQILVLLAGAPGTGKTYTANKIMQAISGFVSLPLDLFKEHLYDELGFDNLEEKQL
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHH
LDAEARARYYRGIGMLMQEHKMILGDYPFSRLQKPALEKLAAKHHYAVITIRLEADIKVL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHH
YDRQRKRDLSDPRHLGHLMNHYHRGDTLENISETPDGMPTFEVFSNRVQDRGYQTFQLGQ
HHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCEEECCC
LIRVDVNDYGTVDYRGLVEALREAIRGVEFLTR
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMSDQKQILVLLAGAPGTGKTYTANKIMQAISGFVSLPLDLFKEHLYDELGFDNLEEKQL
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHH
LDAEARARYYRGIGMLMQEHKMILGDYPFSRLQKPALEKLAAKHHYAVITIRLEADIKVL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHH
YDRQRKRDLSDPRHLGHLMNHYHRGDTLENISETPDGMPTFEVFSNRVQDRGYQTFQLGQ
HHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCEEECCC
LIRVDVNDYGTVDYRGLVEALREAIRGVEFLTR
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA