| Definition | Lactobacillus casei ATCC 334, complete genome. |
|---|---|
| Accession | NC_008526 |
| Length | 2,895,264 |
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The map label for this gene is yegX [C]
Identifier: 116493807
GI number: 116493807
Start: 233467
End: 236232
Strand: Direct
Name: yegX [C]
Synonym: LSEI_0236
Alternate gene names: 116493807
Gene position: 233467-236232 (Clockwise)
Preceding gene: 116493806
Following gene: 116493809
Centisome position: 8.06
GC content: 44.36
Gene sequence:
>2766_bases ATGAAATTGAGTAAACATTTCAAGTTAATCATGACGGGGGCTTTTTCTTTGGCCTCAATCGGCTTGTTTGCACCGATTGT ATTGGGGCAAGGGCAACGAGTCTACGCAGGTACGCCCAGCACCGTTAGTACTGTGGTTAACGGTTCTGATGAACAAGACT TTCATCTCACCAATCAGCATTCGAATCTTGATACCGATAATCACGTTCTGGGCGGTGGTCAGGCGGGACCTGCTTTGCGC ACAAAGCGAAGTATTATGAGCAATGGTTTACAAGCGAATAGCATTCAAACATATTCACAAACTGTTATGAGTTTCACAAT TGGAGATTCACGAGTGCCGAGAGTCGATACCGTCGATGTGGCCTCTTATCAAAATGGGATGACCCAAGCTAATTACAATT CCCTCAGAGCTTCGGGAGTTAAAGCGGTTATTGTGAAGTCTTCTGAAGGATCAACTTACCGGAATCCATATGCGGCAAAA CAACTTGCTCAAGCGAAGGCTGCTGGACTCAAAACGGCAGTATATCACTACGTTCATTTTGCAAATCAATCTGATGCCAT TGCTGAAGCTAATTACTTTGCGAACACTTTGGACAGTCTTGGTTTCAGCAAAACCAGTCCAGTGGTTGCTGATATTGAGG ATAGTGATGTTGGCGGTGATGTCGCAGCCAATGTCAACGCTTTTTGGAACGTACTGAGTACCCGTGGTTATGTTAATCAT ATTGTCTATACAGGGCTTTACTACTCATATTCCAAAGCAGCAATTTCAACAGTTGGTAATGAGCGTGCCTGGGTCGCTCA GTATCCATATGTTCCAAGTGTGGACAATCTTCTGAATACCGGCTATGGTGCATGGCAATTTTCATCTATGGCAGGTATTC CCAACTATAATGGTCGCGTGGATGTCTCTATTGATTATCAGGGCATTTTTACGAGTGAGTTTTCTTTTGATCACATTACT GATAGTCACTCACTTAGCGGTGTGAAACAGATTGATGAGACCAATCGTGCAGATGGCATCTATTCCGCACCATTTAATAC GGTTGCCGGAGCGACCACCGAAAATCATGATGGCGTCAACTACAACGGCGACATGGTGCAGTTGATTCAACAAGCAACGA CGAAAAGAAGCACGTATGTTCAGGTAAAGGCGTCAAATGGACAGATCTTTTGGATTGATCAGGCTGCCCTTAAAGATCCC AAATCGGATCCGATTTTAGCCAAAACCACTGAAAATTATTTTGCATCCATTAATCAGACAAATCGCGCGGATGGTATTTA TTCTGGTGGGCCTTACAGGACAACACCTTCAGCATATGTGGCTAACTCGGATGCACCAAAGTATAAGGACCAGTTGGTGC ATGTGTTGGCTACGGAGCGAACTGGTTGGTCGACTTTTGCTGAAGTTCAATTTAGCAATGGCTCGATCTATTGGATCGAC ACACAGGCATTGAAGCGAAGCGGTTTTACGTCTATTATTGCTTCACAGACAACCAGTTATGAGGGCATTATTGATGAAAC CGGGCGAAACGATGGTGTGTATCACGACGGTCCTTATCAAACAAGTGCGGCCACATTTTTGATGAATTACGATGGGCCAA AGTACAATAATCGTTCTGTGACTGTTTTGAAAACTGCGAAAACGGCCTGGTCAACGTACGCTAATGTGAAGCTTGACGAT GGCACTACTTTCTGGATTGATACCGCGGCCATCAAGAAGGTTGTCCTTTACCCGACTCTGTCGCAAGAAACTGTTGATTA CAACGCAGTCATTGATGAGACAAATCGTAAAGACGGCGTCTATTTAACCGGTCCATATAGAAGTAATGTCAGTGAATACA GTGAAAATAGTAATGGCCCGAAATATAACGGTAAGGCTGTTCACGTAACGGCGCAAGCGACGAATAAGTGGTCAACTTAT GTTCAGGTTACAACAGCTGACGGTACTCGTTTTTGGATTGACAAGGCGGCAATAAAGCCCATTAGTCTTTATCCGATCCT TTCGTCTTCCGACCAGTCGTATACTGCGACTATTAATCAATCAACTCGGTCTGATGGTATCTATGCAAGTGGCCCCTATT CTACCTCACTAGCCACTTATGGTATTAATTACGATGCCAAGAAGTATAACGGTCAGACGGTTCAGGTTCTCAAAGAAGCA CGGACGAGCTGGTCAACATACGTTCTTGTCAAAACGGCTAGTGGCGCACAGTTTTGGATCGATAAGCTTGGCATTCAGTC GTCATATTTCCCAACGCTGTCTCAAAGCAATGTCAATTATGATGTCTTAATTGATGAGAATGGTCGTGCAGATGGTATTT ACTATGCTGGACCATATAATTCAAATGCAGCAACATCCGTTCAAAATAGTATTGGTCCGAAATATAATGGGCAGGCTGGA CATGCTTCTGTTGAAGCAACCAATAAGTGGTCAACTTACGTGAAGGTGACGCTGACAGATGGCACGAGTTTCTGGATTGA TAAGGCTGCTATCAAGTCTCTGCCAACTGATCCAGTGCTGAGTAGACGCTCAGTGCATTACACTGCTACGATTAACCAAA ACAATCGAGCAGATGGCGTCTATACGACAGGCCCATATCGAACTTCTTATCAGACATATACGATTAATTACGATGCCAAG AAGTATGATGGGCAACAAGGAACTGTTATGCAGGAAGTACAGACATCTTGGTCAACTTACGTTCAGATTAAGCTGGGTTC TGGCGCAACCATTTGGCTGGACAAAGCCGGTGTCCGTGCATCGTAA
Upstream 100 bases:
>100_bases AAACTAACATCATCGAAATTTTGACGAGGCTTTATGGGGAAATAGTCAAACGGTGCGTGTGTTCAAGTTACTGAATTCTA ACTAGGAGGAGTTGTAGAAA
Downstream 100 bases:
>100_bases TGTTGGATAGAAAATTAAAGCACAGGAGCTGTATTTCTTGAGCAGTTTTGGATATCGTGATCATGTCAGATCACGATATT TTTTCGGCTAAAATTCGGCT
Product: Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
Products: NA
Alternate protein names: Family; N-Acetylmuramidase/Lysin; Muramidase; 1 4-Beta-N-Acetylmuramidase; AlteRNAnsucrase; Levansucrase/Inulosucrase; Prophage Lp1 Lysin; Prophage Lp2 Lysin; Phage-Related 1 4-Beta-N-Acetyl Muramidase; Ypothetical Protein SMU.; Glycosyl Hydrolase
Number of amino acids: Translated: 921; Mature: 921
Protein sequence:
>921_residues MKLSKHFKLIMTGAFSLASIGLFAPIVLGQGQRVYAGTPSTVSTVVNGSDEQDFHLTNQHSNLDTDNHVLGGGQAGPALR TKRSIMSNGLQANSIQTYSQTVMSFTIGDSRVPRVDTVDVASYQNGMTQANYNSLRASGVKAVIVKSSEGSTYRNPYAAK QLAQAKAAGLKTAVYHYVHFANQSDAIAEANYFANTLDSLGFSKTSPVVADIEDSDVGGDVAANVNAFWNVLSTRGYVNH IVYTGLYYSYSKAAISTVGNERAWVAQYPYVPSVDNLLNTGYGAWQFSSMAGIPNYNGRVDVSIDYQGIFTSEFSFDHIT DSHSLSGVKQIDETNRADGIYSAPFNTVAGATTENHDGVNYNGDMVQLIQQATTKRSTYVQVKASNGQIFWIDQAALKDP KSDPILAKTTENYFASINQTNRADGIYSGGPYRTTPSAYVANSDAPKYKDQLVHVLATERTGWSTFAEVQFSNGSIYWID TQALKRSGFTSIIASQTTSYEGIIDETGRNDGVYHDGPYQTSAATFLMNYDGPKYNNRSVTVLKTAKTAWSTYANVKLDD GTTFWIDTAAIKKVVLYPTLSQETVDYNAVIDETNRKDGVYLTGPYRSNVSEYSENSNGPKYNGKAVHVTAQATNKWSTY VQVTTADGTRFWIDKAAIKPISLYPILSSSDQSYTATINQSTRSDGIYASGPYSTSLATYGINYDAKKYNGQTVQVLKEA RTSWSTYVLVKTASGAQFWIDKLGIQSSYFPTLSQSNVNYDVLIDENGRADGIYYAGPYNSNAATSVQNSIGPKYNGQAG HASVEATNKWSTYVKVTLTDGTSFWIDKAAIKSLPTDPVLSRRSVHYTATINQNNRADGVYTTGPYRTSYQTYTINYDAK KYDGQQGTVMQEVQTSWSTYVQIKLGSGATIWLDKAGVRAS
Sequences:
>Translated_921_residues MKLSKHFKLIMTGAFSLASIGLFAPIVLGQGQRVYAGTPSTVSTVVNGSDEQDFHLTNQHSNLDTDNHVLGGGQAGPALR TKRSIMSNGLQANSIQTYSQTVMSFTIGDSRVPRVDTVDVASYQNGMTQANYNSLRASGVKAVIVKSSEGSTYRNPYAAK QLAQAKAAGLKTAVYHYVHFANQSDAIAEANYFANTLDSLGFSKTSPVVADIEDSDVGGDVAANVNAFWNVLSTRGYVNH IVYTGLYYSYSKAAISTVGNERAWVAQYPYVPSVDNLLNTGYGAWQFSSMAGIPNYNGRVDVSIDYQGIFTSEFSFDHIT DSHSLSGVKQIDETNRADGIYSAPFNTVAGATTENHDGVNYNGDMVQLIQQATTKRSTYVQVKASNGQIFWIDQAALKDP KSDPILAKTTENYFASINQTNRADGIYSGGPYRTTPSAYVANSDAPKYKDQLVHVLATERTGWSTFAEVQFSNGSIYWID TQALKRSGFTSIIASQTTSYEGIIDETGRNDGVYHDGPYQTSAATFLMNYDGPKYNNRSVTVLKTAKTAWSTYANVKLDD GTTFWIDTAAIKKVVLYPTLSQETVDYNAVIDETNRKDGVYLTGPYRSNVSEYSENSNGPKYNGKAVHVTAQATNKWSTY VQVTTADGTRFWIDKAAIKPISLYPILSSSDQSYTATINQSTRSDGIYASGPYSTSLATYGINYDAKKYNGQTVQVLKEA RTSWSTYVLVKTASGAQFWIDKLGIQSSYFPTLSQSNVNYDVLIDENGRADGIYYAGPYNSNAATSVQNSIGPKYNGQAG HASVEATNKWSTYVKVTLTDGTSFWIDKAAIKSLPTDPVLSRRSVHYTATINQNNRADGVYTTGPYRTSYQTYTINYDAK KYDGQQGTVMQEVQTSWSTYVQIKLGSGATIWLDKAGVRAS >Mature_921_residues MKLSKHFKLIMTGAFSLASIGLFAPIVLGQGQRVYAGTPSTVSTVVNGSDEQDFHLTNQHSNLDTDNHVLGGGQAGPALR TKRSIMSNGLQANSIQTYSQTVMSFTIGDSRVPRVDTVDVASYQNGMTQANYNSLRASGVKAVIVKSSEGSTYRNPYAAK QLAQAKAAGLKTAVYHYVHFANQSDAIAEANYFANTLDSLGFSKTSPVVADIEDSDVGGDVAANVNAFWNVLSTRGYVNH IVYTGLYYSYSKAAISTVGNERAWVAQYPYVPSVDNLLNTGYGAWQFSSMAGIPNYNGRVDVSIDYQGIFTSEFSFDHIT DSHSLSGVKQIDETNRADGIYSAPFNTVAGATTENHDGVNYNGDMVQLIQQATTKRSTYVQVKASNGQIFWIDQAALKDP KSDPILAKTTENYFASINQTNRADGIYSGGPYRTTPSAYVANSDAPKYKDQLVHVLATERTGWSTFAEVQFSNGSIYWID TQALKRSGFTSIIASQTTSYEGIIDETGRNDGVYHDGPYQTSAATFLMNYDGPKYNNRSVTVLKTAKTAWSTYANVKLDD GTTFWIDTAAIKKVVLYPTLSQETVDYNAVIDETNRKDGVYLTGPYRSNVSEYSENSNGPKYNGKAVHVTAQATNKWSTY VQVTTADGTRFWIDKAAIKPISLYPILSSSDQSYTATINQSTRSDGIYASGPYSTSLATYGINYDAKKYNGQTVQVLKEA RTSWSTYVLVKTASGAQFWIDKLGIQSSYFPTLSQSNVNYDVLIDENGRADGIYYAGPYNSNAATSVQNSIGPKYNGQAG HASVEATNKWSTYVKVTLTDGTSFWIDKAAIKSLPTDPVLSRRSVHYTATINQNNRADGVYTTGPYRTSYQTYTINYDAK KYDGQQGTVMQEVQTSWSTYVQIKLGSGATIWLDKAGVRAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100614; Mature: 100614
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSKHFKLIMTGAFSLASIGLFAPIVLGQGQRVYAGTPSTVSTVVNGSDEQDFHLTNQH CCCCCCEEEEEECCHHHHHHHHHHHHEECCCCEEEECCCHHHHHEECCCCCCCEEEECCC SNLDTDNHVLGGGQAGPALRTKRSIMSNGLQANSIQTYSQTVMSFTIGDSRVPRVDTVDV CCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCCCCCCCEEEH ASYQNGMTQANYNSLRASGVKAVIVKSSEGSTYRNPYAAKQLAQAKAAGLKTAVYHYVHF HHHCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHEEEEEEE ANQSDAIAEANYFANTLDSLGFSKTSPVVADIEDSDVGGDVAANVNAFWNVLSTRGYVNH CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEECHHHHHHHHHCCCHHHH IVYTGLYYSYSKAAISTVGNERAWVAQYPYVPSVDNLLNTGYGAWQFSSMAGIPNYNGRV HEEEEEEEEHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCEEECCCCCCCCCCCEE DVSIDYQGIFTSEFSFDHITDSHSLSGVKQIDETNRADGIYSAPFNTVAGATTENHDGVN EEEEEECEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCHHCCCCCCCCCCCC YNGDMVQLIQQATTKRSTYVQVKASNGQIFWIDQAALKDPKSDPILAKTTENYFASINQT CCCHHHHHHHHHHCCCCEEEEEEECCCEEEEEEHHHHCCCCCCCEEEEECCHHHEECCCC NRADGIYSGGPYRTTPSAYVANSDAPKYKDQLVHVLATERTGWSTFAEVQFSNGSIYWID CCCCCCCCCCCCCCCCCCEEECCCCCHHHHHEEEEEEECCCCCCEEEEEEECCCEEEEEE TQALKRSGFTSIIASQTTSYEGIIDETGRNDGVYHDGPYQTSAATFLMNYDGPKYNNRSV HHHHHHCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEE TVLKTAKTAWSTYANVKLDDGTTFWIDTAAIKKVVLYPTLSQETVDYNAVIDETNRKDGV EEEEECCCCHHEEEEEEECCCCEEEEEHHHHCEEEEEECCCCCCCCEEEEEECCCCCCCE YLTGPYRSNVSEYSENSNGPKYNGKAVHVTAQATNKWSTYVQVTTADGTRFWIDKAAIKP EEECCHHCCHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEHHCCCE ISLYPILSSSDQSYTATINQSTRSDGIYASGPYSTSLATYGINYDAKKYNGQTVQVLKEA EEEEEEECCCCCCEEEEEECCCCCCCCEECCCCCCCEEEECCCCCCHHCCCCHHHHHHHH RTSWSTYVLVKTASGAQFWIDKLGIQSSYFPTLSQSNVNYDVLIDENGRADGIYYAGPYN HCCCEEEEEEEECCCCEEHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCC SNAATSVQNSIGPKYNGQAGHASVEATNKWSTYVKVTLTDGTSFWIDKAAIKSLPTDPVL CCCHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEEEEECCCCEEEEHHHHHCCCCCCCC SRRSVHYTATINQNNRADGVYTTGPYRTSYQTYTINYDAKKYDGQQGTVMQEVQTSWSTY CCCEEEEEEEECCCCCCCCCEECCCCEECEEEEEEEECHHHCCCCCCHHHHHHHCCCEEE VQIKLGSGATIWLDKAGVRAS EEEEECCCCEEEEECCCCCCC >Mature Secondary Structure MKLSKHFKLIMTGAFSLASIGLFAPIVLGQGQRVYAGTPSTVSTVVNGSDEQDFHLTNQH CCCCCCEEEEEECCHHHHHHHHHHHHEECCCCEEEECCCHHHHHEECCCCCCCEEEECCC SNLDTDNHVLGGGQAGPALRTKRSIMSNGLQANSIQTYSQTVMSFTIGDSRVPRVDTVDV CCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHHEEEEEEECCCCCCCCCEEEH ASYQNGMTQANYNSLRASGVKAVIVKSSEGSTYRNPYAAKQLAQAKAAGLKTAVYHYVHF HHHCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHEEEEEEE ANQSDAIAEANYFANTLDSLGFSKTSPVVADIEDSDVGGDVAANVNAFWNVLSTRGYVNH CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEECHHHHHHHHHCCCHHHH IVYTGLYYSYSKAAISTVGNERAWVAQYPYVPSVDNLLNTGYGAWQFSSMAGIPNYNGRV HEEEEEEEEHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCEEECCCCCCCCCCCEE DVSIDYQGIFTSEFSFDHITDSHSLSGVKQIDETNRADGIYSAPFNTVAGATTENHDGVN EEEEEECEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCHHCCCCCCCCCCCC YNGDMVQLIQQATTKRSTYVQVKASNGQIFWIDQAALKDPKSDPILAKTTENYFASINQT CCCHHHHHHHHHHCCCCEEEEEEECCCEEEEEEHHHHCCCCCCCEEEEECCHHHEECCCC NRADGIYSGGPYRTTPSAYVANSDAPKYKDQLVHVLATERTGWSTFAEVQFSNGSIYWID CCCCCCCCCCCCCCCCCCEEECCCCCHHHHHEEEEEEECCCCCCEEEEEEECCCEEEEEE TQALKRSGFTSIIASQTTSYEGIIDETGRNDGVYHDGPYQTSAATFLMNYDGPKYNNRSV HHHHHHCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEE TVLKTAKTAWSTYANVKLDDGTTFWIDTAAIKKVVLYPTLSQETVDYNAVIDETNRKDGV EEEEECCCCHHEEEEEEECCCCEEEEEHHHHCEEEEEECCCCCCCCEEEEEECCCCCCCE YLTGPYRSNVSEYSENSNGPKYNGKAVHVTAQATNKWSTYVQVTTADGTRFWIDKAAIKP EEECCHHCCHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCEEEEEHHCCCE ISLYPILSSSDQSYTATINQSTRSDGIYASGPYSTSLATYGINYDAKKYNGQTVQVLKEA EEEEEEECCCCCCEEEEEECCCCCCCCEECCCCCCCEEEECCCCCCHHCCCCHHHHHHHH RTSWSTYVLVKTASGAQFWIDKLGIQSSYFPTLSQSNVNYDVLIDENGRADGIYYAGPYN HCCCEEEEEEEECCCCEEHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCC SNAATSVQNSIGPKYNGQAGHASVEATNKWSTYVKVTLTDGTSFWIDKAAIKSLPTDPVL CCCHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEEEEEECCCCEEEEHHHHHCCCCCCCC SRRSVHYTATINQNNRADGVYTTGPYRTSYQTYTINYDAKKYDGQQGTVMQEVQTSWSTY CCCEEEEEEEECCCCCCCCCEECCCCEECEEEEEEEECHHHCCCCCCHHHHHHHCCCEEE VQIKLGSGATIWLDKAGVRAS EEEEECCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA