Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is yyzM [H]

Identifier: 116493785

GI number: 116493785

Start: 209038

End: 209220

Strand: Direct

Name: yyzM [H]

Synonym: LSEI_0214

Alternate gene names: 116493785

Gene position: 209038-209220 (Clockwise)

Preceding gene: 116493784

Following gene: 116493786

Centisome position: 7.22

GC content: 42.08

Gene sequence:

>183_bases
ATGTATGATTTACATGATCTCGTTCAGATGAAGAAACCGCATGCTTGCGGTACCAACAAATGGGAAATTATCCGCTTAGG
TGCTGATATCAAGATCAAATGTACCGGATGCGGTCATATTGTGATGATGTCCCGGCGCGATTTTGAAAAACGACTCAAAA
AAGTGTTGGGTCATGTAGAGTAG

Upstream 100 bases:

>100_bases
AGCGAACGCGTTTAAAAGCAGAGCGTGAGCAGGCCCGTTTAGAAACTTGCGAACGCGTTTAATCCGGTCCGACAAGCACA
ACAACGCTGGAGGTGGACAA

Downstream 100 bases:

>100_bases
ACAGACTAAATAGAAAGTGTGAAGTAACCAAATGGCTTTAACAGCAGGTATCGTAGGACTTCCAAACGTCGGTAAGTCCA
CGCTTTTTAACGCAATCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MYDLHDLVQMKKPHACGTNKWEIIRLGADIKIKCTGCGHIVMMSRRDFEKRLKKVLGHVE

Sequences:

>Translated_60_residues
MYDLHDLVQMKKPHACGTNKWEIIRLGADIKIKCTGCGHIVMMSRRDFEKRLKKVLGHVE
>Mature_60_residues
MYDLHDLVQMKKPHACGTNKWEIIRLGADIKIKCTGCGHIVMMSRRDFEKRLKKVLGHVE

Specific function: Unknown

COG id: COG4481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009296 [H]

Pfam domain/function: PF06107 DUF951 [H]

EC number: NA

Molecular weight: Translated: 6979; Mature: 6979

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
11.7 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
11.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDLHDLVQMKKPHACGTNKWEIIRLGADIKIKCTGCGHIVMMSRRDFEKRLKKVLGHVE
CCCHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MYDLHDLVQMKKPHACGTNKWEIIRLGADIKIKCTGCGHIVMMSRRDFEKRLKKVLGHVE
CCCHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEECCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]