Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493771

Identifier: 116493771

GI number: 116493771

Start: 199116

End: 199655

Strand: Direct

Name: 116493771

Synonym: LSEI_0200

Alternate gene names: NA

Gene position: 199116-199655 (Clockwise)

Preceding gene: 116493770

Following gene: 116493772

Centisome position: 6.88

GC content: 49.63

Gene sequence:

>540_bases
ATGAGACCCATCACAAAAATCATGCTTGGCATCATTGCCGTTGGCGGTTTATTGCAAAGTGTTGGTTTCGGGTTATTGCT
TTGGCCAAGCCGTGAGTTTACGCGATTTTATCTGCAACAAGTCGTTTGGCTGCGGCCAACCATGATAGGCCTGACTGGGC
TTGTCGCTTTGGTTTTCCTCATCATGCTATTGGTCGCCATTTTCAGGCGGTCAACCGCTCAGTCGCTGATTCTAGCTGGT
GAAGATGGTGATCTGACGCTTGATAAAAGTGCGATCGAAAACACCGTGGCCAAAGCGGTTGTTGCGCAACATTTTGCCAA
ATCGGTGGCGGTAGCTGTTAGCATTCGCAAGAAGCAAGTCGCACGAATGCGGATTGAAGCTTTTTCCGGTAATAGCAAGG
ATCTGAAGGCAGAGGCCAAGCAAATCGAAGAAACTGCTCGTCAGAAGTTGCAGGCCTGTCTCGGTATTCCTGTGAAGCAT
GTGCGGGTGCATCTCTTGCCAGCCACAAAGGTCAAAGCGAAAACGGCCCGTGTGATTTAA

Upstream 100 bases:

>100_bases
ATGGCCTTGATCCCAGCCATTATAGGGGCCATCATCGTCGTCTTCCTTGTTTCCCTGTTGCTGGGAACCACACGGCGCAA
GGCATAGGAGGCCGATGACC

Downstream 100 bases:

>100_bases
CGATGACAACACTGGGACAACAAGCAAATGGCATTCAAAGCGGACACTTTCCAAAGATGTCGATGCCTTTGACGACGTGC
TCAGCTAGAAGGAGAGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MRPITKIMLGIIAVGGLLQSVGFGLLLWPSREFTRFYLQQVVWLRPTMIGLTGLVALVFLIMLLVAIFRRSTAQSLILAG
EDGDLTLDKSAIENTVAKAVVAQHFAKSVAVAVSIRKKQVARMRIEAFSGNSKDLKAEAKQIEETARQKLQACLGIPVKH
VRVHLLPATKVKAKTARVI

Sequences:

>Translated_179_residues
MRPITKIMLGIIAVGGLLQSVGFGLLLWPSREFTRFYLQQVVWLRPTMIGLTGLVALVFLIMLLVAIFRRSTAQSLILAG
EDGDLTLDKSAIENTVAKAVVAQHFAKSVAVAVSIRKKQVARMRIEAFSGNSKDLKAEAKQIEETARQKLQACLGIPVKH
VRVHLLPATKVKAKTARVI
>Mature_179_residues
MRPITKIMLGIIAVGGLLQSVGFGLLLWPSREFTRFYLQQVVWLRPTMIGLTGLVALVFLIMLLVAIFRRSTAQSLILAG
EDGDLTLDKSAIENTVAKAVVAQHFAKSVAVAVSIRKKQVARMRIEAFSGNSKDLKAEAKQIEETARQKLQACLGIPVKH
VRVHLLPATKVKAKTARVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19640; Mature: 19640

Theoretical pI: Translated: 11.40; Mature: 11.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPITKIMLGIIAVGGLLQSVGFGLLLWPSREFTRFYLQQVVWLRPTMIGLTGLVALVFL
CCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMLLVAIFRRSTAQSLILAGEDGDLTLDKSAIENTVAKAVVAQHFAKSVAVAVSIRKKQV
HHHHHHHHHCCCHHHEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARMRIEAFSGNSKDLKAEAKQIEETARQKLQACLGIPVKHVRVHLLPATKVKAKTARVI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCHHHHHHHCCC
>Mature Secondary Structure
MRPITKIMLGIIAVGGLLQSVGFGLLLWPSREFTRFYLQQVVWLRPTMIGLTGLVALVFL
CCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMLLVAIFRRSTAQSLILAGEDGDLTLDKSAIENTVAKAVVAQHFAKSVAVAVSIRKKQV
HHHHHHHHHCCCHHHEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARMRIEAFSGNSKDLKAEAKQIEETARQKLQACLGIPVKHVRVHLLPATKVKAKTARVI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA