Click here to switch to the map view.

The map label for this gene is ywzA [H]

Identifier: 116493770

GI number: 116493770

Start: 198845

End: 199102

Strand: Direct

Name: ywzA [H]

Synonym: LSEI_0199

Alternate gene names: 116493770

Gene position: 198845-199102 (Clockwise)

Preceding gene: 116493769

Following gene: 116493771

Centisome position: 6.87

GC content: 55.04

Gene sequence:

>258_bases
ATGATGCATTTTATTTGGACACTGATCATCGGTGCGGTGATTGGTTGTATTGGACAGCTGATCGTTGGGCGCGATATGCC
ACTCGGCTGGCTTGGTAACATTATCGGCGGCTTAGTCGGTGCATGGCTCGGCACGGCACTCCTTGGTGACTGGGGGCCTT
CATTGGCCGGAATGGCCTTGATCCCAGCCATTATAGGGGCCATCATCGTCGTCTTCCTTGTTTCCCTGTTGCTGGGAACC
ACACGGCGCAAGGCATAG

Upstream 100 bases:

>100_bases
ACTAATTGTTATCATTAGCATATTTATTGCTTCGAATAACCTCGTTTCGTTAAGCTTAGGATAGTCAGAAGAAAGTCAAC
CAAAAGAAAGGGTGAGAACC

Downstream 100 bases:

>100_bases
GAGGCCGATGACCATGAGACCCATCACAAAAATCATGCTTGGCATCATTGCCGTTGGCGGTTTATTGCAAAGTGTTGGTT
TCGGGTTATTGCTTTGGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MMHFIWTLIIGAVIGCIGQLIVGRDMPLGWLGNIIGGLVGAWLGTALLGDWGPSLAGMALIPAIIGAIIVVFLVSLLLGT
TRRKA

Sequences:

>Translated_85_residues
MMHFIWTLIIGAVIGCIGQLIVGRDMPLGWLGNIIGGLVGAWLGTALLGDWGPSLAGMALIPAIIGAIIVVFLVSLLLGT
TRRKA
>Mature_85_residues
MMHFIWTLIIGAVIGCIGQLIVGRDMPLGWLGNIIGGLVGAWLGTALLGDWGPSLAGMALIPAIIGAIIVVFLVSLLLGT
TRRKA

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0410 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007341 [H]

Pfam domain/function: PF04226 Transgly_assoc [H]

EC number: NA

Molecular weight: Translated: 8836; Mature: 8836

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHFIWTLIIGAVIGCIGQLIVGRDMPLGWLGNIIGGLVGAWLGTALLGDWGPSLAGMAL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IPAIIGAIIVVFLVSLLLGTTRRKA
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMHFIWTLIIGAVIGCIGQLIVGRDMPLGWLGNIIGGLVGAWLGTALLGDWGPSLAGMAL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IPAIIGAIIVVFLVSLLLGTTRRKA
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]