Definition Lactobacillus casei ATCC 334, complete genome.
Accession NC_008526
Length 2,895,264

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The map label for this gene is 116493726

Identifier: 116493726

GI number: 116493726

Start: 153070

End: 153366

Strand: Direct

Name: 116493726

Synonym: LSEI_0154

Alternate gene names: NA

Gene position: 153070-153366 (Clockwise)

Preceding gene: 116493724

Following gene: 116493728

Centisome position: 5.29

GC content: 47.14

Gene sequence:

>297_bases
ATGTTTAATTTTTTGGATAATCCTGCAGAGTACAAACGATTGATGAAGATGGAGATTTTGGTAGCCGTCATGGCAATTGT
GGCTAGTGTGGTCATGTTTCGATTGAGTGTCATGACTGGTGCTTTGTTCGCGGCCATTGCCGGGGCTTTCTTCATCATGG
ATGCGATTGTTGAAGGCTTGCGACTACTTGGTGCTTCACATGGTTTTAGCCGCTTGATGGGTACCTTAATTGCGATTCCG
GCGTTGGCGGGGTATTTGCTCGTGATGATGACCTTGTTTCCGGCGCCAATGGTCTAA

Upstream 100 bases:

>100_bases
GTCTTTTCAAAATTCTTGGCTCTGAGGCTAATGATCCTGGCAGGCGTGGTATGCTCTCGACATTGAAGATTTGTCAGACC
AAAAGGAGCGCGTGCCAGCG

Downstream 100 bases:

>100_bases
CGATAGGCGCGTGCCAAGACTGGGTGTCAGTCGGCAGCCAAGTATGTTGAGCAAATGAGCATTAAAACAACGAAAAAGAT
CTTTGTACGGACGCGTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MFNFLDNPAEYKRLMKMEILVAVMAIVASVVMFRLSVMTGALFAAIAGAFFIMDAIVEGLRLLGASHGFSRLMGTLIAIP
ALAGYLLVMMTLFPAPMV

Sequences:

>Translated_98_residues
MFNFLDNPAEYKRLMKMEILVAVMAIVASVVMFRLSVMTGALFAAIAGAFFIMDAIVEGLRLLGASHGFSRLMGTLIAIP
ALAGYLLVMMTLFPAPMV
>Mature_98_residues
MFNFLDNPAEYKRLMKMEILVAVMAIVASVVMFRLSVMTGALFAAIAGAFFIMDAIVEGLRLLGASHGFSRLMGTLIAIP
ALAGYLLVMMTLFPAPMV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10603; Mature: 10603

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
11.2 %Met     (Translated Protein)
11.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
11.2 %Met     (Mature Protein)
11.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNFLDNPAEYKRLMKMEILVAVMAIVASVVMFRLSVMTGALFAAIAGAFFIMDAIVEGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLGASHGFSRLMGTLIAIPALAGYLLVMMTLFPAPMV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFNFLDNPAEYKRLMKMEILVAVMAIVASVVMFRLSVMTGALFAAIAGAFFIMDAIVEGL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLGASHGFSRLMGTLIAIPALAGYLLVMMTLFPAPMV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA