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The map label for this gene is csbB [H]

Identifier: 116493338

GI number: 116493338

Start: 1586744

End: 1587670

Strand: Reverse

Name: csbB [H]

Synonym: PEPE_1610

Alternate gene names: 116493338

Gene position: 1587670-1586744 (Counterclockwise)

Preceding gene: 116493340

Following gene: 116493337

Centisome position: 86.64

GC content: 38.4

Gene sequence:

>927_bases
TTGAAAAAGTTATCAATAATTGTTCCAGCATATAATGAAGAGGAGACAGTCGGGTTATTTTATGACGCTTTCTCTAAAGT
AGAATCACAAATGGATGTGGAACCAGAAATTATTTTTGTAGATGATGGTTCTAAAGATAAGACTTTAATCGAATTAAAAA
AATTACAAAAAGAGCATGAAGAAGTTCACTATATTAGTTTTTCAAGAAATTTTGGAAAAGAAGCGGCCTTGTATGCTGGT
CTCCAAAAAGCGACAGGAGATTTTGTAGCAGTGATGGATGTTGATTTACAAGATCCTCCGGAACTACTTCCTAAAATGCT
TAAAATTGTCGAAGAAGGCGAATATGATGCCGTTGCCACCCGAAGACAAGATCGAGATGGCGAAAGCAAGATTCGTTCAT
TCTTCGCGCGCATGTTTTATAAGTGGATTAATAAGGTAAGTTCTTTAGAATTAGTTGATGGTGCTCGGGATTTCCGCGTA
ATGACTCGTCAAATGGTTGATAGTGTATTATCTATGGACGAACGTGAACGTTTCAGTAAGGGACTTTTTAACTGGGTGGG
GTTCAATACCTATTACATTTCCTACGAAAATCGTGAACGAGTAGCCGGTAGTACATCTTGGTCATTCTGGGGGTTACTTA
AATATGCGATTGAAGGGTTTATTTCATTTTCAACAGCTCCATTGTCGTTTGTTACTTCTGCAGGGGTACTAACGTGCGTG
TTAGCTGTTTTGGGAGCTATAGCAGTGGTGATTAGGGCAATCCTATTCCCACATACAGCGGCCTTTGGATGGCCTTCTCT
AGCAGTGATTATATTGTTCTTTAGTGGGGTTCAATTGTTGAGCCTTGGTATTATCGGACGCTATATTGCCGAAATCTATT
TAGAAACAAAAAATCGTCCAATTTACATTATTAAGGAGGAGAAGTAA

Upstream 100 bases:

>100_bases
ATGATGTCATCTCCGAATCATTGTAAGGTTAACTTATTAAGTAAAACATGAAAGTACAAAAAAAGAAAGTTTATTTAATA
GTTTGGATAGGTGAAGTAGT

Downstream 100 bases:

>100_bases
TGGCCAGCCGAAGACCCTTACTACTGACGCTGACTATTTTTGTGATTACCGCGATAATTGTAACATTACCGGCCTTCAGC
GGAAATTTTCTAAAGCTGAC

Product: glycosyltransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKKLSIIVPAYNEEETVGLFYDAFSKVESQMDVEPEIIFVDDGSKDKTLIELKKLQKEHEEVHYISFSRNFGKEAALYAG
LQKATGDFVAVMDVDLQDPPELLPKMLKIVEEGEYDAVATRRQDRDGESKIRSFFARMFYKWINKVSSLELVDGARDFRV
MTRQMVDSVLSMDERERFSKGLFNWVGFNTYYISYENRERVAGSTSWSFWGLLKYAIEGFISFSTAPLSFVTSAGVLTCV
LAVLGAIAVVIRAILFPHTAAFGWPSLAVIILFFSGVQLLSLGIIGRYIAEIYLETKNRPIYIIKEEK

Sequences:

>Translated_308_residues
MKKLSIIVPAYNEEETVGLFYDAFSKVESQMDVEPEIIFVDDGSKDKTLIELKKLQKEHEEVHYISFSRNFGKEAALYAG
LQKATGDFVAVMDVDLQDPPELLPKMLKIVEEGEYDAVATRRQDRDGESKIRSFFARMFYKWINKVSSLELVDGARDFRV
MTRQMVDSVLSMDERERFSKGLFNWVGFNTYYISYENRERVAGSTSWSFWGLLKYAIEGFISFSTAPLSFVTSAGVLTCV
LAVLGAIAVVIRAILFPHTAAFGWPSLAVIILFFSGVQLLSLGIIGRYIAEIYLETKNRPIYIIKEEK
>Mature_308_residues
MKKLSIIVPAYNEEETVGLFYDAFSKVESQMDVEPEIIFVDDGSKDKTLIELKKLQKEHEEVHYISFSRNFGKEAALYAG
LQKATGDFVAVMDVDLQDPPELLPKMLKIVEEGEYDAVATRRQDRDGESKIRSFFARMFYKWINKVSSLELVDGARDFRV
MTRQMVDSVLSMDERERFSKGLFNWVGFNTYYISYENRERVAGSTSWSFWGLLKYAIEGFISFSTAPLSFVTSAGVLTCV
LAVLGAIAVVIRAILFPHTAAFGWPSLAVIILFFSGVQLLSLGIIGRYIAEIYLETKNRPIYIIKEEK

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=175, Percent_Identity=26.2857142857143, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI1788692, Length=306, Percent_Identity=41.1764705882353, Blast_Score=239, Evalue=2e-64,
Organism=Escherichia coli, GI1788588, Length=310, Percent_Identity=29.6774193548387, Blast_Score=158, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI71999402, Length=186, Percent_Identity=29.5698924731183, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6325441, Length=118, Percent_Identity=33.0508474576271, Blast_Score=69, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24585265, Length=175, Percent_Identity=30.2857142857143, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35040; Mature: 35040

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSIIVPAYNEEETVGLFYDAFSKVESQMDVEPEIIFVDDGSKDKTLIELKKLQKEHE
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
EVHYISFSRNFGKEAALYAGLQKATGDFVAVMDVDLQDPPELLPKMLKIVEEGEYDAVAT
HHEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHH
RRQDRDGESKIRSFFARMFYKWINKVSSLELVDGARDFRVMTRQMVDSVLSMDERERFSK
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHH
GLFNWVGFNTYYISYENRERVAGSTSWSFWGLLKYAIEGFISFSTAPLSFVTSAGVLTCV
HHHHHHCCEEEEEEECCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LAVLGAIAVVIRAILFPHTAAFGWPSLAVIILFFSGVQLLSLGIIGRYIAEIYLETKNRP
HHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IYIIKEEK
EEEEECCC
>Mature Secondary Structure
MKKLSIIVPAYNEEETVGLFYDAFSKVESQMDVEPEIIFVDDGSKDKTLIELKKLQKEHE
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHH
EVHYISFSRNFGKEAALYAGLQKATGDFVAVMDVDLQDPPELLPKMLKIVEEGEYDAVAT
HHEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHH
RRQDRDGESKIRSFFARMFYKWINKVSSLELVDGARDFRVMTRQMVDSVLSMDERERFSK
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHH
GLFNWVGFNTYYISYENRERVAGSTSWSFWGLLKYAIEGFISFSTAPLSFVTSAGVLTCV
HHHHHHCCEEEEEEECCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LAVLGAIAVVIRAILFPHTAAFGWPSLAVIILFFSGVQLLSLGIIGRYIAEIYLETKNRP
HHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IYIIKEEK
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]