| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is tagG [H]
Identifier: 116493335
GI number: 116493335
Start: 1579040
End: 1579855
Strand: Reverse
Name: tagG [H]
Synonym: PEPE_1607
Alternate gene names: 116493335
Gene position: 1579855-1579040 (Counterclockwise)
Preceding gene: 116493337
Following gene: 116493334
Centisome position: 86.22
GC content: 33.95
Gene sequence:
>816_bases ATGAATACAATGTTCAAAATAATTAGTGACCAATTCACTAATTTTAAGATAATTCGACGGATGGCTAAGTATGATGACCG TGCTAATTATCAAAGTCATTATCTAGGTTTAGCTTGGGAATTTTTGAATCCGCTGATTCAAATTGGAATTTACTATCTCG TCTTCGGGGTGGCTTTGAAGCGTGGAGATCCAATGCCAGGAGTACCATATTTGCCATGGATGGTGATGGGAATTGCTCCT TGGTTGTATATGAATAAGACAACTTTAGATGCTTCTAAAAGTATTTATCAACAAGTTGGGCTAGTTTCTAAAATGAAATT TCCAATTAACGTTTTGCCATCTATTAAAATTATGGGAAATTTATATAGTTTCTGGACGATGATGGCTTTTGGTGTGTTTT TGATGTTTGTTAATCGAATTTGGCCAACCATTTCATGGGTCCAATTCATATATTATTTTATTTGTATGATTGCACTTATG TATGCGTTGGGAATTTTTAATTCAACAGTGAGTGTACTAGTGCGTGATTGGCAAATTGCCCTACAATCAGTGTTAAGAAT GCTGTTTTATATGAGTGGAGTATTGTTTAACTTCGTTACTTCAAATTTTCCACCTGTATTAGTACGTCTTTTAGAATTGA ATCCTTTTTATTACGTTATTAACGGAATCCGGGAGTCGTTGCTTTCTAAGGGCTGGGTATGGCAACAACCAAATCTCAAC TTAACGATTTCGTTCTGGTTGTTTATTTTTATTGTGATGATATTTGGTAGTTATCTACATAATAAATTCCGTGCTAATTT TGTGGATTTGATTTAA
Upstream 100 bases:
>100_bases AAAATAAGATTTTTAAAAGTTTAGTAATACTGTTTAATTACTTTTGAAATTATAGTAAAGTTTTAAATTAGTTATATTTA TTAAAGGAGCAATACAAACG
Downstream 100 bases:
>100_bases GCCGAGGAGTCTGAAATGGATAATACTTATAAAATTAAATTAGAAAATGTAACAAAAGAGTATGACCTTTTTAAATCAAA AAGTGATAAACTAAAGAACT
Product: ABC-type polysaccharide/polyol phosphate export system, permease component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNTMFKIISDQFTNFKIIRRMAKYDDRANYQSHYLGLAWEFLNPLIQIGIYYLVFGVALKRGDPMPGVPYLPWMVMGIAP WLYMNKTTLDASKSIYQQVGLVSKMKFPINVLPSIKIMGNLYSFWTMMAFGVFLMFVNRIWPTISWVQFIYYFICMIALM YALGIFNSTVSVLVRDWQIALQSVLRMLFYMSGVLFNFVTSNFPPVLVRLLELNPFYYVINGIRESLLSKGWVWQQPNLN LTISFWLFIFIVMIFGSYLHNKFRANFVDLI
Sequences:
>Translated_271_residues MNTMFKIISDQFTNFKIIRRMAKYDDRANYQSHYLGLAWEFLNPLIQIGIYYLVFGVALKRGDPMPGVPYLPWMVMGIAP WLYMNKTTLDASKSIYQQVGLVSKMKFPINVLPSIKIMGNLYSFWTMMAFGVFLMFVNRIWPTISWVQFIYYFICMIALM YALGIFNSTVSVLVRDWQIALQSVLRMLFYMSGVLFNFVTSNFPPVLVRLLELNPFYYVINGIRESLLSKGWVWQQPNLN LTISFWLFIFIVMIFGSYLHNKFRANFVDLI >Mature_271_residues MNTMFKIISDQFTNFKIIRRMAKYDDRANYQSHYLGLAWEFLNPLIQIGIYYLVFGVALKRGDPMPGVPYLPWMVMGIAP WLYMNKTTLDASKSIYQQVGLVSKMKFPINVLPSIKIMGNLYSFWTMMAFGVFLMFVNRIWPTISWVQFIYYFICMIALM YALGIFNSTVSVLVRDWQIALQSVLRMLFYMSGVLFNFVTSNFPPVLVRLLELNPFYYVINGIRESLLSKGWVWQQPNLN LTISFWLFIFIVMIFGSYLHNKFRANFVDLI
Specific function: Part of the ABC transporter complex tagGH (TC 3.A.1.34.1) involved in exporting the two types of intracellularly synthesized teichoic acids. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1682
COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000412 - InterPro: IPR013525 [H]
Pfam domain/function: PF01061 ABC2_membrane [H]
EC number: NA
Molecular weight: Translated: 31882; Mature: 31882
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTMFKIISDQFTNFKIIRRMAKYDDRANYQSHYLGLAWEFLNPLIQIGIYYLVFGVALK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGDPMPGVPYLPWMVMGIAPWLYMNKTTLDASKSIYQQVGLVSKMKFPINVLPSIKIMGN CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHH LYSFWTMMAFGVFLMFVNRIWPTISWVQFIYYFICMIALMYALGIFNSTVSVLVRDWQIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQSVLRMLFYMSGVLFNFVTSNFPPVLVRLLELNPFYYVINGIRESLLSKGWVWQQPNLN HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCC LTISFWLFIFIVMIFGSYLHNKFRANFVDLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTMFKIISDQFTNFKIIRRMAKYDDRANYQSHYLGLAWEFLNPLIQIGIYYLVFGVALK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGDPMPGVPYLPWMVMGIAPWLYMNKTTLDASKSIYQQVGLVSKMKFPINVLPSIKIMGN CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHH LYSFWTMMAFGVFLMFVNRIWPTISWVQFIYYFICMIALMYALGIFNSTVSVLVRDWQIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQSVLRMLFYMSGVLFNFVTSNFPPVLVRLLELNPFYYVINGIRESLLSKGWVWQQPNLN HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCC LTISFWLFIFIVMIFGSYLHNKFRANFVDLI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7565096; 9384377 [H]