BacMap

Definition	Pediococcus pentosaceus ATCC 25745, complete genome.
Accession	NC_008525
Length	1,832,387

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The map label for this gene is tagH [H]

Identifier: 116493334

GI number: 116493334

Start: 1577963

End: 1579024

Strand: Reverse

Name: tagH [H]

Synonym: PEPE_1606

Alternate gene names: 116493334

Gene position: 1579024-1577963 (Counterclockwise)

Preceding gene: 116493335

Following gene: 116493333

Centisome position: 86.17

GC content: 34.75

Gene sequence:

>1062_bases
ATGGATAATACTTATAAAATTAAATTAGAAAATGTAACAAAAGAGTATGACCTTTTTAAATCAAAAAGTGATAAACTAAA
GAACTTTTTTAATATTGGGAAAGTAGATGTTCCACATTTCTGGTCTTTAAAAGGTGTTAGTCTAACAATTAAAAAAGGGG
AAACTTTTGGAATAATTGGAGTGAATGGTTCAGGAAAATCAACCATTTCAAATATTATTTCCGGAATCATTCCTCAAACC
ACAGGAATGGTCGATGTTAAAGGTGATACTTCAATTATTGCGATTGGCGCTGGTTTAAAGAGAAACTTAACTGGTGCCGA
AAACATCCGTCTAAAGGGTCTGATGCAAGGTTTGACAATCAAAGAGATTGATGAAGTTAGAGATTCCATCATCGATTTTG
CCGATATCGGTACTTTTATTGATCAACCGGTTAAGGACTATTCTAGTGGGATGCGTTCCCGTTTGGGATTTGCAATTGCG
GTACACATTAACCCTGATATCATGATTATTGATGAGGCATTGTCTGTTGGTGATGATACTTTCTATCAAAAGTGTGTGGA
CAAGATTATGGAATTCAAGGAACAAGGAAAGACTATTTTGTTTGTTAGTCATTCCCTTAATCAAGTAAAAATGATTTGTG
ATAGAGTTGCATGGATGCATTTTGGAGAACTACGAGAAATTGGCGAGACAGAGGAAGTAATTGAACACTACCGTAAATTC
TCAAGTGACTTCAAAAAGAAGACAGCCAAAGAACGTAAAAAATACCAACAAGATAAGAAAAAAGAGCAAATTAAATTTAA
CATTGATGAGTATCGTAAGTCTCTAATTGAAGATGAAGTCAAGAAGGGCATCGATAAAAATCAAGCAGAAAAGGATGTAC
AGGAAAGAATGTATCATCAAATAACTCCAGACAAGATGTCTTTGACAACCAGGATTGTTACTGGAATAGCAATATTAGGA
CTTGCATTCTTTGCGTTGGTAAACATTTCTGGCCACTCAGTTACTAATTCGCTGGAACATCCAACAACGTTAATGCATCC
AGTACAACATAAAGTTAGGTAA

Upstream 100 bases:

>100_bases
GTTCTGGTTGTTTATTTTTATTGTGATGATATTTGGTAGTTATCTACATAATAAATTCCGTGCTAATTTTGTGGATTTGA
TTTAAGCCGAGGAGTCTGAA

Downstream 100 bases:

>100_bases
TTAAAAGTAAAAACCATGATTTGAGATATAGATGTATATCTAATTCATGGTTTTTATTAAGGAGGAGTGGTTAGAGTGGA
ATTAAGTAATGCAAAAGCGG

Product: ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MDNTYKIKLENVTKEYDLFKSKSDKLKNFFNIGKVDVPHFWSLKGVSLTIKKGETFGIIGVNGSGKSTISNIISGIIPQT
TGMVDVKGDTSIIAIGAGLKRNLTGAENIRLKGLMQGLTIKEIDEVRDSIIDFADIGTFIDQPVKDYSSGMRSRLGFAIA
VHINPDIMIIDEALSVGDDTFYQKCVDKIMEFKEQGKTILFVSHSLNQVKMICDRVAWMHFGELREIGETEEVIEHYRKF
SSDFKKKTAKERKKYQQDKKKEQIKFNIDEYRKSLIEDEVKKGIDKNQAEKDVQERMYHQITPDKMSLTTRIVTGIAILG
LAFFALVNISGHSVTNSLEHPTTLMHPVQHKVR

Sequences:

>Translated_353_residues
MDNTYKIKLENVTKEYDLFKSKSDKLKNFFNIGKVDVPHFWSLKGVSLTIKKGETFGIIGVNGSGKSTISNIISGIIPQT
TGMVDVKGDTSIIAIGAGLKRNLTGAENIRLKGLMQGLTIKEIDEVRDSIIDFADIGTFIDQPVKDYSSGMRSRLGFAIA
VHINPDIMIIDEALSVGDDTFYQKCVDKIMEFKEQGKTILFVSHSLNQVKMICDRVAWMHFGELREIGETEEVIEHYRKF
SSDFKKKTAKERKKYQQDKKKEQIKFNIDEYRKSLIEDEVKKGIDKNQAEKDVQERMYHQITPDKMSLTTRIVTGIAILG
LAFFALVNISGHSVTNSLEHPTTLMHPVQHKVR
>Mature_353_residues
MDNTYKIKLENVTKEYDLFKSKSDKLKNFFNIGKVDVPHFWSLKGVSLTIKKGETFGIIGVNGSGKSTISNIISGIIPQT
TGMVDVKGDTSIIAIGAGLKRNLTGAENIRLKGLMQGLTIKEIDEVRDSIIDFADIGTFIDQPVKDYSSGMRSRLGFAIA
VHINPDIMIIDEALSVGDDTFYQKCVDKIMEFKEQGKTILFVSHSLNQVKMICDRVAWMHFGELREIGETEEVIEHYRKF
SSDFKKKTAKERKKYQQDKKKEQIKFNIDEYRKSLIEDEVKKGIDKNQAEKDVQERMYHQITPDKMSLTTRIVTGIAILG
LAFFALVNISGHSVTNSLEHPTTLMHPVQHKVR

Specific function: Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27262624, Length=241, Percent_Identity=30.7053941908714, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI27262626, Length=241, Percent_Identity=30.7053941908714, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI153792144, Length=220, Percent_Identity=28.6363636363636, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI31657092, Length=208, Percent_Identity=29.8076923076923, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI27477115, Length=255, Percent_Identity=29.0196078431373, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI6005701, Length=211, Percent_Identity=28.9099526066351, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI27436953, Length=197, Percent_Identity=27.4111675126904, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI116734710, Length=247, Percent_Identity=26.3157894736842, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI45446740, Length=294, Percent_Identity=23.8095238095238, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI47078218, Length=294, Percent_Identity=23.8095238095238, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI105990541, Length=208, Percent_Identity=26.4423076923077, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI30795238, Length=206, Percent_Identity=27.1844660194175, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI27881501, Length=206, Percent_Identity=27.1844660194175, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI150417984, Length=198, Percent_Identity=23.2323232323232, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI21536376, Length=200, Percent_Identity=23.5, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI148612844, Length=222, Percent_Identity=27.4774774774775, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI255708477, Length=222, Percent_Identity=27.4774774774775, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI66529005, Length=234, Percent_Identity=27.7777777777778, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1789032, Length=214, Percent_Identity=28.0373831775701, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787500, Length=223, Percent_Identity=28.2511210762332, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI48994943, Length=213, Percent_Identity=27.6995305164319, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=27.2300469483568, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1786703, Length=202, Percent_Identity=28.2178217821782, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87081709, Length=211, Percent_Identity=25.5924170616114, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786398, Length=229, Percent_Identity=26.2008733624454, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87081782, Length=232, Percent_Identity=25, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790739, Length=212, Percent_Identity=27.8301886792453, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789672, Length=213, Percent_Identity=24.4131455399061, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786319, Length=207, Percent_Identity=24.6376811594203, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786253, Length=202, Percent_Identity=27.2277227722772, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1790190, Length=203, Percent_Identity=27.0935960591133, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787029, Length=227, Percent_Identity=25.1101321585903, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787370, Length=207, Percent_Identity=24.6376811594203, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI48995001, Length=232, Percent_Identity=21.551724137931, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787712, Length=236, Percent_Identity=22.0338983050847, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790467, Length=215, Percent_Identity=24.1860465116279, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1789593, Length=225, Percent_Identity=24.4444444444444, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1786563, Length=194, Percent_Identity=21.1340206185567, Blast_Score=62, Evalue=6e-11,
Organism=Escherichia coli, GI1789751, Length=258, Percent_Identity=22.4806201550388, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=227, Percent_Identity=25.1101321585903, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17565586, Length=256, Percent_Identity=25, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17510237, Length=210, Percent_Identity=26.1904761904762, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71983510, Length=206, Percent_Identity=25.2427184466019, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71983523, Length=206, Percent_Identity=25.2427184466019, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71983516, Length=206, Percent_Identity=25.2427184466019, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25146777, Length=220, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI193211015, Length=217, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=217, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=217, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193202349, Length=222, Percent_Identity=28.8288288288288, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193202878, Length=187, Percent_Identity=25.668449197861, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=261, Percent_Identity=26.8199233716475, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71984940, Length=246, Percent_Identity=23.9837398373984, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24643674, Length=213, Percent_Identity=27.2300469483568, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI221512771, Length=236, Percent_Identity=25.8474576271186, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI221500365, Length=185, Percent_Identity=25.9459459459459, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI116007184, Length=185, Percent_Identity=25.9459459459459, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24648314, Length=198, Percent_Identity=23.7373737373737, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574150, Length=205, Percent_Identity=23.4146341463415, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI116007328, Length=205, Percent_Identity=23.4146341463415, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI161077321, Length=252, Percent_Identity=26.1904761904762, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR015860
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.40 [H]

Molecular weight: Translated: 39984; Mature: 39984

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNTYKIKLENVTKEYDLFKSKSDKLKNFFNIGKVDVPHFWSLKGVSLTIKKGETFGIIG
CCCEEEEEECCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEE
VNGSGKSTISNIISGIIPQTTGMVDVKGDTSIIAIGAGLKRNLTGAENIRLKGLMQGLTI
ECCCCHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCH
KEIDEVRDSIIDFADIGTFIDQPVKDYSSGMRSRLGFAIAVHINPDIMIIDEALSVGDDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEECHHHCCCHH
FYQKCVDKIMEFKEQGKTILFVSHSLNQVKMICDRVAWMHFGELREIGETEEVIEHYRKF
HHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SSDFKKKTAKERKKYQQDKKKEQIKFNIDEYRKSLIEDEVKKGIDKNQAEKDVQERMYHQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ITPDKMSLTTRIVTGIAILGLAFFALVNISGHSVTNSLEHPTTLMHPVQHKVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MDNTYKIKLENVTKEYDLFKSKSDKLKNFFNIGKVDVPHFWSLKGVSLTIKKGETFGIIG
CCCEEEEEECCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEE
VNGSGKSTISNIISGIIPQTTGMVDVKGDTSIIAIGAGLKRNLTGAENIRLKGLMQGLTI
ECCCCHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCH
KEIDEVRDSIIDFADIGTFIDQPVKDYSSGMRSRLGFAIAVHINPDIMIIDEALSVGDDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEECHHHCCCHH
FYQKCVDKIMEFKEQGKTILFVSHSLNQVKMICDRVAWMHFGELREIGETEEVIEHYRKF
HHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SSDFKKKTAKERKKYQQDKKKEQIKFNIDEYRKSLIEDEVKKGIDKNQAEKDVQERMYHQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ITPDKMSLTTRIVTGIAILGLAFFALVNISGHSVTNSLEHPTTLMHPVQHKVR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12566566 [H]