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The map label for this gene is pbpX [H]

Identifier: 116493332

GI number: 116493332

Start: 1575040

End: 1576164

Strand: Reverse

Name: pbpX [H]

Synonym: PEPE_1604

Alternate gene names: 116493332

Gene position: 1576164-1575040 (Counterclockwise)

Preceding gene: 116493333

Following gene: 116493331

Centisome position: 86.02

GC content: 31.2

Gene sequence:

>1125_bases
ATGAAGTTTCTTAATTTTAAAAAATATATAATTATTTTTTTCTTTATTCTAATTTGCAGTGTAGGCGCTGTGATCTTTAA
AAATCGGACTACGCAAACGATTAAACCAACTATAAGTTCTAATACTAGAGTGGGAATTCCGGTAGTGAAAAAAAGTAAAT
ATAAAGGGGTACTAAAGAAAAAATTTAAGCGAGTAAGATTCAGTGGTACAGCAATTTTAATCAAAAATAATAAAATAGTA
GATAGCTATACCTCTGATTGGGCAAATATTAATAGTAAAAATACGTTATCTACTAGTTACGAAATAGATTCACTGCAAAA
AGTTTTAACAGCTGGCTTAGTAATGATGCAAGTTAATAAGGGTACCATGAAGTTAACGGATAAGGTTAATAAATTTATCC
CCGAATTGCCTGGTGCTAAAGATATAACAATTCGTGATTTACTAGATATGAGTTCGGGATTAACCTTGAAAAAAATGAGT
TTTTCAGGTGATGACTTATCTAGCGCTGAACTTTTAGATGATGTGGTTGATAATGTTAAGTATGATCCTATTGCTAGGAA
AAATAAAAAATGGAGTTATCAACCAGTTAATTTTGTGATTTTATCAGAAATCCTTGAAGAAATTACTGGGGAAAGCTATA
AGCAATTATTTAATCAAACATATATTAAGAAGTTAGGTCTTAAGCAGACAAAATTCGCTTATGAAAATAACGAGAGAATC
AACTGTGCTTCTGGATATATGGTAAAAAATGATAGTGAAAAAGTTGAACAAAAACCTAATGGCGCGACGATTCATTCAGA
GTTGGGAACTGGGCAGGTTTATATGTCAGCTCCTGATTATTATAAAGTGTTATCTAATTTATTGAATGGGAAAATTTTAG
GCAAGAATAATGCTACAAAACTTTATTTGCCAGGTAAGGCTAAGTACCAAGCAGGGTTGTACACATCAAATAAGCCATTT
TACCGATTTGCTAATGGTTATGGCTATGGATTTGAGGATCATGTGCGCATCAGCCAAGATGGTAAAGAAGCAGTTGTTGT
ATTTAGTAATCAAAAAAGAATTGGTAGAAATGATCTAAAAATGAAAGTTGATCAACTATCAAATGAATTTCTAGGTGAAA
AATAA

Upstream 100 bases:

>100_bases
GAATATAAATCTAAAATTGTAAGTAAAGTAAGTTTAAGTGCTATGTATATGTGCTGGGGGATTTCTCTAGTATCTTATAC
ATTTGGAAGAAGGAAGCGGC

Downstream 100 bases:

>100_bases
CTATGTTGAAAGTATGGTTAATTGTAAACGAGGTTATAGAAATATATTACACTAACATCAAATAATGTGGTTAGGAAGAT
AAACTTTATGAATTTAATCG

Product: Beta-lactamase class C related penicillin binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKFLNFKKYIIIFFFILICSVGAVIFKNRTTQTIKPTISSNTRVGIPVVKKSKYKGVLKKKFKRVRFSGTAILIKNNKIV
DSYTSDWANINSKNTLSTSYEIDSLQKVLTAGLVMMQVNKGTMKLTDKVNKFIPELPGAKDITIRDLLDMSSGLTLKKMS
FSGDDLSSAELLDDVVDNVKYDPIARKNKKWSYQPVNFVILSEILEEITGESYKQLFNQTYIKKLGLKQTKFAYENNERI
NCASGYMVKNDSEKVEQKPNGATIHSELGTGQVYMSAPDYYKVLSNLLNGKILGKNNATKLYLPGKAKYQAGLYTSNKPF
YRFANGYGYGFEDHVRISQDGKEAVVVFSNQKRIGRNDLKMKVDQLSNEFLGEK

Sequences:

>Translated_374_residues
MKFLNFKKYIIIFFFILICSVGAVIFKNRTTQTIKPTISSNTRVGIPVVKKSKYKGVLKKKFKRVRFSGTAILIKNNKIV
DSYTSDWANINSKNTLSTSYEIDSLQKVLTAGLVMMQVNKGTMKLTDKVNKFIPELPGAKDITIRDLLDMSSGLTLKKMS
FSGDDLSSAELLDDVVDNVKYDPIARKNKKWSYQPVNFVILSEILEEITGESYKQLFNQTYIKKLGLKQTKFAYENNERI
NCASGYMVKNDSEKVEQKPNGATIHSELGTGQVYMSAPDYYKVLSNLLNGKILGKNNATKLYLPGKAKYQAGLYTSNKPF
YRFANGYGYGFEDHVRISQDGKEAVVVFSNQKRIGRNDLKMKVDQLSNEFLGEK
>Mature_374_residues
MKFLNFKKYIIIFFFILICSVGAVIFKNRTTQTIKPTISSNTRVGIPVVKKSKYKGVLKKKFKRVRFSGTAILIKNNKIV
DSYTSDWANINSKNTLSTSYEIDSLQKVLTAGLVMMQVNKGTMKLTDKVNKFIPELPGAKDITIRDLLDMSSGLTLKKMS
FSGDDLSSAELLDDVVDNVKYDPIARKNKKWSYQPVNFVILSEILEEITGESYKQLFNQTYIKKLGLKQTKFAYENNERI
NCASGYMVKNDSEKVEQKPNGATIHSELGTGQVYMSAPDYYKVLSNLLNGKILGKNNATKLYLPGKAKYQAGLYTSNKPF
YRFANGYGYGFEDHVRISQDGKEAVVVFSNQKRIGRNDLKMKVDQLSNEFLGEK

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential). Note=Localizes to the division septum during vegetative growth, and accumulates at the prespore during sporulation [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-lactamase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI115533026, Length=172, Percent_Identity=30.2325581395349, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 42336; Mature: 42336

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLNFKKYIIIFFFILICSVGAVIFKNRTTQTIKPTISSNTRVGIPVVKKSKYKGVLKK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEECCEEECCCHHHHHHHH
KFKRVRFSGTAILIKNNKIVDSYTSDWANINSKNTLSTSYEIDSLQKVLTAGLVMMQVNK
HHHHHEECCEEEEEECCEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCEEEEEECC
GTMKLTDKVNKFIPELPGAKDITIRDLLDMSSGLTLKKMSFSGDDLSSAELLDDVVDNVK
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCC
YDPIARKNKKWSYQPVNFVILSEILEEITGESYKQLFNQTYIKKLGLKQTKFAYENNERI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHEEECCCCEE
NCASGYMVKNDSEKVEQKPNGATIHSELGTGQVYMSAPDYYKVLSNLLNGKILGKNNATK
EECCCCEEECCCHHHHCCCCCCEEEECCCCCEEEEECCHHHHHHHHHHCCEEECCCCCEE
LYLPGKAKYQAGLYTSNKPFYRFANGYGYGFEDHVRISQDGKEAVVVFSNQKRIGRNDLK
EEECCCCCEECCEEECCCCCEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCHHHH
MKVDQLSNEFLGEK
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKFLNFKKYIIIFFFILICSVGAVIFKNRTTQTIKPTISSNTRVGIPVVKKSKYKGVLKK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEECCEEECCCHHHHHHHH
KFKRVRFSGTAILIKNNKIVDSYTSDWANINSKNTLSTSYEIDSLQKVLTAGLVMMQVNK
HHHHHEECCEEEEEECCEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCEEEEEECC
GTMKLTDKVNKFIPELPGAKDITIRDLLDMSSGLTLKKMSFSGDDLSSAELLDDVVDNVK
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCC
YDPIARKNKKWSYQPVNFVILSEILEEITGESYKQLFNQTYIKKLGLKQTKFAYENNERI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHEEECCCCEE
NCASGYMVKNDSEKVEQKPNGATIHSELGTGQVYMSAPDYYKVLSNLLNGKILGKNNATK
EECCCCEEECCCHHHHCCCCCCEEEECCCCCEEEEECCHHHHHHHHHHCCEEECCCCCEE
LYLPGKAKYQAGLYTSNKPFYRFANGYGYGFEDHVRISQDGKEAVVVFSNQKRIGRNDLK
EEECCCCCEECCEEECCCCCEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCHHHH
MKVDQLSNEFLGEK
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]