| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is tagF [H]
Identifier: 116493331
GI number: 116493331
Start: 1573771
End: 1574952
Strand: Reverse
Name: tagF [H]
Synonym: PEPE_1603
Alternate gene names: 116493331
Gene position: 1574952-1573771 (Counterclockwise)
Preceding gene: 116493332
Following gene: 116493330
Centisome position: 85.95
GC content: 32.57
Gene sequence:
>1182_bases ATGAATTTAATCGAATTATTAAAAAAGATAAAGCGCAAAATTTTAGCTCAGATGTTTAATTTAAATTACAGGCCGTATAC ACATACTACGGTCATCTTTGAAAGCTTTGGTGGACGTCAAATCAGTGATTCTCCGTTAGCTATTTATAAAGAGTTGAAAA AAACTCATCCTGAATATCGTTTGATTTGGGTTGTAAACAAGGGATTAGCAACCCAGGCAGAGAAGAACGGATATGATTAT GTAATACGTGGCTCTTTCAAATGGGTTCGAACAATCGAAAAAGCCCAAGTTTGGGTTGAAAATGCTCGTTTACCGCAGTG GGTGCGGAAACCCGATCACATAAAATTAATCCAAACATGGCACGGGACACCTTTGAAAAAACTCGGATTAGATATTAAAA ATGTTGTGATGCCTGGGACGAACACGGAACGTTATCATCAAAATTTTGTTAGGGAAGCCAATCGTTGGGATGTGTTAATT AGTCCAAATACATACTCAACTAATATTTTTCGACAAGCTTTTGGTTATCAGAATAAAATTGTAGAAATTGGTTACCCACG GAATGATAAATTGGCTAATCCCACAAAAGAAGAAATTAAATTGTTAAAACAAAAATTAGGAATTCCTTTAGATAAAAAGG TTATTATGTATGCTCCAACGTATCGAGATAATCAATTTTTTCAAAAGGGTAAATATTCATTTGAATTACCTTTTAGTTTA AAAGAATTCCAAGAACGATTTGGAAGCAATGCAGTGCTTTTACTTAGAATGCATTATTTGATAGCGAATTCAATGGATAT TTCAGGGTTTGAAGATTTTGCATACGATGTATCTAGTTATGCAGATATTTCTGAATTATACTTAGTATCGGATTTACTAA TAACGGATTATTCGAGCGTCTTTTTCGATTATGCATATCTTAAGCGTCCGATTTTATTTTATCCGTATGATTATGAAATT TATAAGGACGAGTTGCGGGGATTTTATTTGGATTACCAAAAAGACTTACCTGGTAAAATTGCATATAATTCGGTTGATTT ATACGATGAAATTGAGAACGAATTAAAGGAAAATGATATAAGTAATAATCAACAATTTGAGATGTTTTATAAGCGTTTTT GTGGACTTAATGCTGGAAATGCGTCAAAGCGAATTGTTGAAGAAATTGAAAGAAATTTATAA
Upstream 100 bases:
>100_bases AGGTGAAAAATAACTATGTTGAAAGTATGGTTAATTGTAAACGAGGTTATAGAAATATATTACACTAACATCAAATAATG TGGTTAGGAAGATAAACTTT
Downstream 100 bases:
>100_bases TTTTTGTCTGTGTAACTGAAATATTTTAATTTAAAAAATAGTTGAGAAGATTTTAAAATCTTTTCGACTATTTTTTTGTA AAATTAAAATTTATTTTTAA
Product: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
Products: NA
Alternate protein names: CGPTase; Major teichoic acid biosynthesis protein F; Polyglycerol phosphate polymerase [H]
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MNLIELLKKIKRKILAQMFNLNYRPYTHTTVIFESFGGRQISDSPLAIYKELKKTHPEYRLIWVVNKGLATQAEKNGYDY VIRGSFKWVRTIEKAQVWVENARLPQWVRKPDHIKLIQTWHGTPLKKLGLDIKNVVMPGTNTERYHQNFVREANRWDVLI SPNTYSTNIFRQAFGYQNKIVEIGYPRNDKLANPTKEEIKLLKQKLGIPLDKKVIMYAPTYRDNQFFQKGKYSFELPFSL KEFQERFGSNAVLLLRMHYLIANSMDISGFEDFAYDVSSYADISELYLVSDLLITDYSSVFFDYAYLKRPILFYPYDYEI YKDELRGFYLDYQKDLPGKIAYNSVDLYDEIENELKENDISNNQQFEMFYKRFCGLNAGNASKRIVEEIERNL
Sequences:
>Translated_393_residues MNLIELLKKIKRKILAQMFNLNYRPYTHTTVIFESFGGRQISDSPLAIYKELKKTHPEYRLIWVVNKGLATQAEKNGYDY VIRGSFKWVRTIEKAQVWVENARLPQWVRKPDHIKLIQTWHGTPLKKLGLDIKNVVMPGTNTERYHQNFVREANRWDVLI SPNTYSTNIFRQAFGYQNKIVEIGYPRNDKLANPTKEEIKLLKQKLGIPLDKKVIMYAPTYRDNQFFQKGKYSFELPFSL KEFQERFGSNAVLLLRMHYLIANSMDISGFEDFAYDVSSYADISELYLVSDLLITDYSSVFFDYAYLKRPILFYPYDYEI YKDELRGFYLDYQKDLPGKIAYNSVDLYDEIENELKENDISNNQQFEMFYKRFCGLNAGNASKRIVEEIERNL >Mature_393_residues MNLIELLKKIKRKILAQMFNLNYRPYTHTTVIFESFGGRQISDSPLAIYKELKKTHPEYRLIWVVNKGLATQAEKNGYDY VIRGSFKWVRTIEKAQVWVENARLPQWVRKPDHIKLIQTWHGTPLKKLGLDIKNVVMPGTNTERYHQNFVREANRWDVLI SPNTYSTNIFRQAFGYQNKIVEIGYPRNDKLANPTKEEIKLLKQKLGIPLDKKVIMYAPTYRDNQFFQKGKYSFELPFSL KEFQERFGSNAVLLLRMHYLIANSMDISGFEDFAYDVSSYADISELYLVSDLLITDYSSVFFDYAYLKRPILFYPYDYEI YKDELRGFYLDYQKDLPGKIAYNSVDLYDEIENELKENDISNNQQFEMFYKRFCGLNAGNASKRIVEEIERNL
Specific function: Is responsible for the polymerization of the main chain of the major teichoic acid by sequential transfer of glycerol phosphate units from CDP-glycerol to the dissacharide linkage unit. Synthesizes polymers of approximately 35 glycerol phosphate units in
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-glycerol glycerophosphotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007554 [H]
Pfam domain/function: PF04464 Glyphos_transf [H]
EC number: =2.7.8.12 [H]
Molecular weight: Translated: 46532; Mature: 46532
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLIELLKKIKRKILAQMFNLNYRPYTHTTVIFESFGGRQISDSPLAIYKELKKTHPEYR CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEE LIWVVNKGLATQAEKNGYDYVIRGSFKWVRTIEKAQVWVENARLPQWVRKPDHIKLIQTW EEEEEECCCCCHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEC HGTPLKKLGLDIKNVVMPGTNTERYHQNFVREANRWDVLISPNTYSTNIFRQAFGYQNKI CCCCHHHHCCCHHHEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCE VEIGYPRNDKLANPTKEEIKLLKQKLGIPLDKKVIMYAPTYRDNQFFQKGKYSFELPFSL EEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEEECCCCH KEFQERFGSNAVLLLRMHYLIANSMDISGFEDFAYDVSSYADISELYLVSDLLITDYSSV HHHHHHHCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH FFDYAYLKRPILFYPYDYEIYKDELRGFYLDYQKDLPGKIAYNSVDLYDEIENELKENDI HHHHHHHCCCEEEECCCHHHHHHHHCCEEEECCCCCCCCEEECCCHHHHHHHHHHHHCCC SNNQQFEMFYKRFCGLNAGNASKRIVEEIERNL CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNLIELLKKIKRKILAQMFNLNYRPYTHTTVIFESFGGRQISDSPLAIYKELKKTHPEYR CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEE LIWVVNKGLATQAEKNGYDYVIRGSFKWVRTIEKAQVWVENARLPQWVRKPDHIKLIQTW EEEEEECCCCCHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEC HGTPLKKLGLDIKNVVMPGTNTERYHQNFVREANRWDVLISPNTYSTNIFRQAFGYQNKI CCCCHHHHCCCHHHEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCE VEIGYPRNDKLANPTKEEIKLLKQKLGIPLDKKVIMYAPTYRDNQFFQKGKYSFELPFSL EEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCEEEECCCCH KEFQERFGSNAVLLLRMHYLIANSMDISGFEDFAYDVSSYADISELYLVSDLLITDYSSV HHHHHHHCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH FFDYAYLKRPILFYPYDYEIYKDELRGFYLDYQKDLPGKIAYNSVDLYDEIENELKENDI HHHHHHHCCCEEEECCCHHHHHHHHCCEEEECCCCCCCCEEECCCHHHHHHHHHHHHCCC SNNQQFEMFYKRFCGLNAGNASKRIVEEIERNL CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2507871; 9384377; 1309530; 12637499 [H]