Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493253

Identifier: 116493253

GI number: 116493253

Start: 1483406

End: 1483786

Strand: Reverse

Name: 116493253

Synonym: PEPE_1515

Alternate gene names: NA

Gene position: 1483786-1483406 (Counterclockwise)

Preceding gene: 116493254

Following gene: 116493252

Centisome position: 80.98

GC content: 37.01

Gene sequence:

>381_bases
ATGGCTCAATCAATTAATACAAAAGCAGATTTGGTAATCGATGCTACCTCATTTTTGGGGATGGGTGATTACGGAAAAAT
TATGATTGGCGATCACGGTTTTGAATTTTTTGACAATCGTAATGTTGAAAACTTCATTCAAATTCCTTGGGAAGAAGTTG
ATACAGTGATTGCTTCCTTGGTCTTTGGGGGTAGATGGATTCCAAGATTTGCCATTAAAACTAAACGAAGTGGAACCTAT
AGTTTCGCTTCTAAAAAAACCCATGAAGTTTTAAGAGAAATTAGAAAACATGTTGATGCTGACCGCATGGTACGTTCGTT
AGGGGTTTGGGACGTAATCAAACGAGGAGTAATGAGCATTTTCAAGCGTAAAGCTAAATAA

Upstream 100 bases:

>100_bases
ATTAAGTCTGGGCTATGGCCTAGGCTTTTTTTATTAAAATTTTTGGTGAAATGTACCTTAAGTATTATAATTGGATAAAA
AGAAGAATGGAGTAATTTGA

Downstream 100 bases:

>100_bases
TAATTAAATAATCATTTGAAACTATGCTAAAAAGCGATTTGAGACGACCTGATTAAAGCAAGTCTAAAAAATATTTGGAC
GAGGGACGGAAAGATGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MAQSINTKADLVIDATSFLGMGDYGKIMIGDHGFEFFDNRNVENFIQIPWEEVDTVIASLVFGGRWIPRFAIKTKRSGTY
SFASKKTHEVLREIRKHVDADRMVRSLGVWDVIKRGVMSIFKRKAK

Sequences:

>Translated_126_residues
MAQSINTKADLVIDATSFLGMGDYGKIMIGDHGFEFFDNRNVENFIQIPWEEVDTVIASLVFGGRWIPRFAIKTKRSGTY
SFASKKTHEVLREIRKHVDADRMVRSLGVWDVIKRGVMSIFKRKAK
>Mature_125_residues
AQSINTKADLVIDATSFLGMGDYGKIMIGDHGFEFFDNRNVENFIQIPWEEVDTVIASLVFGGRWIPRFAIKTKRSGTYS
FASKKTHEVLREIRKHVDADRMVRSLGVWDVIKRGVMSIFKRKAK

Specific function: Unknown

COG id: COG4687

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14441; Mature: 14310

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQSINTKADLVIDATSFLGMGDYGKIMIGDHGFEFFDNRNVENFIQIPWEEVDTVIASL
CCCCCCCCCCEEEEHHHHCCCCCCCEEEECCCCCHHHCCCCHHHHHCCCHHHHHHHHHHH
VFGGRWIPRFAIKTKRSGTYSFASKKTHEVLREIRKHVDADRMVRSLGVWDVIKRGVMSI
HHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH
FKRKAK
HHHCCC
>Mature Secondary Structure 
AQSINTKADLVIDATSFLGMGDYGKIMIGDHGFEFFDNRNVENFIQIPWEEVDTVIASL
CCCCCCCCCEEEEHHHHCCCCCCCEEEECCCCCHHHCCCCHHHHHCCCHHHHHHHHHHH
VFGGRWIPRFAIKTKRSGTYSFASKKTHEVLREIRKHVDADRMVRSLGVWDVIKRGVMSI
HHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH
FKRKAK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA