| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493253
Identifier: 116493253
GI number: 116493253
Start: 1483406
End: 1483786
Strand: Reverse
Name: 116493253
Synonym: PEPE_1515
Alternate gene names: NA
Gene position: 1483786-1483406 (Counterclockwise)
Preceding gene: 116493254
Following gene: 116493252
Centisome position: 80.98
GC content: 37.01
Gene sequence:
>381_bases ATGGCTCAATCAATTAATACAAAAGCAGATTTGGTAATCGATGCTACCTCATTTTTGGGGATGGGTGATTACGGAAAAAT TATGATTGGCGATCACGGTTTTGAATTTTTTGACAATCGTAATGTTGAAAACTTCATTCAAATTCCTTGGGAAGAAGTTG ATACAGTGATTGCTTCCTTGGTCTTTGGGGGTAGATGGATTCCAAGATTTGCCATTAAAACTAAACGAAGTGGAACCTAT AGTTTCGCTTCTAAAAAAACCCATGAAGTTTTAAGAGAAATTAGAAAACATGTTGATGCTGACCGCATGGTACGTTCGTT AGGGGTTTGGGACGTAATCAAACGAGGAGTAATGAGCATTTTCAAGCGTAAAGCTAAATAA
Upstream 100 bases:
>100_bases ATTAAGTCTGGGCTATGGCCTAGGCTTTTTTTATTAAAATTTTTGGTGAAATGTACCTTAAGTATTATAATTGGATAAAA AGAAGAATGGAGTAATTTGA
Downstream 100 bases:
>100_bases TAATTAAATAATCATTTGAAACTATGCTAAAAAGCGATTTGAGACGACCTGATTAAAGCAAGTCTAAAAAATATTTGGAC GAGGGACGGAAAGATGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MAQSINTKADLVIDATSFLGMGDYGKIMIGDHGFEFFDNRNVENFIQIPWEEVDTVIASLVFGGRWIPRFAIKTKRSGTY SFASKKTHEVLREIRKHVDADRMVRSLGVWDVIKRGVMSIFKRKAK
Sequences:
>Translated_126_residues MAQSINTKADLVIDATSFLGMGDYGKIMIGDHGFEFFDNRNVENFIQIPWEEVDTVIASLVFGGRWIPRFAIKTKRSGTY SFASKKTHEVLREIRKHVDADRMVRSLGVWDVIKRGVMSIFKRKAK >Mature_125_residues AQSINTKADLVIDATSFLGMGDYGKIMIGDHGFEFFDNRNVENFIQIPWEEVDTVIASLVFGGRWIPRFAIKTKRSGTYS FASKKTHEVLREIRKHVDADRMVRSLGVWDVIKRGVMSIFKRKAK
Specific function: Unknown
COG id: COG4687
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14441; Mature: 14310
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSINTKADLVIDATSFLGMGDYGKIMIGDHGFEFFDNRNVENFIQIPWEEVDTVIASL CCCCCCCCCCEEEEHHHHCCCCCCCEEEECCCCCHHHCCCCHHHHHCCCHHHHHHHHHHH VFGGRWIPRFAIKTKRSGTYSFASKKTHEVLREIRKHVDADRMVRSLGVWDVIKRGVMSI HHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH FKRKAK HHHCCC >Mature Secondary Structure AQSINTKADLVIDATSFLGMGDYGKIMIGDHGFEFFDNRNVENFIQIPWEEVDTVIASL CCCCCCCCCEEEEHHHHCCCCCCCEEEECCCCCHHHCCCCHHHHHCCCHHHHHHHHHHH VFGGRWIPRFAIKTKRSGTYSFASKKTHEVLREIRKHVDADRMVRSLGVWDVIKRGVMSI HHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH FKRKAK HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA