| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493187
Identifier: 116493187
GI number: 116493187
Start: 1423095
End: 1423508
Strand: Reverse
Name: 116493187
Synonym: PEPE_1449
Alternate gene names: NA
Gene position: 1423508-1423095 (Counterclockwise)
Preceding gene: 116493188
Following gene: 116493186
Centisome position: 77.69
GC content: 40.1
Gene sequence:
>414_bases ATGACACAAGAAAATGAATTTGAAGACGTAGAAATGACGTTAGGCGAACCAGAATTTAATGCGATGTTGATGCAAATGAC GCATGAGGTAAACGCTAGCAATGCGTCAGAATATAACTTTATGGGTAATACAACCCAAGAAGTTGGGGAAAATGTATGGG CAGTTCCAGCTTATTTAAGTGACGAATATGCGCTATTCTTTCTATATACAGAAATTGATACCGGCGATTGGGTCCTAGCC TTTTCCGAAGCAGATTTAGGTGAAGGGCAGTTTAATCTAGGAACTCCAATGACAACGGGTGAAGGCTTAAACAAATTATT CGAACAAGATCCCGATCGTGCCAAAATGGTATTGAGTTTTGTTAATGATATGGAAAAAGCTGGCGAAGGTATGTGGCGCA TGGTGGAACAATAA
Upstream 100 bases:
>100_bases TATTGATGAAAAGGTTAGTTTTACAGCAGAATTACCAGATGATTTAAAGCAAATCGGGATGGAAGAGTAGCATAATTGCA GTTTCAGATAGGAGAACAAA
Downstream 100 bases:
>100_bases AATTTTACATTTAAAAAGAGCGGACTATGGGGAGCGAATTAACGTAAGTTTCTTCTAAGAAGCTCTTTTTTTGTACCAAC TTTTTGAATATATTTTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MTQENEFEDVEMTLGEPEFNAMLMQMTHEVNASNASEYNFMGNTTQEVGENVWAVPAYLSDEYALFFLYTEIDTGDWVLA FSEADLGEGQFNLGTPMTTGEGLNKLFEQDPDRAKMVLSFVNDMEKAGEGMWRMVEQ
Sequences:
>Translated_137_residues MTQENEFEDVEMTLGEPEFNAMLMQMTHEVNASNASEYNFMGNTTQEVGENVWAVPAYLSDEYALFFLYTEIDTGDWVLA FSEADLGEGQFNLGTPMTTGEGLNKLFEQDPDRAKMVLSFVNDMEKAGEGMWRMVEQ >Mature_136_residues TQENEFEDVEMTLGEPEFNAMLMQMTHEVNASNASEYNFMGNTTQEVGENVWAVPAYLSDEYALFFLYTEIDTGDWVLAF SEADLGEGQFNLGTPMTTGEGLNKLFEQDPDRAKMVLSFVNDMEKAGEGMWRMVEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15538; Mature: 15407
Theoretical pI: Translated: 3.54; Mature: 3.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQENEFEDVEMTLGEPEFNAMLMQMTHEVNASNASEYNFMGNTTQEVGENVWAVPAYLS CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCEEECEEEEC DEYALFFLYTEIDTGDWVLAFSEADLGEGQFNLGTPMTTGEGLNKLFEQDPDRAKMVLSF CCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH VNDMEKAGEGMWRMVEQ HHHHHHHCCHHHHHHCC >Mature Secondary Structure TQENEFEDVEMTLGEPEFNAMLMQMTHEVNASNASEYNFMGNTTQEVGENVWAVPAYLS CCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCEEECEEEEC DEYALFFLYTEIDTGDWVLAFSEADLGEGQFNLGTPMTTGEGLNKLFEQDPDRAKMVLSF CCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH VNDMEKAGEGMWRMVEQ HHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA