Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493105

Identifier: 116493105

GI number: 116493105

Start: 1345666

End: 1346043

Strand: Reverse

Name: 116493105

Synonym: PEPE_1359

Alternate gene names: NA

Gene position: 1346043-1345666 (Counterclockwise)

Preceding gene: 116493106

Following gene: 116493103

Centisome position: 73.46

GC content: 32.54

Gene sequence:

>378_bases
ATGAAAAGAGCTCTTTCAATTATTGCAATAGTATTTGTTTTTATAGCAATCTTTTTGGGTTTTAGGTATTACCAAGATAC
TTACCAAAGTACTGAAGCTTACACTATGATTCCAGAAAAAGTTCCGCCTAAGGTACAAACTAAAGATGATTCAGGCAAAG
TAATCGTTGGTAGCTATTCATATAATTATAAATTTAAGTTTGTGACCAAATCTGGTAAAGAACAAACTATGAAGTATGAA
TTAAATGGGGAAAACGTCAAACCCTTTAAGCCAGGGGCTTATGCCAAGGCTGAGATTAGCAAAACGAGAATCAACAAGGG
ACCTAATTATGTGAATAAGAATGAAGTTCCATCAAAAGCGTTAGAAAAATTAAATTAA

Upstream 100 bases:

>100_bases
TAATTGGCGTGTTATTATTAAGTTTGATTGTTTAACTTAAAGGCATTAAAATAGCTATCTCACCACGTTTCCCGTAAACT
GTAAGTGGGAGGTGGATTAA

Downstream 100 bases:

>100_bases
GACAATAAAAAAGAATTTTCCATCCAAAGGAAAATTCTTTTTTTGATTTAGATTGTGTAACGTAATTTAGCAATAACCTT
ATCGTTAAGTTTATCTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKRALSIIAIVFVFIAIFLGFRYYQDTYQSTEAYTMIPEKVPPKVQTKDDSGKVIVGSYSYNYKFKFVTKSGKEQTMKYE
LNGENVKPFKPGAYAKAEISKTRINKGPNYVNKNEVPSKALEKLN

Sequences:

>Translated_125_residues
MKRALSIIAIVFVFIAIFLGFRYYQDTYQSTEAYTMIPEKVPPKVQTKDDSGKVIVGSYSYNYKFKFVTKSGKEQTMKYE
LNGENVKPFKPGAYAKAEISKTRINKGPNYVNKNEVPSKALEKLN
>Mature_125_residues
MKRALSIIAIVFVFIAIFLGFRYYQDTYQSTEAYTMIPEKVPPKVQTKDDSGKVIVGSYSYNYKFKFVTKSGKEQTMKYE
LNGENVKPFKPGAYAKAEISKTRINKGPNYVNKNEVPSKALEKLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14281; Mature: 14281

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRALSIIAIVFVFIAIFLGFRYYQDTYQSTEAYTMIPEKVPPKVQTKDDSGKVIVGSYS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEECC
YNYKFKFVTKSGKEQTMKYELNGENVKPFKPGAYAKAEISKTRINKGPNYVNKNEVPSKA
CEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
LEKLN
HHHCC
>Mature Secondary Structure
MKRALSIIAIVFVFIAIFLGFRYYQDTYQSTEAYTMIPEKVPPKVQTKDDSGKVIVGSYS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEEEECC
YNYKFKFVTKSGKEQTMKYELNGENVKPFKPGAYAKAEISKTRINKGPNYVNKNEVPSKA
CEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHH
LEKLN
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA