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The map label for this gene is dedA [H]

Identifier: 116492973

GI number: 116492973

Start: 1216315

End: 1216959

Strand: Direct

Name: dedA [H]

Synonym: PEPE_1225

Alternate gene names: 116492973

Gene position: 1216315-1216959 (Clockwise)

Preceding gene: 116492971

Following gene: 116492995

Centisome position: 66.38

GC content: 37.67

Gene sequence:

>645_bases
TTGCAAGTTCTCATTGATTTTGTTTTACACATTGATTCTCACTTAGTAACCATTGTAAATAGTTTCGGAGATTTAACCTA
TTTACTCCTTTTTGCAATTATTTTTATTGAAACTGGGGCTGTAATTCTCCCCTTCCTGCCTGGCGACTCACTTTTATTCG
CAGCTACCGCCCTTTCCGCAAAACCTGAATACGGACTACACGTTTGGATTTTTGTCGGGCTTTTCTGCCTAGCCGCTTTA
TTAGGAGATTCCTTAAACTTTTATCTAGGTAGACACGTTGGTATGGCATTAAGAAAACACCGTTTCTTTGGTAAATTCAT
TAGTGATGAAAAAATGGCTGAGGCTGAGCACTTTTTCGAAAAACACGGTAACATCTCAATTACTTTAGCACGTTTCATGC
CAATCATTCGAACTTTCGCTCCATTTGTTGCTGCTGGTTCTAATATGCCTTATAAAGATTTCATCCGTTACAATATTATT
GGAAATGTAGCTTGGGTTGCAATTTGCTGTAGTGCTGGATATTTCTTTGGTAACATCGCATTTGTAAAAGAGCATTTCTC
ACTCGTAGTAATCGGAATCATTGTGGTTTCCCTAATTCCAGCTATTGTTTCCTTTGCCAAATCAAAAATAAAAAAGCAGG
TCTAG

Upstream 100 bases:

>100_bases
CAATACTTAATTTTACGGTAATATTCTTTTAAATACAAAATACTCTTTAGAATATGTAATAATATATAAGATACGTTCAT
AATTTGAAAGGAATGATATT

Downstream 100 bases:

>100_bases
TTGACCTGCTTTTTTACTACCCAAAATGAAATGGCTAAATATAACTCCAATAAACCGAACAAGAAAACAAAACAAATTGT
AAAAAAGTTATCTGTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MQVLIDFVLHIDSHLVTIVNSFGDLTYLLLFAIIFIETGAVILPFLPGDSLLFAATALSAKPEYGLHVWIFVGLFCLAAL
LGDSLNFYLGRHVGMALRKHRFFGKFISDEKMAEAEHFFEKHGNISITLARFMPIIRTFAPFVAAGSNMPYKDFIRYNII
GNVAWVAICCSAGYFFGNIAFVKEHFSLVVIGIIVVSLIPAIVSFAKSKIKKQV

Sequences:

>Translated_214_residues
MQVLIDFVLHIDSHLVTIVNSFGDLTYLLLFAIIFIETGAVILPFLPGDSLLFAATALSAKPEYGLHVWIFVGLFCLAAL
LGDSLNFYLGRHVGMALRKHRFFGKFISDEKMAEAEHFFEKHGNISITLARFMPIIRTFAPFVAAGSNMPYKDFIRYNII
GNVAWVAICCSAGYFFGNIAFVKEHFSLVVIGIIVVSLIPAIVSFAKSKIKKQV
>Mature_214_residues
MQVLIDFVLHIDSHLVTIVNSFGDLTYLLLFAIIFIETGAVILPFLPGDSLLFAATALSAKPEYGLHVWIFVGLFCLAAL
LGDSLNFYLGRHVGMALRKHRFFGKFISDEKMAEAEHFFEKHGNISITLARFMPIIRTFAPFVAAGSNMPYKDFIRYNII
GNVAWVAICCSAGYFFGNIAFVKEHFSLVVIGIIVVSLIPAIVSFAKSKIKKQV

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=204, Percent_Identity=45.5882352941176, Blast_Score=181, Evalue=3e-47,
Organism=Escherichia coli, GI1789384, Length=194, Percent_Identity=29.8969072164948, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1789481, Length=163, Percent_Identity=32.5153374233129, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23799; Mature: 23799

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLIDFVLHIDSHLVTIVNSFGDLTYLLLFAIIFIETGAVILPFLPGDSLLFAATALSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCC
KPEYGLHVWIFVGLFCLAALLGDSLNFYLGRHVGMALRKHRFFGKFISDEKMAEAEHFFE
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
KHGNISITLARFMPIIRTFAPFVAAGSNMPYKDFIRYNIIGNVAWVAICCSAGYFFGNIA
HCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FVKEHFSLVVIGIIVVSLIPAIVSFAKSKIKKQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQVLIDFVLHIDSHLVTIVNSFGDLTYLLLFAIIFIETGAVILPFLPGDSLLFAATALSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCC
KPEYGLHVWIFVGLFCLAALLGDSLNFYLGRHVGMALRKHRFFGKFISDEKMAEAEHFFE
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
KHGNISITLARFMPIIRTFAPFVAAGSNMPYKDFIRYNIIGNVAWVAICCSAGYFFGNIA
HCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FVKEHFSLVVIGIIVVSLIPAIVSFAKSKIKKQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]