| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is spxA [H]
Identifier: 116492968
GI number: 116492968
Start: 1207089
End: 1207487
Strand: Reverse
Name: spxA [H]
Synonym: PEPE_1207
Alternate gene names: 116492968
Gene position: 1207487-1207089 (Counterclockwise)
Preceding gene: 116492969
Following gene: 116492967
Centisome position: 65.9
GC content: 35.84
Gene sequence:
>399_bases ATGGTTATTTTATACACATCACCAAGTTGTACTTCGTGTCGAAAAGCAAAAGCGTGGTTGAAAGAACACAGAATTGATTT TACAGAAAGAAATATCTTTTCTGAACCCTTAAGTGCCGAAGAAATTAAAAGAGTTCTTCGGATGACTGAGAATGGTACGG AAGAAATTATTTCTCGCCGCTCTAAAGTTTTCCAAGAGTTAAATGTTGATTTGGACGATTTACCACTCCAACAACTTATT AATTTAATTGAAGAAAATCCTGGATTGCTTCGACGTCCAATTATCATGGATGACAAACGACTTCAAGTTGGTTATAACGA AGATGAAATTCGTCGTTTCTTACCACGAAAAGTACGTCAACTGGAATTGGCAAAAGCACAAAGTATCGCAAACCTTTAA
Upstream 100 bases:
>100_bases GAAAAAAGGTTAACGGAGGGGTGGACAAAAGCTAAATAACATTGTACAATTTTAATTACAGGTTAAGTAATGTTACAGGT CACCAAAGGGGGAATTTAAT
Downstream 100 bases:
>100_bases AATAGAAAAAGAATCACTTTGGGTTTACAAGGCTCCACAGTAACTCGAAATGATTCTTTTTATTTTGGGTGACCTGAAAC GGACAGGTGGTATTGTCTTA
Product: arsenate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MVILYTSPSCTSCRKAKAWLKEHRIDFTERNIFSEPLSAEEIKRVLRMTENGTEEIISRRSKVFQELNVDLDDLPLQQLI NLIEENPGLLRRPIIMDDKRLQVGYNEDEIRRFLPRKVRQLELAKAQSIANL
Sequences:
>Translated_132_residues MVILYTSPSCTSCRKAKAWLKEHRIDFTERNIFSEPLSAEEIKRVLRMTENGTEEIISRRSKVFQELNVDLDDLPLQQLI NLIEENPGLLRRPIIMDDKRLQVGYNEDEIRRFLPRKVRQLELAKAQSIANL >Mature_132_residues MVILYTSPSCTSCRKAKAWLKEHRIDFTERNIFSEPLSAEEIKRVLRMTENGTEEIISRRSKVFQELNVDLDDLPLQQLI NLIEENPGLLRRPIIMDDKRLQVGYNEDEIRRFLPRKVRQLELAKAQSIANL
Specific function: Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes invo
COG id: COG1393
COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArsC family. Spx subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006660 - InterPro: IPR012336 - InterPro: IPR012335 - InterPro: IPR006504 [H]
Pfam domain/function: PF03960 ArsC [H]
EC number: NA
Molecular weight: Translated: 15508; Mature: 15508
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVILYTSPSCTSCRKAKAWLKEHRIDFTERNIFSEPLSAEEIKRVLRMTENGTEEIISRR CEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH SKVFQELNVDLDDLPLQQLINLIEENPGLLRRPIIMDDKRLQVGYNEDEIRRFLPRKVRQ HHHHHHHCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCEECCCCHHHHHHHHHHHHHH LELAKAQSIANL HHHHHHHHHCCC >Mature Secondary Structure MVILYTSPSCTSCRKAKAWLKEHRIDFTERNIFSEPLSAEEIKRVLRMTENGTEEIISRR CEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHH SKVFQELNVDLDDLPLQQLINLIEENPGLLRRPIIMDDKRLQVGYNEDEIRRFLPRKVRQ HHHHHHHCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCEECCCCHHHHHHHHHHHHHH LELAKAQSIANL HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]