Click here to switch to the map view.

The map label for this gene is 116492934

Identifier: 116492934

GI number: 116492934

Start: 1173949

End: 1174290

Strand: Reverse

Name: 116492934

Synonym: PEPE_1173

Alternate gene names: NA

Gene position: 1174290-1173949 (Counterclockwise)

Preceding gene: 116492935

Following gene: 116492933

Centisome position: 64.09

GC content: 30.99

Gene sequence:

>342_bases
ATGGCTTTTACTAAAGAAGTGAATGTTAAGGGCGATAATGTCATTTACACGTTAAATGCTAATATAAAAAAATATACTTT
ATTAGACTTAGGATTCACAACTAAGAATAATGGGACATTCGTTTTAGAACGTTCGTTAGATTCAACTTCACCCTTTAACC
AAGGGATTAAATTAAAGATAATGATTAAACCAGATTTCTCTGGATTTAAAATGAGTACAACCACAGCTAATGGAATGCAA
AGTGTTAACATTTTTAGTCGGGAACAGGATGCACCATTAGTTGAACAGTACCATTTTTTGATTCAAGAATTACTTGAAAG
AGAAGTATTGGCTAAAAAATAG

Upstream 100 bases:

>100_bases
AAAGACTACGGAAGAAGATATTGAGTATCTGTGTGATCAGATTGTAGCAATTGAACAACGATTAAAACAAATAAGCAATA
AATAGAAGCGAGGGGTTCAG

Downstream 100 bases:

>100_bases
TTACTAACTTTTTGTTAATGGTGGAATTTAATAAGTGTTTGGTATAAAATGGATTTTACTGGATTTATGCGACCTTCAAT
CGTAGATTCTCCAGAATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAFTKEVNVKGDNVIYTLNANIKKYTLLDLGFTTKNNGTFVLERSLDSTSPFNQGIKLKIMIKPDFSGFKMSTTTANGMQ
SVNIFSREQDAPLVEQYHFLIQELLEREVLAKK

Sequences:

>Translated_113_residues
MAFTKEVNVKGDNVIYTLNANIKKYTLLDLGFTTKNNGTFVLERSLDSTSPFNQGIKLKIMIKPDFSGFKMSTTTANGMQ
SVNIFSREQDAPLVEQYHFLIQELLEREVLAKK
>Mature_112_residues
AFTKEVNVKGDNVIYTLNANIKKYTLLDLGFTTKNNGTFVLERSLDSTSPFNQGIKLKIMIKPDFSGFKMSTTTANGMQS
VNIFSREQDAPLVEQYHFLIQELLEREVLAKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12826; Mature: 12695

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFTKEVNVKGDNVIYTLNANIKKYTLLDLGFTTKNNGTFVLERSLDSTSPFNQGIKLKI
CCCCCCCCCCCCCEEEEEECCCEEEEEEEECEEECCCCEEEEEECCCCCCCCCCCCEEEE
MIKPDFSGFKMSTTTANGMQSVNIFSREQDAPLVEQYHFLIQELLEREVLAKK
EECCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AFTKEVNVKGDNVIYTLNANIKKYTLLDLGFTTKNNGTFVLERSLDSTSPFNQGIKLKI
CCCCCCCCCCCCEEEEEECCCEEEEEEEECEEECCCCEEEEEECCCCCCCCCCCCEEEE
MIKPDFSGFKMSTTTANGMQSVNIFSREQDAPLVEQYHFLIQELLEREVLAKK
EECCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA