| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is suhB [H]
Identifier: 116492918
GI number: 116492918
Start: 1156541
End: 1157326
Strand: Reverse
Name: suhB [H]
Synonym: PEPE_1157
Alternate gene names: 116492918
Gene position: 1157326-1156541 (Counterclockwise)
Preceding gene: 116492919
Following gene: 116492917
Centisome position: 63.16
GC content: 37.28
Gene sequence:
>786_bases ATGAAAAATATAGATAAAGATTTCTTACTTCAATTAGACGCCAAAATAGTGGAATTTCTAGTCAAAGATCGTCAATTTAT TTTTGAAAAGATGGGAAAGCATTTGGAAGTTGATGAAAAACAAAACCGCCGAGATTTGGTAACTGAAGTGGATCGTGGTA ATCAAGCTCACATTATTGAAGCGTTAAGTCAATTACTCCCTGATGCTAAAATTTTAGCTGAGGAATCTGAAAATGATTTA ACTGATGCCAAGGGGTTGATGTGGGTCATTGATCCAATTGATGGGACCATGAATTTTGTTAAGCAACGTGAAGATTTTGC TGTAATGATCGCTCTATATGAAGATGGAAAACCTTTGTTGGGATATATTTACGATGTCATGCGCGATGTTTTATTACATG GCGGACCGGGAATTGGAGTGGTATATAAAAATCAAGATGTAATCAATCCTCCAGCCAATCTAGCTCTAGAAGAAAGTTTA ATCGGGTTAAGTGGCCCAATGCTAGTTAATAATGCATATCACTTCCAAGACGTTGAAAAAAGAACGCTAGGAGCTAGAGT TATTGGCAGTGCAGGAATCGAATTTATTCGAGTACTTTTGGGTAAACAAATTGGATATGTTTCTAGCTTAAAACCATGGG ATTTTGCTGCTGGAAACGCTTTAGCGGCGGTCTTTGGGTTAAAAGTAGGGTATGTTGACGGAGAGGCTATTAATGTGCTA AAATCGGGCGTTGTACTAGTTGCTACGAAAAAAGCATATTCTGCTATAATGAGTATAGTGAAATAG
Upstream 100 bases:
>100_bases AGACTTTTTAGGGAATTTTTAAGTAATTCTGGTATGGAACCATTTTTAGCGGTTAAACAATTAAAAGATTTAAATATTAA AAAAATTAAGGTGATTGAAA
Downstream 100 bases:
>100_bases CATTATGCTGTGACGAATTAGACGTCACAGGTTTTTTTATGTTAAGCCATTGAAAAACGAAAGGGAGAAACATATTGAAT TTAAGAGACGATATTAGAAA
Product: fructose-1 6-bisphosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKNIDKDFLLQLDAKIVEFLVKDRQFIFEKMGKHLEVDEKQNRRDLVTEVDRGNQAHIIEALSQLLPDAKILAEESENDL TDAKGLMWVIDPIDGTMNFVKQREDFAVMIALYEDGKPLLGYIYDVMRDVLLHGGPGIGVVYKNQDVINPPANLALEESL IGLSGPMLVNNAYHFQDVEKRTLGARVIGSAGIEFIRVLLGKQIGYVSSLKPWDFAAGNALAAVFGLKVGYVDGEAINVL KSGVVLVATKKAYSAIMSIVK
Sequences:
>Translated_261_residues MKNIDKDFLLQLDAKIVEFLVKDRQFIFEKMGKHLEVDEKQNRRDLVTEVDRGNQAHIIEALSQLLPDAKILAEESENDL TDAKGLMWVIDPIDGTMNFVKQREDFAVMIALYEDGKPLLGYIYDVMRDVLLHGGPGIGVVYKNQDVINPPANLALEESL IGLSGPMLVNNAYHFQDVEKRTLGARVIGSAGIEFIRVLLGKQIGYVSSLKPWDFAAGNALAAVFGLKVGYVDGEAINVL KSGVVLVATKKAYSAIMSIVK >Mature_261_residues MKNIDKDFLLQLDAKIVEFLVKDRQFIFEKMGKHLEVDEKQNRRDLVTEVDRGNQAHIIEALSQLLPDAKILAEESENDL TDAKGLMWVIDPIDGTMNFVKQREDFAVMIALYEDGKPLLGYIYDVMRDVLLHGGPGIGVVYKNQDVINPPANLALEESL IGLSGPMLVNNAYHFQDVEKRTLGARVIGSAGIEFIRVLLGKQIGYVSSLKPWDFAAGNALAAVFGLKVGYVDGEAINVL KSGVVLVATKKAYSAIMSIVK
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=250, Percent_Identity=26.4, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1788882, Length=190, Percent_Identity=31.5789473684211, Blast_Score=83, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193202572, Length=230, Percent_Identity=28.695652173913, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI193202570, Length=235, Percent_Identity=28.5106382978723, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320493, Length=130, Percent_Identity=32.3076923076923, Blast_Score=69, Evalue=6e-13, Organism=Drosophila melanogaster, GI24664922, Length=236, Percent_Identity=29.6610169491525, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI24664926, Length=247, Percent_Identity=25.9109311740891, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI21357329, Length=231, Percent_Identity=25.974025974026, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21357957, Length=272, Percent_Identity=26.1029411764706, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28833; Mature: 28833
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00629 IMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIDKDFLLQLDAKIVEFLVKDRQFIFEKMGKHLEVDEKQNRRDLVTEVDRGNQAHIIE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHH ALSQLLPDAKILAEESENDLTDAKGLMWVIDPIDGTMNFVKQREDFAVMIALYEDGKPLL HHHHHCCCHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCEEEEEEEECCCCHHH GYIYDVMRDVLLHGGPGIGVVYKNQDVINPPANLALEESLIGLSGPMLVNNAYHFQDVEK HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHH RTLGARVIGSAGIEFIRVLLGKQIGYVSSLKPWDFAAGNALAAVFGLKVGYVDGEAINVL HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHEEECCCCHHHHHH KSGVVLVATKKAYSAIMSIVK HCCEEEEEEHHHHHHHHHHHC >Mature Secondary Structure MKNIDKDFLLQLDAKIVEFLVKDRQFIFEKMGKHLEVDEKQNRRDLVTEVDRGNQAHIIE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHH ALSQLLPDAKILAEESENDLTDAKGLMWVIDPIDGTMNFVKQREDFAVMIALYEDGKPLL HHHHHCCCHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCEEEEEEEECCCCHHH GYIYDVMRDVLLHGGPGIGVVYKNQDVINPPANLALEESLIGLSGPMLVNNAYHFQDVEK HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHH RTLGARVIGSAGIEFIRVLLGKQIGYVSSLKPWDFAAGNALAAVFGLKVGYVDGEAINVL HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHEEECCCCHHHHHH KSGVVLVATKKAYSAIMSIVK HCCEEEEEEHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969500; 9384377 [H]