| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is ylaO [H]
Identifier: 116492916
GI number: 116492916
Start: 1153312
End: 1154520
Strand: Reverse
Name: ylaO [H]
Synonym: PEPE_1155
Alternate gene names: 116492916
Gene position: 1154520-1153312 (Counterclockwise)
Preceding gene: 116492917
Following gene: 116492915
Centisome position: 63.01
GC content: 33.42
Gene sequence:
>1209_bases ATGCAAAAATTTTTATATTGGTTTCCAAGGCGATTTAAAGAGCGATTGCCGTATCTAGATTTATGGGTAATAATCCCATA TCTTATACTTAGTATTTTTGGAATTGTAATGGTCTACTCAGCCAGTGCTGATTTTTATATCCAGAATGGAATTAGCGCTA AAAGTTATCTGTTAAAACAAGCAGTTTGGGTAATGGTTGGAATTGTAATCATGATGTTCTTTTTTTTGATTAACAAAAAA GGTTTTAGGAATAAAGGTATATTAAAAATTGGTGCATTAGTTATGTACGCAGCGTCTTTTTTTCTTATATTTTTTGGTTC GAATACAAATGGAGCTACTGGATGGATCTATATTGGATCTTTTGGGATCCAACCGGCTGAATATTTGAAGTTATTTATTA TTTTGTATTTATCAAATATTTTGTCACTACATCAACATCGGATTGAATTAGGAGAAGAAATTTCTCCTAAGGTAACGTGG AGTCCAATGGTTATGATTGGTTCGCTAATTTTATTGAACTTTTTACAACATGATTTAGGAGGTTCAACGATTAATGCGGC AATTGCAATTGTAATTTTGTTTGCAGGTGGTAAAAATTATCGTAAAAGTGTTGCGGGAATATTTGCTGGATTAGCAGCAT TTTTTATACTATTAACTACAGTTGCTTCGAAAATTGATGTGCATACCTCAAATTATATGCTTCAACGTTTGGTAGGATTT GCGCATCCTTTTGAACTTTCTAAAGGTGCCGGTAATCAGTTGGTTAATTCATATTACGCACTCGGTAATGGTGGGATTTT TGGTGTTGGTTTAGGAAATAGTATTCAAAAGAAGGGATATTTACCCGAAGCTAATACTGATTTTATTATGTCGGTAATTG CTGAGGAATTGGGTTTGATTATGGTTGTAATTATCATTTCGATCCTATTTGTCATTATTTTCAGAGCAATTATTCTTGGT ACTAGGTCCAGTAAAATGTATGATGCTCTTGTTTGTTATGGTATTGCAACTTATCTAGTTGTTCAAACTTTCTTCAATGT TGGTGGAATAACTGGTTTGATACCAATTACAGGGGTTACGTTCCCTTTCATTAGTTATGGTGGTTCAAGTATGATGGTTT TATCGGCTACCATGGGGGTACTACTAAATATAAGTGCTTCGCAAAGACAAGCACTTAATGAACAGAAACAAATCATAGAG GAAGATTAG
Upstream 100 bases:
>100_bases TAAGAAAAGACGAAAATTTAATTTTCGTCTTTTTTTATTTTTAAGGAGCGTAGTACGATATAATAGATTAGGTATTATGC AGGATAAGGGTGAAATATTA
Downstream 100 bases:
>100_bases AATGAATATAGTACAACGTCAAAGTATTATTGTATTTTTTAATAACATCAAAAAAATCGGACCCATCAAAAAAATTGGCG ATGTTGATTATGTTTCAAAA
Product: cell division membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MQKFLYWFPRRFKERLPYLDLWVIIPYLILSIFGIVMVYSASADFYIQNGISAKSYLLKQAVWVMVGIVIMMFFFLINKK GFRNKGILKIGALVMYAASFFLIFFGSNTNGATGWIYIGSFGIQPAEYLKLFIILYLSNILSLHQHRIELGEEISPKVTW SPMVMIGSLILLNFLQHDLGGSTINAAIAIVILFAGGKNYRKSVAGIFAGLAAFFILLTTVASKIDVHTSNYMLQRLVGF AHPFELSKGAGNQLVNSYYALGNGGIFGVGLGNSIQKKGYLPEANTDFIMSVIAEELGLIMVVIIISILFVIIFRAIILG TRSSKMYDALVCYGIATYLVVQTFFNVGGITGLIPITGVTFPFISYGGSSMMVLSATMGVLLNISASQRQALNEQKQIIE ED
Sequences:
>Translated_402_residues MQKFLYWFPRRFKERLPYLDLWVIIPYLILSIFGIVMVYSASADFYIQNGISAKSYLLKQAVWVMVGIVIMMFFFLINKK GFRNKGILKIGALVMYAASFFLIFFGSNTNGATGWIYIGSFGIQPAEYLKLFIILYLSNILSLHQHRIELGEEISPKVTW SPMVMIGSLILLNFLQHDLGGSTINAAIAIVILFAGGKNYRKSVAGIFAGLAAFFILLTTVASKIDVHTSNYMLQRLVGF AHPFELSKGAGNQLVNSYYALGNGGIFGVGLGNSIQKKGYLPEANTDFIMSVIAEELGLIMVVIIISILFVIIFRAIILG TRSSKMYDALVCYGIATYLVVQTFFNVGGITGLIPITGVTFPFISYGGSSMMVLSATMGVLLNISASQRQALNEQKQIIE ED >Mature_402_residues MQKFLYWFPRRFKERLPYLDLWVIIPYLILSIFGIVMVYSASADFYIQNGISAKSYLLKQAVWVMVGIVIMMFFFLINKK GFRNKGILKIGALVMYAASFFLIFFGSNTNGATGWIYIGSFGIQPAEYLKLFIILYLSNILSLHQHRIELGEEISPKVTW SPMVMIGSLILLNFLQHDLGGSTINAAIAIVILFAGGKNYRKSVAGIFAGLAAFFILLTTVASKIDVHTSNYMLQRLVGF AHPFELSKGAGNQLVNSYYALGNGGIFGVGLGNSIQKKGYLPEANTDFIMSVIAEELGLIMVVIIISILFVIIFRAIILG TRSSKMYDALVCYGIATYLVVQTFFNVGGITGLIPITGVTFPFISYGGSSMMVLSATMGVLLNISASQRQALNEQKQIIE ED
Specific function: This Is A Septum-Peptidoglycan Biosynthetic Protein, Involved In Cell Wall Formation. Plays A Role In The Stabilization Of The Ftsz Ring During Cell Division. [C]
COG id: COG0772
COG function: function code D; Bacterial cell division membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsW/rodA/spoVE family [H]
Homologues:
Organism=Escherichia coli, GI1786277, Length=289, Percent_Identity=34.6020761245675, Blast_Score=162, Evalue=5e-41, Organism=Escherichia coli, GI1786853, Length=294, Percent_Identity=30.2721088435374, Blast_Score=114, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001182 - InterPro: IPR018365 [H]
Pfam domain/function: PF01098 FTSW_RODA_SPOVE [H]
EC number: NA
Molecular weight: Translated: 44432; Mature: 44432
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS00428 FTSW_RODA_SPOVE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKFLYWFPRRFKERLPYLDLWVIIPYLILSIFGIVMVYSASADFYIQNGISAKSYLLKQ CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH AVWVMVGIVIMMFFFLINKKGFRNKGILKIGALVMYAASFFLIFFGSNTNGATGWIYIGS HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEC FGIQPAEYLKLFIILYLSNILSLHQHRIELGEEISPKVTWSPMVMIGSLILLNFLQHDLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC GSTINAAIAIVILFAGGKNYRKSVAGIFAGLAAFFILLTTVASKIDVHTSNYMLQRLVGF CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC AHPFELSKGAGNQLVNSYYALGNGGIFGVGLGNSIQKKGYLPEANTDFIMSVIAEELGLI CCCCCCCCCCCHHHHHHHHEECCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHH MVVIIISILFVIIFRAIILGTRSSKMYDALVCYGIATYLVVQTFFNVGGITGLIPITGVT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH FPFISYGGSSMMVLSATMGVLLNISASQRQALNEQKQIIEED HHHHHCCCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQKFLYWFPRRFKERLPYLDLWVIIPYLILSIFGIVMVYSASADFYIQNGISAKSYLLKQ CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH AVWVMVGIVIMMFFFLINKKGFRNKGILKIGALVMYAASFFLIFFGSNTNGATGWIYIGS HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEC FGIQPAEYLKLFIILYLSNILSLHQHRIELGEEISPKVTWSPMVMIGSLILLNFLQHDLG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC GSTINAAIAIVILFAGGKNYRKSVAGIFAGLAAFFILLTTVASKIDVHTSNYMLQRLVGF CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC AHPFELSKGAGNQLVNSYYALGNGGIFGVGLGNSIQKKGYLPEANTDFIMSVIAEELGLI CCCCCCCCCCCHHHHHHHHEECCCCEEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHH MVVIIISILFVIIFRAIILGTRSSKMYDALVCYGIATYLVVQTFFNVGGITGLIPITGVT HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCH FPFISYGGSSMMVLSATMGVLLNISASQRQALNEQKQIIEED HHHHHCCCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]