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The map label for this gene is ydiA [C]

Identifier: 116492872

GI number: 116492872

Start: 1108252

End: 1109061

Strand: Direct

Name: ydiA [C]

Synonym: PEPE_1110

Alternate gene names: 116492872

Gene position: 1108252-1109061 (Clockwise)

Preceding gene: 116492857

Following gene: 116492879

Centisome position: 60.48

GC content: 37.28

Gene sequence:

>810_bases
ATGGAAAAACAAAAAAAATCAATTAATATTTACATTCTTTCAGATTCTGTCGGTGATACGGGTGATCAAGTCGCTCATGC
AGCAGCCGCTCAATTTCTAGATGTGGAATTTAATTTTGCTCGTCATCCGTTTATTCATACAATCTCTTTACTAGATAGTA
TTTTGAATAAAGCCGTCCGTGAAGATGCAATGGTTTTTTCCACCTTTGTAAATCCGGAATTGAATCAATATGCTGCCGAT
TTTTGTAACCAAAACACTTTAAAATATTTGGACGTATTGACTCCGGCAGTGAATTTATTTGCTGAAAAAACTAATCTCGC
CCCTGAAAATAAACCTGGACGCACCCACTCACTAAATGCAAAATACTTCGATAAGATTTCGGCAATGGAGTTTGCGGTTA
CCTATGATGATGGAAAAGACCCTGCTGGCTTCTTAAAAGCTGATATTGTCCTCTTAGGGGTGTCTCGAACCTCTAAGACA
CCTCTTTCACTCTACCTTGCTAACAAGGGCTACAAGGTCGCTAATTTGCCTCTGGTACCTCAAACTCAAATTCCAGATGA
AATTTGGCAGGTAGACTCTAATAAGATTTTTGGACTAACTACCACTAAAGAAGTTTTAAATAATATTCGTCGGCAGCGCA
TGATTGCTTACGGTTTAAATCCAGAATCGTCCTATTCTAATATGGATAGTATCAATAAGGAACTTCAATCTGCAGACGAA
CTCTTTAAAAAAATTGGTTGTTTAGTAATTAATACTGCTAATAAATCCATCGAGGAGACCGCCACAATTATTATGGAAAG
TCTCGTATAA

Upstream 100 bases:

>100_bases
ATAAATAACTGTGGCGATAATTATTTATTTATCAGAAAACGTTTTCTAACTTAAAGCAACTATGTTAATATCATACCAAA
AGACTGAGGAGTTAAACAAT

Downstream 100 bases:

>100_bases
AACCAAAAAATGTCATAAGGCACCGAGATAAATATCTCGTTATCACATTGCCCTATGACATTTTTTAATTATTGATGATT
TTTTCAATCAATGTATCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MEKQKKSINIYILSDSVGDTGDQVAHAAAAQFLDVEFNFARHPFIHTISLLDSILNKAVREDAMVFSTFVNPELNQYAAD
FCNQNTLKYLDVLTPAVNLFAEKTNLAPENKPGRTHSLNAKYFDKISAMEFAVTYDDGKDPAGFLKADIVLLGVSRTSKT
PLSLYLANKGYKVANLPLVPQTQIPDEIWQVDSNKIFGLTTTKEVLNNIRRQRMIAYGLNPESSYSNMDSINKELQSADE
LFKKIGCLVINTANKSIEETATIIMESLV

Sequences:

>Translated_269_residues
MEKQKKSINIYILSDSVGDTGDQVAHAAAAQFLDVEFNFARHPFIHTISLLDSILNKAVREDAMVFSTFVNPELNQYAAD
FCNQNTLKYLDVLTPAVNLFAEKTNLAPENKPGRTHSLNAKYFDKISAMEFAVTYDDGKDPAGFLKADIVLLGVSRTSKT
PLSLYLANKGYKVANLPLVPQTQIPDEIWQVDSNKIFGLTTTKEVLNNIRRQRMIAYGLNPESSYSNMDSINKELQSADE
LFKKIGCLVINTANKSIEETATIIMESLV
>Mature_269_residues
MEKQKKSINIYILSDSVGDTGDQVAHAAAAQFLDVEFNFARHPFIHTISLLDSILNKAVREDAMVFSTFVNPELNQYAAD
FCNQNTLKYLDVLTPAVNLFAEKTNLAPENKPGRTHSLNAKYFDKISAMEFAVTYDDGKDPAGFLKADIVLLGVSRTSKT
PLSLYLANKGYKVANLPLVPQTQIPDEIWQVDSNKIFGLTTTKEVLNNIRRQRMIAYGLNPESSYSNMDSINKELQSADE
LFKKIGCLVINTANKSIEETATIIMESLV

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family

Homologues:

Organism=Escherichia coli, GI1787995, Length=278, Percent_Identity=29.4964028776978, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1110_PEDPA (Q03F57)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804607.1
- STRING:   Q03F57
- GeneID:   4417045
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_1110
- NMPDR:   fig|278197.10.peg.974
- eggNOG:   COG1806
- HOGENOM:   HBG304855
- OMA:   AMEFAVM
- PhylomeDB:   Q03F57
- ProtClustDB:   PRK05339
- BioCyc:   PPEN278197:PEPE_1110-MONOMER
- HAMAP:   MF_01062
- InterPro:   IPR005177

Pfam domain/function: PF03618 DUF299

EC number: NA

Molecular weight: Translated: 29964; Mature: 29964

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQKKSINIYILSDSVGDTGDQVAHAAAAQFLDVEFNFARHPFIHTISLLDSILNKAVR
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHH
EDAMVFSTFVNPELNQYAADFCNQNTLKYLDVLTPAVNLFAEKTNLAPENKPGRTHSLNA
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCH
KYFDKISAMEFAVTYDDGKDPAGFLKADIVLLGVSRTSKTPLSLYLANKGYKVANLPLVP
HHHHHHHHEEEEEEECCCCCCCHHHEEEEEEEEECCCCCCCEEEEEECCCCEEECCCCCC
QTQIPDEIWQVDSNKIFGLTTTKEVLNNIRRQRMIAYGLNPESSYSNMDSINKELQSADE
CCCCCHHHHCCCCCEEEEEECHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHH
LFKKIGCLVINTANKSIEETATIIMESLV
HHHHHCEEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MEKQKKSINIYILSDSVGDTGDQVAHAAAAQFLDVEFNFARHPFIHTISLLDSILNKAVR
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHH
EDAMVFSTFVNPELNQYAADFCNQNTLKYLDVLTPAVNLFAEKTNLAPENKPGRTHSLNA
HHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCH
KYFDKISAMEFAVTYDDGKDPAGFLKADIVLLGVSRTSKTPLSLYLANKGYKVANLPLVP
HHHHHHHHEEEEEEECCCCCCCHHHEEEEEEEEECCCCCCCEEEEEECCCCEEECCCCCC
QTQIPDEIWQVDSNKIFGLTTTKEVLNNIRRQRMIAYGLNPESSYSNMDSINKELQSADE
CCCCCHHHHCCCCCEEEEEECHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHH
LFKKIGCLVINTANKSIEETATIIMESLV
HHHHHCEEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA