Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is 116492803

Identifier: 116492803

GI number: 116492803

Start: 1031855

End: 1032217

Strand: Direct

Name: 116492803

Synonym: PEPE_1040

Alternate gene names: NA

Gene position: 1031855-1032217 (Clockwise)

Preceding gene: 116492801

Following gene: 116492807

Centisome position: 56.31

GC content: 37.74

Gene sequence:

>363_bases
ATGCGATTATGGCATGAAAAGTTAATTTCTAAACTACCACGTGCCCAGCTTTTAGGACAGCATCGAGAAATTGCAGCCTT
ACGAGGTAACGGTTGGGGTAAAAAACATGCAACCGTTGATTATGTTTTTACTCATTCTCCTTACAAACTTTATCAATTTC
ATCGATTAGTATTAGCTGAGATGCAGTCACGAGGTTATCATCCTAACCCTAAATGGTTTGAACCAACTTTCCGTGGTTTC
CATTGTCCGCCTTATTTAGAATTATGTGCTTGCCCACTAACTTCCCCAATCTATCCAGAACATGATCAACAGTATTTAAT
TGAATGTCTGGAAAATTTAGAGTCTAAAGGAGTTCGATTATAA

Upstream 100 bases:

>100_bases
TTTAACTCAGAGGTATGTTAGTGAGAATTCATCAGTCAAGTTAGTGTTAATTATCTTTAAATTACGCTATGCTTAAATTA
AAAAACGGGGGGTCGTCTGT

Downstream 100 bases:

>100_bases
GCCAAACACCCGACGGGTTCTAATAATATATTTATAATAAAAGGCCAATTCTTACGAATTGGTCTTTTTAAGAATTATCT
TTTAATTACATATTCGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MRLWHEKLISKLPRAQLLGQHREIAALRGNGWGKKHATVDYVFTHSPYKLYQFHRLVLAEMQSRGYHPNPKWFEPTFRGF
HCPPYLELCACPLTSPIYPEHDQQYLIECLENLESKGVRL

Sequences:

>Translated_120_residues
MRLWHEKLISKLPRAQLLGQHREIAALRGNGWGKKHATVDYVFTHSPYKLYQFHRLVLAEMQSRGYHPNPKWFEPTFRGF
HCPPYLELCACPLTSPIYPEHDQQYLIECLENLESKGVRL
>Mature_120_residues
MRLWHEKLISKLPRAQLLGQHREIAALRGNGWGKKHATVDYVFTHSPYKLYQFHRLVLAEMQSRGYHPNPKWFEPTFRGF
HCPPYLELCACPLTSPIYPEHDQQYLIECLENLESKGVRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14174; Mature: 14174

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLWHEKLISKLPRAQLLGQHREIAALRGNGWGKKHATVDYVFTHSPYKLYQFHRLVLAE
CCHHHHHHHHHCCHHHHHCCHHHHEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
MQSRGYHPNPKWFEPTFRGFHCPPYLELCACPLTSPIYPEHDQQYLIECLENLESKGVRL
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRLWHEKLISKLPRAQLLGQHREIAALRGNGWGKKHATVDYVFTHSPYKLYQFHRLVLAE
CCHHHHHHHHHCCHHHHHCCHHHHEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
MQSRGYHPNPKWFEPTFRGFHCPPYLELCACPLTSPIYPEHDQQYLIECLENLESKGVRL
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA