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The map label for this gene is yurR [H]

Identifier: 116492701

GI number: 116492701

Start: 938215

End: 939309

Strand: Direct

Name: yurR [H]

Synonym: PEPE_0937

Alternate gene names: 116492701

Gene position: 938215-939309 (Clockwise)

Preceding gene: 116492700

Following gene: 116492702

Centisome position: 51.2

GC content: 38.36

Gene sequence:

>1095_bases
GTGAAAATTGCGGTTATTGGAAATGGGATTGTTGGCGCAACTTTTGTTAATGAAATTTTAGAGCGATTTCCTGCATACCA
AATTGTCCAATTTGACGGTATTAAAGGGACTGCAACGACAGCTTCTGCCGGAATTATTGCTCCTTGGTTATCTAAACGTC
GAAATAAAAAATGGTACAATTTGGCTCGTCAAGGGGCGGAATATATGTACCAAATAGCAGAAAAATACCGAATGCCTCCA
GCAGTCTATTTTAAAAGTGGCGTAATTTATACACGAGATAATAATGAAAAGATTAGTGCACTACTCACCTTAGCTAAGGA
CCGAATTAAAGACGCTCCTCAAATGGAGGGATTTCGGCGGATTGATAATGCCGAAATCAAACAACTTTTTAATTTTATCC
AAACTGAAAATAATGGAGTTTTAGTTGAGGGTGGCGCACGAATCGATGGACAAAAATTTGTTGAATTTTTGAATCAGCGC
AATCAAACAAAGTTCGAATTACGTAATGAACGAGCTGTTTTATCGAAAAATGGAACAGATACCCTGGTTAATGGCGAAAA
ATTTGATTTAATCGTCTTAGCTGTAGGTGCTTGGCTAAAAGATACTTTAAGCGATATTGGCATCGAAGCCTTAACTCGTC
CTCAAAAGGGGCAGTTAATTGAAGTAGAGCTTCCTGGGCAAGCCCAAGTTAATGCAAGTGCTCCCGTTTTAATGCCTGAA
GGTGAACGAGATTTCATTCCTACTAACCAAGGAACTTTACTCATTGGAGCTACTCATGAAAATGATCAAGGATTTGATTT
AACAGTGAGTGATCAAATTATTGATGATTTATTAGCCAGTGGACAACGAGTGATTCCTAATTTAGATAAATCGATGGTTA
AGAATACGCGCGTAGGAACACGGGCGTATACTGAGGACTTTGCACCATTCTTTGGCTATTTGCCAAATCATCCACAAATT
ATGGTAGCGTCTGGATTAGGTTCATCTGGGTTAACTACAGGTCCAATTATTGGAAAACTATTAGCTGATTTAGTAGAAAA
TCCCGAGTTGGATATGACTGATTTGACTAAACCACTGACAACATACATTAAGTAG

Upstream 100 bases:

>100_bases
CTATGGTCAAAAAGCCACTAAAAAACGTAAATTATATAATGGTGCTTTGAGAACCGATTATTTCCAATTCTGGGGTAAAC
GTGAAAGGTAGGTCTTGATA

Downstream 100 bases:

>100_bases
AGAGGTACATGGTATGAAGAAAGTAGAAAGTTTTTATTATCAGCCAGATTTTTTAAATAACATGATCAGCTGGTCATGGA
CTCTAATGATTCTGATTGTA

Product: glycine/D-amino acid oxidase (deaminating)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKIAVIGNGIVGATFVNEILERFPAYQIVQFDGIKGTATTASAGIIAPWLSKRRNKKWYNLARQGAEYMYQIAEKYRMPP
AVYFKSGVIYTRDNNEKISALLTLAKDRIKDAPQMEGFRRIDNAEIKQLFNFIQTENNGVLVEGGARIDGQKFVEFLNQR
NQTKFELRNERAVLSKNGTDTLVNGEKFDLIVLAVGAWLKDTLSDIGIEALTRPQKGQLIEVELPGQAQVNASAPVLMPE
GERDFIPTNQGTLLIGATHENDQGFDLTVSDQIIDDLLASGQRVIPNLDKSMVKNTRVGTRAYTEDFAPFFGYLPNHPQI
MVASGLGSSGLTTGPIIGKLLADLVENPELDMTDLTKPLTTYIK

Sequences:

>Translated_364_residues
MKIAVIGNGIVGATFVNEILERFPAYQIVQFDGIKGTATTASAGIIAPWLSKRRNKKWYNLARQGAEYMYQIAEKYRMPP
AVYFKSGVIYTRDNNEKISALLTLAKDRIKDAPQMEGFRRIDNAEIKQLFNFIQTENNGVLVEGGARIDGQKFVEFLNQR
NQTKFELRNERAVLSKNGTDTLVNGEKFDLIVLAVGAWLKDTLSDIGIEALTRPQKGQLIEVELPGQAQVNASAPVLMPE
GERDFIPTNQGTLLIGATHENDQGFDLTVSDQIIDDLLASGQRVIPNLDKSMVKNTRVGTRAYTEDFAPFFGYLPNHPQI
MVASGLGSSGLTTGPIIGKLLADLVENPELDMTDLTKPLTTYIK
>Mature_364_residues
MKIAVIGNGIVGATFVNEILERFPAYQIVQFDGIKGTATTASAGIIAPWLSKRRNKKWYNLARQGAEYMYQIAEKYRMPP
AVYFKSGVIYTRDNNEKISALLTLAKDRIKDAPQMEGFRRIDNAEIKQLFNFIQTENNGVLVEGGARIDGQKFVEFLNQR
NQTKFELRNERAVLSKNGTDTLVNGEKFDLIVLAVGAWLKDTLSDIGIEALTRPQKGQLIEVELPGQAQVNASAPVLMPE
GERDFIPTNQGTLLIGATHENDQGFDLTVSDQIIDDLLASGQRVIPNLDKSMVKNTRVGTRAYTEDFAPFFGYLPNHPQI
MVASGLGSSGLTTGPIIGKLLADLVENPELDMTDLTKPLTTYIK

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 40285; Mature: 40285

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAVIGNGIVGATFVNEILERFPAYQIVQFDGIKGTATTASAGIIAPWLSKRRNKKWYN
CEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHH
LARQGAEYMYQIAEKYRMPPAVYFKSGVIYTRDNNEKISALLTLAKDRIKDAPQMEGFRR
HHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHH
IDNAEIKQLFNFIQTENNGVLVEGGARIDGQKFVEFLNQRNQTKFELRNERAVLSKNGTD
CCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCEEEECCCCCC
TLVNGEKFDLIVLAVGAWLKDTLSDIGIEALTRPQKGQLIEVELPGQAQVNASAPVLMPE
CEECCCCCEEEEEEHHHHHHHHHHHCCHHHHCCCCCCCEEEEECCCCCEECCCCCEEECC
GERDFIPTNQGTLLIGATHENDQGFDLTVSDQIIDDLLASGQRVIPNLDKSMVKNTRVGT
CCCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC
RAYTEDFAPFFGYLPNHPQIMVASGLGSSGLTTGPIIGKLLADLVENPELDMTDLTKPLT
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
TYIK
HHCC
>Mature Secondary Structure
MKIAVIGNGIVGATFVNEILERFPAYQIVQFDGIKGTATTASAGIIAPWLSKRRNKKWYN
CEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHH
LARQGAEYMYQIAEKYRMPPAVYFKSGVIYTRDNNEKISALLTLAKDRIKDAPQMEGFRR
HHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHH
IDNAEIKQLFNFIQTENNGVLVEGGARIDGQKFVEFLNQRNQTKFELRNERAVLSKNGTD
CCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCEEEECCCCCC
TLVNGEKFDLIVLAVGAWLKDTLSDIGIEALTRPQKGQLIEVELPGQAQVNASAPVLMPE
CEECCCCCEEEEEEHHHHHHHHHHHCCHHHHCCCCCCCEEEEECCCCCEECCCCCEEECC
GERDFIPTNQGTLLIGATHENDQGFDLTVSDQIIDDLLASGQRVIPNLDKSMVKNTRVGT
CCCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC
RAYTEDFAPFFGYLPNHPQIMVASGLGSSGLTTGPIIGKLLADLVENPELDMTDLTKPLT
HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
TYIK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]