| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is gpsB
Identifier: 116492699
GI number: 116492699
Start: 936252
End: 936593
Strand: Direct
Name: gpsB
Synonym: PEPE_0934
Alternate gene names: 116492699
Gene position: 936252-936593 (Clockwise)
Preceding gene: 116492698
Following gene: 116492700
Centisome position: 51.09
GC content: 35.96
Gene sequence:
>342_bases ATGGACAACATTAATTTTACTCCAAAAGATATTTTGCAAAAGGAATTCAAACCAAAGATGCGTGGATATGATCCTGCTGA CGTGGATACATTCCTAGATTCAGTGATTAAAGATTACGAAAATTTCGGTAAAGAAATTGAACGTATGAAGAATGAAAATG ATCGTTTAACTGACAAAGTTGACGAACTTAATAAGCAAGTTTCTGCTGGTGGAACTGTTGAAGAATCAGCACCAGTTAGT GGAGCTACAAACGTAGATGTTTTGAAACGTTTGTCAAACCTTGAACGTCGCGTGTTTGGTGCTCAACTTGAAGATACTGA TAATAGTTCACATCGTATCTAA
Upstream 100 bases:
>100_bases GTTATATGAAGAAAAGGACGAATAATTCTTTGAATTTTTTAAAATCTTTGATACAATGATACATGGTAATTTGAACAAAA GTAATCGACGAGGTGCAACG
Downstream 100 bases:
>100_bases TTCAATTTAATAACACTTTGTAAATCTCGGGTAATTGCGGTTAGCATCTGCTAACTGAGGAAAGTCCATGCTCGCACAAG CTGCGATGCTTGTAGTGTTC
Product: cell division protein GpsB
Products: NA
Alternate protein names: Guiding PBP1-shuttling protein
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MDNINFTPKDILQKEFKPKMRGYDPADVDTFLDSVIKDYENFGKEIERMKNENDRLTDKVDELNKQVSAGGTVEESAPVS GATNVDVLKRLSNLERRVFGAQLEDTDNSSHRI
Sequences:
>Translated_113_residues MDNINFTPKDILQKEFKPKMRGYDPADVDTFLDSVIKDYENFGKEIERMKNENDRLTDKVDELNKQVSAGGTVEESAPVS GATNVDVLKRLSNLERRVFGAQLEDTDNSSHRI >Mature_113_residues MDNINFTPKDILQKEFKPKMRGYDPADVDTFLDSVIKDYENFGKEIERMKNENDRLTDKVDELNKQVSAGGTVEESAPVS GATNVDVLKRLSNLERRVFGAQLEDTDNSSHRI
Specific function: Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on divIC and PBP2B for its recruitment to the divisome. Together with ezrA, is a key component of the system that regulates PBP1 localiz
COG id: COG3599
COG function: function code D; Cell division initiation protein
Gene ontology:
Cell location: Cytoplasm. Note=Shuttles between the lateral wall and the division site in a cell cycle- dependent manner (By similarity)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gpsB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GPSB_PEDPA (Q03FN0)
Other databases:
- EMBL: CP000422 - RefSeq: YP_804434.1 - STRING: Q03FN0 - GeneID: 4417746 - GenomeReviews: CP000422_GR - KEGG: ppe:PEPE_0934 - NMPDR: fig|278197.10.peg.831 - eggNOG: COG3599 - HOGENOM: HBG313508 - OMA: SATNMDI - ProtClustDB: PRK14127 - BioCyc: PPEN278197:PEPE_0934-MONOMER - GO: GO:0005737 - HAMAP: MF_02011 - InterPro: IPR011229 - InterPro: IPR007793 - InterPro: IPR019933 - PIRSF: PIRSF029938 - TIGRFAMs: TIGR03544
Pfam domain/function: PF05103 DivIVA
EC number: NA
Molecular weight: Translated: 12850; Mature: 12850
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNINFTPKDILQKEFKPKMRGYDPADVDTFLDSVIKDYENFGKEIERMKNENDRLTDKV CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH DELNKQVSAGGTVEESAPVSGATNVDVLKRLSNLERRVFGAQLEDTDNSSHRI HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MDNINFTPKDILQKEFKPKMRGYDPADVDTFLDSVIKDYENFGKEIERMKNENDRLTDKV CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH DELNKQVSAGGTVEESAPVSGATNVDVLKRLSNLERRVFGAQLEDTDNSSHRI HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA