Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is gpsB

Identifier: 116492699

GI number: 116492699

Start: 936252

End: 936593

Strand: Direct

Name: gpsB

Synonym: PEPE_0934

Alternate gene names: 116492699

Gene position: 936252-936593 (Clockwise)

Preceding gene: 116492698

Following gene: 116492700

Centisome position: 51.09

GC content: 35.96

Gene sequence:

>342_bases
ATGGACAACATTAATTTTACTCCAAAAGATATTTTGCAAAAGGAATTCAAACCAAAGATGCGTGGATATGATCCTGCTGA
CGTGGATACATTCCTAGATTCAGTGATTAAAGATTACGAAAATTTCGGTAAAGAAATTGAACGTATGAAGAATGAAAATG
ATCGTTTAACTGACAAAGTTGACGAACTTAATAAGCAAGTTTCTGCTGGTGGAACTGTTGAAGAATCAGCACCAGTTAGT
GGAGCTACAAACGTAGATGTTTTGAAACGTTTGTCAAACCTTGAACGTCGCGTGTTTGGTGCTCAACTTGAAGATACTGA
TAATAGTTCACATCGTATCTAA

Upstream 100 bases:

>100_bases
GTTATATGAAGAAAAGGACGAATAATTCTTTGAATTTTTTAAAATCTTTGATACAATGATACATGGTAATTTGAACAAAA
GTAATCGACGAGGTGCAACG

Downstream 100 bases:

>100_bases
TTCAATTTAATAACACTTTGTAAATCTCGGGTAATTGCGGTTAGCATCTGCTAACTGAGGAAAGTCCATGCTCGCACAAG
CTGCGATGCTTGTAGTGTTC

Product: cell division protein GpsB

Products: NA

Alternate protein names: Guiding PBP1-shuttling protein

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MDNINFTPKDILQKEFKPKMRGYDPADVDTFLDSVIKDYENFGKEIERMKNENDRLTDKVDELNKQVSAGGTVEESAPVS
GATNVDVLKRLSNLERRVFGAQLEDTDNSSHRI

Sequences:

>Translated_113_residues
MDNINFTPKDILQKEFKPKMRGYDPADVDTFLDSVIKDYENFGKEIERMKNENDRLTDKVDELNKQVSAGGTVEESAPVS
GATNVDVLKRLSNLERRVFGAQLEDTDNSSHRI
>Mature_113_residues
MDNINFTPKDILQKEFKPKMRGYDPADVDTFLDSVIKDYENFGKEIERMKNENDRLTDKVDELNKQVSAGGTVEESAPVS
GATNVDVLKRLSNLERRVFGAQLEDTDNSSHRI

Specific function: Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on divIC and PBP2B for its recruitment to the divisome. Together with ezrA, is a key component of the system that regulates PBP1 localiz

COG id: COG3599

COG function: function code D; Cell division initiation protein

Gene ontology:

Cell location: Cytoplasm. Note=Shuttles between the lateral wall and the division site in a cell cycle- dependent manner (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gpsB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GPSB_PEDPA (Q03FN0)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804434.1
- STRING:   Q03FN0
- GeneID:   4417746
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_0934
- NMPDR:   fig|278197.10.peg.831
- eggNOG:   COG3599
- HOGENOM:   HBG313508
- OMA:   SATNMDI
- ProtClustDB:   PRK14127
- BioCyc:   PPEN278197:PEPE_0934-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_02011
- InterPro:   IPR011229
- InterPro:   IPR007793
- InterPro:   IPR019933
- PIRSF:   PIRSF029938
- TIGRFAMs:   TIGR03544

Pfam domain/function: PF05103 DivIVA

EC number: NA

Molecular weight: Translated: 12850; Mature: 12850

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNINFTPKDILQKEFKPKMRGYDPADVDTFLDSVIKDYENFGKEIERMKNENDRLTDKV
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
DELNKQVSAGGTVEESAPVSGATNVDVLKRLSNLERRVFGAQLEDTDNSSHRI
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDNINFTPKDILQKEFKPKMRGYDPADVDTFLDSVIKDYENFGKEIERMKNENDRLTDKV
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
DELNKQVSAGGTVEESAPVSGATNVDVLKRLSNLERRVFGAQLEDTDNSSHRI
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA