| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492679
Identifier: 116492679
GI number: 116492679
Start: 913572
End: 913760
Strand: Direct
Name: 116492679
Synonym: PEPE_0914
Alternate gene names: NA
Gene position: 913572-913760 (Clockwise)
Preceding gene: 116492676
Following gene: 116492681
Centisome position: 49.86
GC content: 40.74
Gene sequence:
>189_bases ATGCCATTAATTCATATTGATTTAATCGAAGGTCGGAATGAAGACCAACTTCGTGGACTAGTTAAAGACGTTACCGCAGC CGTCGTTAAAAACACGGGGGCTCCAGCAGAACACGTGCATGTTGTGCTAAATGAAATGTCAAAAAATCATTATTCGGTTG CCGGAACTTTAAAGAGCGACGAAAAATAA
Upstream 100 bases:
>100_bases CTTAATCATAGTTTATCACACAGAAAAGTACTTTGAATTATTTCTGTTTCATGAGAATATATATATGGGTTTAAATGGAT AATTTAAGGAGGAAATAAAG
Downstream 100 bases:
>100_bases TAAAAAAACTTCAAAATCAACTGAAAGATCAGTGATTTTGAAGTTTTTTACTCGGCTAAACCGAGATATTCATTGAGATA CTTTGCAACACCATCTTCGG
Product: 4-oxalocrotonate tautomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MPLIHIDLIEGRNEDQLRGLVKDVTAAVVKNTGAPAEHVHVVLNEMSKNHYSVAGTLKSDEK
Sequences:
>Translated_62_residues MPLIHIDLIEGRNEDQLRGLVKDVTAAVVKNTGAPAEHVHVVLNEMSKNHYSVAGTLKSDEK >Mature_61_residues PLIHIDLIEGRNEDQLRGLVKDVTAAVVKNTGAPAEHVHVVLNEMSKNHYSVAGTLKSDEK
Specific function: Unknown
COG id: COG1942
COG function: function code R; Uncharacterized protein, 4-oxalocrotonate tautomerase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-oxalocrotonate tautomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004370 - InterPro: IPR018191 - InterPro: IPR014347 [H]
Pfam domain/function: PF01361 Tautomerase [H]
EC number: NA
Molecular weight: Translated: 6790; Mature: 6659
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIHIDLIEGRNEDQLRGLVKDVTAAVVKNTGAPAEHVHVVLNEMSKNHYSVAGTLKSD CCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCC EK CC >Mature Secondary Structure PLIHIDLIEGRNEDQLRGLVKDVTAAVVKNTGAPAEHVHVVLNEMSKNHYSVAGTLKSD CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCC EK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12566566 [H]