Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492676

Identifier: 116492676

GI number: 116492676

Start: 910188

End: 910796

Strand: Direct

Name: 116492676

Synonym: PEPE_0911

Alternate gene names: NA

Gene position: 910188-910796 (Clockwise)

Preceding gene: 116492674

Following gene: 116492679

Centisome position: 49.67

GC content: 36.29

Gene sequence:

>609_bases
ATGCCTGAAAAAAATCAGCCGGCAGTTGATACGCAGTCAAGTTCTGCACCAGTAACTAGTAGTTCTAAACCAGTAACTAA
TAATTCTTCAACATCAACTAAACCGAATAATAGTGGAGCCACCAATTCTAATACAAGCACCTCGGCGAGTCACCAAGCTA
GTTCATCAGTGTCAACTAATAGCAACCATGATAAAGCGAGTTCGCAAACTAATAGCGAGTCTAGTGCCAAATCTGATAGT
ACATCTAAGGCTAGTTCACGAGTAAGTAGTAAGCAAAGTACTTATTATTACTACGTTAAACCTAATAGAGCAACTAATTC
TTATGATAATTATAATAGCGATGATAGTGATGACACGGACGAAGAAGATTCTTCATCGAGCAGCAGTAAGAGCAGTTCGG
AAGAAAAAGTTCATAAAGCTAAAAAAAGTCGGATTATTACTACAATTAAATCTGATTCAAATAGTGGTTCAGATATTGAA
TATCGAAATAGCCATGGTGGAATGATGACTTTCTTAGTAGTTTTGATTCTACTAGTTGGCGGCTATTTTATTTGGAAAAA
ACGACGTCAAAAACGTCCAACTAGCATTGGTAGACATCAAAAAAAGTAA

Upstream 100 bases:

>100_bases
TATAGTACCGGTTGAGGTTTCTCGGATTATAAATATGCTAAAATAGTAATATGAATTTTTCAGAAATTTAATTTTTAAGT
TACAGCGGGGGAGTAAGGTC

Downstream 100 bases:

>100_bases
AATAAAACCTCAAAATTTATAAATTTTGAGGTTTTTTATTTATCCAAAAAAGACAATTAATACCCGACCGACTAGGCCTA
AAAGTACCAAACCGACCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MPEKNQPAVDTQSSSAPVTSSSKPVTNNSSTSTKPNNSGATNSNTSTSASHQASSSVSTNSNHDKASSQTNSESSAKSDS
TSKASSRVSSKQSTYYYYVKPNRATNSYDNYNSDDSDDTDEEDSSSSSSKSSSEEKVHKAKKSRIITTIKSDSNSGSDIE
YRNSHGGMMTFLVVLILLVGGYFIWKKRRQKRPTSIGRHQKK

Sequences:

>Translated_202_residues
MPEKNQPAVDTQSSSAPVTSSSKPVTNNSSTSTKPNNSGATNSNTSTSASHQASSSVSTNSNHDKASSQTNSESSAKSDS
TSKASSRVSSKQSTYYYYVKPNRATNSYDNYNSDDSDDTDEEDSSSSSSKSSSEEKVHKAKKSRIITTIKSDSNSGSDIE
YRNSHGGMMTFLVVLILLVGGYFIWKKRRQKRPTSIGRHQKK
>Mature_201_residues
PEKNQPAVDTQSSSAPVTSSSKPVTNNSSTSTKPNNSGATNSNTSTSASHQASSSVSTNSNHDKASSQTNSESSAKSDST
SKASSRVSSKQSTYYYYVKPNRATNSYDNYNSDDSDDTDEEDSSSSSSKSSSEEKVHKAKKSRIITTIKSDSNSGSDIEY
RNSHGGMMTFLVVLILLVGGYFIWKKRRQKRPTSIGRHQKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21862; Mature: 21731

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKNQPAVDTQSSSAPVTSSSKPVTNNSSTSTKPNNSGATNSNTSTSASHQASSSVSTN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
SNHDKASSQTNSESSAKSDSTSKASSRVSSKQSTYYYYVKPNRATNSYDNYNSDDSDDTD
CCCCHHCCCCCCCHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
EEDSSSSSSKSSSEEKVHKAKKSRIITTIKSDSNSGSDIEYRNSHGGMMTFLVVLILLVG
CCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHH
GYFIWKKRRQKRPTSIGRHQKK
HHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PEKNQPAVDTQSSSAPVTSSSKPVTNNSSTSTKPNNSGATNSNTSTSASHQASSSVSTN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
SNHDKASSQTNSESSAKSDSTSKASSRVSSKQSTYYYYVKPNRATNSYDNYNSDDSDDTD
CCCCHHCCCCCCCHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
EEDSSSSSSKSSSEEKVHKAKKSRIITTIKSDSNSGSDIEYRNSHGGMMTFLVVLILLVG
CCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHH
GYFIWKKRRQKRPTSIGRHQKK
HHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA