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The map label for this gene is ylxR [H]

Identifier: 116492654

GI number: 116492654

Start: 890520

End: 890813

Strand: Direct

Name: ylxR [H]

Synonym: PEPE_0888

Alternate gene names: 116492654

Gene position: 890520-890813 (Clockwise)

Preceding gene: 116492653

Following gene: 116492655

Centisome position: 48.6

GC content: 36.05

Gene sequence:

>294_bases
ATGAAAACCAGAAAAATACCAATGCGTAAAGACATTGTGACAAATCAAATGTTTCCTAAAAAGGAACTCGTGCGAGTTGT
TAAAAATAAGGAAAACGAAGTAGCTATTGATCCGACGGGTAAAGCTGCAGGACGAGGCGCTTATATTGGATTAGATGTCG
AAATTGCTAAAAAGGCAAAAAAGAAGCGAACTTTTGATCAAGCGTTTAAAATTAAAGTTGACGACCAGTTCTACGATGAC
TTAATTGCTTATGTTGATCATCAGCAAGCACGAAAAGAGTTATTTGGTAAGTAA

Upstream 100 bases:

>100_bases
CATCAAATCGGAAACAGATGCATCAGAATATGCTGAAGAAGAAGATTCTGAAGAAAGTACAGAAGAAACCGCTGAATAAA
CCATTGGAGGTGTGTTCTTG

Downstream 100 bases:

>100_bases
ATGATTAAAGAAAATATTAGTAAATATCTCGGATTGATGCGCCGTTCAGGTAACTTGGTTACTGGTCAAGAACTAGTACT
CAGTTCAATTCGTAGTCAGA

Product: nucleic-acid-binding protein implicated in transcription termination

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKTRKIPMRKDIVTNQMFPKKELVRVVKNKENEVAIDPTGKAAGRGAYIGLDVEIAKKAKKKRTFDQAFKIKVDDQFYDD
LIAYVDHQQARKELFGK

Sequences:

>Translated_97_residues
MKTRKIPMRKDIVTNQMFPKKELVRVVKNKENEVAIDPTGKAAGRGAYIGLDVEIAKKAKKKRTFDQAFKIKVDDQFYDD
LIAYVDHQQARKELFGK
>Mature_97_residues
MKTRKIPMRKDIVTNQMFPKKELVRVVKNKENEVAIDPTGKAAGRGAYIGLDVEIAKKAKKKRTFDQAFKIKVDDQFYDD
LIAYVDHQQARKELFGK

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007393 [H]

Pfam domain/function: PF04296 DUF448 [H]

EC number: NA

Molecular weight: Translated: 11213; Mature: 11213

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRKIPMRKDIVTNQMFPKKELVRVVKNKENEVAIDPTGKAAGRGAYIGLDVEIAKKAK
CCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCEEECCHHHHHHHH
KKRTFDQAFKIKVDDQFYDDLIAYVDHQQARKELFGK
HHHCHHHHEEEEECCHHHHHHHHHHCHHHHHHHHCCC
>Mature Secondary Structure
MKTRKIPMRKDIVTNQMFPKKELVRVVKNKENEVAIDPTGKAAGRGAYIGLDVEIAKKAK
CCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCEEECCHHHHHHHH
KKRTFDQAFKIKVDDQFYDDLIAYVDHQQARKELFGK
HHHCHHHHEEEEECCHHHHHHHHHHCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491709; 9384377 [H]