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The map label for this gene is 116492612

Identifier: 116492612

GI number: 116492612

Start: 853227

End: 853568

Strand: Direct

Name: 116492612

Synonym: PEPE_0845

Alternate gene names: NA

Gene position: 853227-853568 (Clockwise)

Preceding gene: 116492611

Following gene: 116492613

Centisome position: 46.56

GC content: 30.99

Gene sequence:

>342_bases
ATGGAAATCGAAAAAAATAATCGCATTAATAGCTTGTTGGAATTTTATGAACAGTTATTGACTCCAAAACAAAAGGAGTA
TATAACACTGTATTATGCGGACGATTATTCATTAGGGGAAATCTCCGAAGAATTTCAGGTCAGTCGGCAAGCCGTGTATG
ATAATATTAAAAGGACGGTAAATATTTTAGAAAAGTACGAACAGCAACTTCATTTGTTAAGTAATTTTGAAGTGCGCAAT
GCAAAATTTGATCAAATTCGTGCTTATATTAATCAAAAATATCCGGAAGATACTGAATTAAAACACTTTTTAGATGATCT
CGAAAAAAGTGAAGAAGAATAA

Upstream 100 bases:

>100_bases
AATACGTTGGTTTAGGAGAGACGGTGGACGATCTTAGTCCATTTAATCCAGAACAATACGTAAGTGGACTCTTTAAGGGT
CTAATGGAAGATTAACGCCA

Downstream 100 bases:

>100_bases
AGACGGAGGGGCTTTAAATGGCTTTTGAGGGTCTAACTGAACGATTACAAAAAACTTTCACTAATTTAAGAAAAAAGGGT
AAAGTTACTGAGGCTGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MEIEKNNRINSLLEFYEQLLTPKQKEYITLYYADDYSLGEISEEFQVSRQAVYDNIKRTVNILEKYEQQLHLLSNFEVRN
AKFDQIRAYINQKYPEDTELKHFLDDLEKSEEE

Sequences:

>Translated_113_residues
MEIEKNNRINSLLEFYEQLLTPKQKEYITLYYADDYSLGEISEEFQVSRQAVYDNIKRTVNILEKYEQQLHLLSNFEVRN
AKFDQIRAYINQKYPEDTELKHFLDDLEKSEEE
>Mature_113_residues
MEIEKNNRINSLLEFYEQLLTPKQKEYITLYYADDYSLGEISEEFQVSRQAVYDNIKRTVNILEKYEQQLHLLSNFEVRN
AKFDQIRAYINQKYPEDTELKHFLDDLEKSEEE

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y845_PEDPA (Q03FW7)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804347.1
- ProteinModelPortal:   Q03FW7
- SMR:   Q03FW7
- STRING:   Q03FW7
- GeneID:   4417962
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_0845
- NMPDR:   fig|278197.10.peg.749
- eggNOG:   COG2739
- HOGENOM:   HBG427419
- OMA:   KSYMSLY
- BioCyc:   PPEN278197:PEPE_0845-MONOMER
- HAMAP:   MF_00245
- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04297 UPF0122; SSF88659 Sigma_r3_r4

EC number: NA

Molecular weight: Translated: 13736; Mature: 13736

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIEKNNRINSLLEFYEQLLTPKQKEYITLYYADDYSLGEISEEFQVSRQAVYDNIKRTV
CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
NILEKYEQQLHLLSNFEVRNAKFDQIRAYINQKYPEDTELKHFLDDLEKSEEE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEIEKNNRINSLLEFYEQLLTPKQKEYITLYYADDYSLGEISEEFQVSRQAVYDNIKRTV
CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
NILEKYEQQLHLLSNFEVRNAKFDQIRAYINQKYPEDTELKHFLDDLEKSEEE
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA