Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492605

Identifier: 116492605

GI number: 116492605

Start: 842541

End: 844229

Strand: Direct

Name: 116492605

Synonym: PEPE_0838

Alternate gene names: NA

Gene position: 842541-844229 (Clockwise)

Preceding gene: 116492604

Following gene: 116492606

Centisome position: 45.98

GC content: 38.48

Gene sequence:

>1689_bases
TTGGAAGCAATAGGAACATTGATTACTAATGAAGTTTTTGATCAGATGGTGCAAGCCAGTTCTGATCGTTTAAAAATGAA
TGCGGATTTTATTAATTCTTTGAACGTTTTTCCGGTACCAGATGGAGATACTGGAACAAATATGAGCCTTTCACTTGAAA
GTGGTGCAAAGTATGAAAATGACGATGCTAGTTTGGAAGTAGGGCATTTAGCGGCTTCTTTAGCTAAAGGGCTCTTAATG
GGAGCACGTGGTAACTCTGGGGTAATTTTATCTCAAATTTTCCGCGGATTTGCTAAGAGCGTTGAAGGTAAAGCAACGCT
TAATGCTGAAGATTTAGCCGAAGCTGTCGCAGAAGGCGCAAAAACGGCTTATAAGGCGGTAATGAAGCCTACAGAAGGAA
CTATTCTAACAGTGGTTCGTGAAGCTGCTAAGGCAGGTAATGAGGCAATTAAAACGACTGATAGTTTAGCCGAAGTTATG
GAAGCTATTGATAGTGCTGCACAAACAGCCCTTAAAAAGACGACTGATCTTCTTCCAGTTTTAAAAGAAGTAGGCGTAGT
AGATTCCGGTGGTCAAGGTTTAGTATTTGTTTTTGATGCGTTTAATGACGTTTTGAATGGTAATGATATTACTGAATACA
AGCATGAACCGGATGCTACTGAAGTAAATGAAATGGTAGATGCTAAACACCATCAAAGTGTACAGGGGAAAATTAATCCA
GAAGATATTGAATTTGGATATTGTACTCAAATGATGGTACGAATCGGAAAAGGACTGCAAGTTACTAAGGAGTTCGATTA
CGATACTTTCTACAATTATCTAGCCAAGATGGGTGATTCATTACTAGTTATCAATGATGATGAAGTGGTTAAGGTACATG
TTCATACCGAACATCCCGGCGAAGTTTTAGCTTGGGGCCAACAATTTGGTGATATTACCAAAATTAAAGTTGATAATATG
CGTTGGCAACAAGAAGAAATCATGGAACAAGATGAAACACCAACAGCATCATCAGCCTCAAAAGAAGCGGCTCCTGAAAC
AGCTGTAATTGCAATTTCATCAGGTGCAGGTATCTCTAAATTATTTACTAGTTTAGGGGTAACGCATATCATTAGTGGCG
GACAAACGATGAATCCAAGTACCGCTGATATCGTAGCCATGATTAATGATTCAGGCGCTAAAAAAGCGATTGTGTTGCCT
AATAATAAAAATATTTTTCTAGCTGCTGAGCAGGCCGTTGAGGTAGCTGATATTCCAACTAAGATTATCCATAGCCGGAC
AATTTCTCAAGGAATGGCAGCAATGCTTGAGTTTAATCCAGACGTTGATTTGGAAGAAAATGCAGAAGCAATGGAATCTA
ACTTGAACACTGTCAAAAGTGGACAAGTAACAATTGCAGTTCGTGATACTAAGTTGGACGGACGCGAAATTCATCAAGAT
GATTATATGGGATTGATTGATGGTAAAATCGTTAATACCAATCCTAAATTGATGGATGCAACGGTCGAAATGGTTAAATT
AATGTTAGAAGAAGATAGCGAAATCGTCACGATTATTTATGGCCAAGATGCTACTTCAGAGATGGCAGAACAATTGCAAA
ACGCAATTTTAGATATTGATGATGACCTTGAAGTTGAAATTCATGAAGGTGACCAGCCAGTTTACCCATTTTTAGTTTCA
GTTGAATAA

Upstream 100 bases:

>100_bases
AGAATCAATGCTTGGCATTTCTGCTAATTCGGTCAATGTTTTTGTTCAAGGTGTGAAGTTGCTCAACGATTAGGTTCGTT
GAACTAGGAGGATAATGAAT

Downstream 100 bases:

>100_bases
TACTTATAGGTCGGTTATTAGCCGACCTATTTTTGATTTACGGAGGGAAAATGAAAAGCTTAACAGACTCAGTTCAAGTG
CTTCCTGGAGTGGGACCTAA

Product: dihydroxyacetone kinase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MEAIGTLITNEVFDQMVQASSDRLKMNADFINSLNVFPVPDGDTGTNMSLSLESGAKYENDDASLEVGHLAASLAKGLLM
GARGNSGVILSQIFRGFAKSVEGKATLNAEDLAEAVAEGAKTAYKAVMKPTEGTILTVVREAAKAGNEAIKTTDSLAEVM
EAIDSAAQTALKKTTDLLPVLKEVGVVDSGGQGLVFVFDAFNDVLNGNDITEYKHEPDATEVNEMVDAKHHQSVQGKINP
EDIEFGYCTQMMVRIGKGLQVTKEFDYDTFYNYLAKMGDSLLVINDDEVVKVHVHTEHPGEVLAWGQQFGDITKIKVDNM
RWQQEEIMEQDETPTASSASKEAAPETAVIAISSGAGISKLFTSLGVTHIISGGQTMNPSTADIVAMINDSGAKKAIVLP
NNKNIFLAAEQAVEVADIPTKIIHSRTISQGMAAMLEFNPDVDLEENAEAMESNLNTVKSGQVTIAVRDTKLDGREIHQD
DYMGLIDGKIVNTNPKLMDATVEMVKLMLEEDSEIVTIIYGQDATSEMAEQLQNAILDIDDDLEVEIHEGDQPVYPFLVS
VE

Sequences:

>Translated_562_residues
MEAIGTLITNEVFDQMVQASSDRLKMNADFINSLNVFPVPDGDTGTNMSLSLESGAKYENDDASLEVGHLAASLAKGLLM
GARGNSGVILSQIFRGFAKSVEGKATLNAEDLAEAVAEGAKTAYKAVMKPTEGTILTVVREAAKAGNEAIKTTDSLAEVM
EAIDSAAQTALKKTTDLLPVLKEVGVVDSGGQGLVFVFDAFNDVLNGNDITEYKHEPDATEVNEMVDAKHHQSVQGKINP
EDIEFGYCTQMMVRIGKGLQVTKEFDYDTFYNYLAKMGDSLLVINDDEVVKVHVHTEHPGEVLAWGQQFGDITKIKVDNM
RWQQEEIMEQDETPTASSASKEAAPETAVIAISSGAGISKLFTSLGVTHIISGGQTMNPSTADIVAMINDSGAKKAIVLP
NNKNIFLAAEQAVEVADIPTKIIHSRTISQGMAAMLEFNPDVDLEENAEAMESNLNTVKSGQVTIAVRDTKLDGREIHQD
DYMGLIDGKIVNTNPKLMDATVEMVKLMLEEDSEIVTIIYGQDATSEMAEQLQNAILDIDDDLEVEIHEGDQPVYPFLVS
VE
>Mature_562_residues
MEAIGTLITNEVFDQMVQASSDRLKMNADFINSLNVFPVPDGDTGTNMSLSLESGAKYENDDASLEVGHLAASLAKGLLM
GARGNSGVILSQIFRGFAKSVEGKATLNAEDLAEAVAEGAKTAYKAVMKPTEGTILTVVREAAKAGNEAIKTTDSLAEVM
EAIDSAAQTALKKTTDLLPVLKEVGVVDSGGQGLVFVFDAFNDVLNGNDITEYKHEPDATEVNEMVDAKHHQSVQGKINP
EDIEFGYCTQMMVRIGKGLQVTKEFDYDTFYNYLAKMGDSLLVINDDEVVKVHVHTEHPGEVLAWGQQFGDITKIKVDNM
RWQQEEIMEQDETPTASSASKEAAPETAVIAISSGAGISKLFTSLGVTHIISGGQTMNPSTADIVAMINDSGAKKAIVLP
NNKNIFLAAEQAVEVADIPTKIIHSRTISQGMAAMLEFNPDVDLEENAEAMESNLNTVKSGQVTIAVRDTKLDGREIHQD
DYMGLIDGKIVNTNPKLMDATVEMVKLMLEEDSEIVTIIYGQDATSEMAEQLQNAILDIDDDLEVEIHEGDQPVYPFLVS
VE

Specific function: Unknown

COG id: COG1461

COG function: function code R; Predicted kinase related to dihydroxyacetone kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DhaL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004007
- InterPro:   IPR019986 [H]

Pfam domain/function: PF02734 Dak2 [H]

EC number: NA

Molecular weight: Translated: 60743; Mature: 60743

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAIGTLITNEVFDQMVQASSDRLKMNADFINSLNVFPVPDGDTGTNMSLSLESGAKYEN
CCHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCC
DDASLEVGHLAASLAKGLLMGARGNSGVILSQIFRGFAKSVEGKATLNAEDLAEAVAEGA
CCCCEEHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHH
KTAYKAVMKPTEGTILTVVREAAKAGNEAIKTTDSLAEVMEAIDSAAQTALKKTTDLLPV
HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKEVGVVDSGGQGLVFVFDAFNDVLNGNDITEYKHEPDATEVNEMVDAKHHQSVQGKINP
HHHCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
EDIEFGYCTQMMVRIGKGLQVTKEFDYDTFYNYLAKMGDSLLVINDDEVVKVHVHTEHPG
CCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCC
EVLAWGQQFGDITKIKVDNMRWQQEEIMEQDETPTASSASKEAAPETAVIAISSGAGISK
HHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHCCCCEEEEEEECCCCHHH
LFTSLGVTHIISGGQTMNPSTADIVAMINDSGAKKAIVLPNNKNIFLAAEQAVEVADIPT
HHHHHCHHHEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEECCCHHHHHCCH
KIIHSRTISQGMAAMLEFNPDVDLEENAEAMESNLNTVKSGQVTIAVRDTKLDGREIHQD
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEECCCEEEEEEEECCCCCCCCCCC
DYMGLIDGKIVNTNPKLMDATVEMVKLMLEEDSEIVTIIYGQDATSEMAEQLQNAILDID
CCEEEECCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCC
DDLEVEIHEGDQPVYPFLVSVE
CCCEEEEECCCCCCCCEEEEEC
>Mature Secondary Structure
MEAIGTLITNEVFDQMVQASSDRLKMNADFINSLNVFPVPDGDTGTNMSLSLESGAKYEN
CCHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCC
DDASLEVGHLAASLAKGLLMGARGNSGVILSQIFRGFAKSVEGKATLNAEDLAEAVAEGA
CCCCEEHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHH
KTAYKAVMKPTEGTILTVVREAAKAGNEAIKTTDSLAEVMEAIDSAAQTALKKTTDLLPV
HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKEVGVVDSGGQGLVFVFDAFNDVLNGNDITEYKHEPDATEVNEMVDAKHHQSVQGKINP
HHHCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
EDIEFGYCTQMMVRIGKGLQVTKEFDYDTFYNYLAKMGDSLLVINDDEVVKVHVHTEHPG
CCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCC
EVLAWGQQFGDITKIKVDNMRWQQEEIMEQDETPTASSASKEAAPETAVIAISSGAGISK
HHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHCCCCEEEEEEECCCCHHH
LFTSLGVTHIISGGQTMNPSTADIVAMINDSGAKKAIVLPNNKNIFLAAEQAVEVADIPT
HHHHHCHHHEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEECCCHHHHHCCH
KIIHSRTISQGMAAMLEFNPDVDLEENAEAMESNLNTVKSGQVTIAVRDTKLDGREIHQD
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEECCCEEEEEEEECCCCCCCCCCC
DYMGLIDGKIVNTNPKLMDATVEMVKLMLEEDSEIVTIIYGQDATSEMAEQLQNAILDID
CCEEEECCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCC
DDLEVEIHEGDQPVYPFLVSVE
CCCEEEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]