| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492605
Identifier: 116492605
GI number: 116492605
Start: 842541
End: 844229
Strand: Direct
Name: 116492605
Synonym: PEPE_0838
Alternate gene names: NA
Gene position: 842541-844229 (Clockwise)
Preceding gene: 116492604
Following gene: 116492606
Centisome position: 45.98
GC content: 38.48
Gene sequence:
>1689_bases TTGGAAGCAATAGGAACATTGATTACTAATGAAGTTTTTGATCAGATGGTGCAAGCCAGTTCTGATCGTTTAAAAATGAA TGCGGATTTTATTAATTCTTTGAACGTTTTTCCGGTACCAGATGGAGATACTGGAACAAATATGAGCCTTTCACTTGAAA GTGGTGCAAAGTATGAAAATGACGATGCTAGTTTGGAAGTAGGGCATTTAGCGGCTTCTTTAGCTAAAGGGCTCTTAATG GGAGCACGTGGTAACTCTGGGGTAATTTTATCTCAAATTTTCCGCGGATTTGCTAAGAGCGTTGAAGGTAAAGCAACGCT TAATGCTGAAGATTTAGCCGAAGCTGTCGCAGAAGGCGCAAAAACGGCTTATAAGGCGGTAATGAAGCCTACAGAAGGAA CTATTCTAACAGTGGTTCGTGAAGCTGCTAAGGCAGGTAATGAGGCAATTAAAACGACTGATAGTTTAGCCGAAGTTATG GAAGCTATTGATAGTGCTGCACAAACAGCCCTTAAAAAGACGACTGATCTTCTTCCAGTTTTAAAAGAAGTAGGCGTAGT AGATTCCGGTGGTCAAGGTTTAGTATTTGTTTTTGATGCGTTTAATGACGTTTTGAATGGTAATGATATTACTGAATACA AGCATGAACCGGATGCTACTGAAGTAAATGAAATGGTAGATGCTAAACACCATCAAAGTGTACAGGGGAAAATTAATCCA GAAGATATTGAATTTGGATATTGTACTCAAATGATGGTACGAATCGGAAAAGGACTGCAAGTTACTAAGGAGTTCGATTA CGATACTTTCTACAATTATCTAGCCAAGATGGGTGATTCATTACTAGTTATCAATGATGATGAAGTGGTTAAGGTACATG TTCATACCGAACATCCCGGCGAAGTTTTAGCTTGGGGCCAACAATTTGGTGATATTACCAAAATTAAAGTTGATAATATG CGTTGGCAACAAGAAGAAATCATGGAACAAGATGAAACACCAACAGCATCATCAGCCTCAAAAGAAGCGGCTCCTGAAAC AGCTGTAATTGCAATTTCATCAGGTGCAGGTATCTCTAAATTATTTACTAGTTTAGGGGTAACGCATATCATTAGTGGCG GACAAACGATGAATCCAAGTACCGCTGATATCGTAGCCATGATTAATGATTCAGGCGCTAAAAAAGCGATTGTGTTGCCT AATAATAAAAATATTTTTCTAGCTGCTGAGCAGGCCGTTGAGGTAGCTGATATTCCAACTAAGATTATCCATAGCCGGAC AATTTCTCAAGGAATGGCAGCAATGCTTGAGTTTAATCCAGACGTTGATTTGGAAGAAAATGCAGAAGCAATGGAATCTA ACTTGAACACTGTCAAAAGTGGACAAGTAACAATTGCAGTTCGTGATACTAAGTTGGACGGACGCGAAATTCATCAAGAT GATTATATGGGATTGATTGATGGTAAAATCGTTAATACCAATCCTAAATTGATGGATGCAACGGTCGAAATGGTTAAATT AATGTTAGAAGAAGATAGCGAAATCGTCACGATTATTTATGGCCAAGATGCTACTTCAGAGATGGCAGAACAATTGCAAA ACGCAATTTTAGATATTGATGATGACCTTGAAGTTGAAATTCATGAAGGTGACCAGCCAGTTTACCCATTTTTAGTTTCA GTTGAATAA
Upstream 100 bases:
>100_bases AGAATCAATGCTTGGCATTTCTGCTAATTCGGTCAATGTTTTTGTTCAAGGTGTGAAGTTGCTCAACGATTAGGTTCGTT GAACTAGGAGGATAATGAAT
Downstream 100 bases:
>100_bases TACTTATAGGTCGGTTATTAGCCGACCTATTTTTGATTTACGGAGGGAAAATGAAAAGCTTAACAGACTCAGTTCAAGTG CTTCCTGGAGTGGGACCTAA
Product: dihydroxyacetone kinase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MEAIGTLITNEVFDQMVQASSDRLKMNADFINSLNVFPVPDGDTGTNMSLSLESGAKYENDDASLEVGHLAASLAKGLLM GARGNSGVILSQIFRGFAKSVEGKATLNAEDLAEAVAEGAKTAYKAVMKPTEGTILTVVREAAKAGNEAIKTTDSLAEVM EAIDSAAQTALKKTTDLLPVLKEVGVVDSGGQGLVFVFDAFNDVLNGNDITEYKHEPDATEVNEMVDAKHHQSVQGKINP EDIEFGYCTQMMVRIGKGLQVTKEFDYDTFYNYLAKMGDSLLVINDDEVVKVHVHTEHPGEVLAWGQQFGDITKIKVDNM RWQQEEIMEQDETPTASSASKEAAPETAVIAISSGAGISKLFTSLGVTHIISGGQTMNPSTADIVAMINDSGAKKAIVLP NNKNIFLAAEQAVEVADIPTKIIHSRTISQGMAAMLEFNPDVDLEENAEAMESNLNTVKSGQVTIAVRDTKLDGREIHQD DYMGLIDGKIVNTNPKLMDATVEMVKLMLEEDSEIVTIIYGQDATSEMAEQLQNAILDIDDDLEVEIHEGDQPVYPFLVS VE
Sequences:
>Translated_562_residues MEAIGTLITNEVFDQMVQASSDRLKMNADFINSLNVFPVPDGDTGTNMSLSLESGAKYENDDASLEVGHLAASLAKGLLM GARGNSGVILSQIFRGFAKSVEGKATLNAEDLAEAVAEGAKTAYKAVMKPTEGTILTVVREAAKAGNEAIKTTDSLAEVM EAIDSAAQTALKKTTDLLPVLKEVGVVDSGGQGLVFVFDAFNDVLNGNDITEYKHEPDATEVNEMVDAKHHQSVQGKINP EDIEFGYCTQMMVRIGKGLQVTKEFDYDTFYNYLAKMGDSLLVINDDEVVKVHVHTEHPGEVLAWGQQFGDITKIKVDNM RWQQEEIMEQDETPTASSASKEAAPETAVIAISSGAGISKLFTSLGVTHIISGGQTMNPSTADIVAMINDSGAKKAIVLP NNKNIFLAAEQAVEVADIPTKIIHSRTISQGMAAMLEFNPDVDLEENAEAMESNLNTVKSGQVTIAVRDTKLDGREIHQD DYMGLIDGKIVNTNPKLMDATVEMVKLMLEEDSEIVTIIYGQDATSEMAEQLQNAILDIDDDLEVEIHEGDQPVYPFLVS VE >Mature_562_residues MEAIGTLITNEVFDQMVQASSDRLKMNADFINSLNVFPVPDGDTGTNMSLSLESGAKYENDDASLEVGHLAASLAKGLLM GARGNSGVILSQIFRGFAKSVEGKATLNAEDLAEAVAEGAKTAYKAVMKPTEGTILTVVREAAKAGNEAIKTTDSLAEVM EAIDSAAQTALKKTTDLLPVLKEVGVVDSGGQGLVFVFDAFNDVLNGNDITEYKHEPDATEVNEMVDAKHHQSVQGKINP EDIEFGYCTQMMVRIGKGLQVTKEFDYDTFYNYLAKMGDSLLVINDDEVVKVHVHTEHPGEVLAWGQQFGDITKIKVDNM RWQQEEIMEQDETPTASSASKEAAPETAVIAISSGAGISKLFTSLGVTHIISGGQTMNPSTADIVAMINDSGAKKAIVLP NNKNIFLAAEQAVEVADIPTKIIHSRTISQGMAAMLEFNPDVDLEENAEAMESNLNTVKSGQVTIAVRDTKLDGREIHQD DYMGLIDGKIVNTNPKLMDATVEMVKLMLEEDSEIVTIIYGQDATSEMAEQLQNAILDIDDDLEVEIHEGDQPVYPFLVS VE
Specific function: Unknown
COG id: COG1461
COG function: function code R; Predicted kinase related to dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR019986 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: NA
Molecular weight: Translated: 60743; Mature: 60743
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAIGTLITNEVFDQMVQASSDRLKMNADFINSLNVFPVPDGDTGTNMSLSLESGAKYEN CCHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCC DDASLEVGHLAASLAKGLLMGARGNSGVILSQIFRGFAKSVEGKATLNAEDLAEAVAEGA CCCCEEHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHH KTAYKAVMKPTEGTILTVVREAAKAGNEAIKTTDSLAEVMEAIDSAAQTALKKTTDLLPV HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKEVGVVDSGGQGLVFVFDAFNDVLNGNDITEYKHEPDATEVNEMVDAKHHQSVQGKINP HHHCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC EDIEFGYCTQMMVRIGKGLQVTKEFDYDTFYNYLAKMGDSLLVINDDEVVKVHVHTEHPG CCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCC EVLAWGQQFGDITKIKVDNMRWQQEEIMEQDETPTASSASKEAAPETAVIAISSGAGISK HHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHCCCCEEEEEEECCCCHHH LFTSLGVTHIISGGQTMNPSTADIVAMINDSGAKKAIVLPNNKNIFLAAEQAVEVADIPT HHHHHCHHHEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEECCCHHHHHCCH KIIHSRTISQGMAAMLEFNPDVDLEENAEAMESNLNTVKSGQVTIAVRDTKLDGREIHQD HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEECCCEEEEEEEECCCCCCCCCCC DYMGLIDGKIVNTNPKLMDATVEMVKLMLEEDSEIVTIIYGQDATSEMAEQLQNAILDID CCEEEECCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCC DDLEVEIHEGDQPVYPFLVSVE CCCEEEEECCCCCCCCEEEEEC >Mature Secondary Structure MEAIGTLITNEVFDQMVQASSDRLKMNADFINSLNVFPVPDGDTGTNMSLSLESGAKYEN CCHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCCEEECCCCCCCCCEEEEECCCCCCCC DDASLEVGHLAASLAKGLLMGARGNSGVILSQIFRGFAKSVEGKATLNAEDLAEAVAEGA CCCCEEHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHH KTAYKAVMKPTEGTILTVVREAAKAGNEAIKTTDSLAEVMEAIDSAAQTALKKTTDLLPV HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKEVGVVDSGGQGLVFVFDAFNDVLNGNDITEYKHEPDATEVNEMVDAKHHQSVQGKINP HHHCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC EDIEFGYCTQMMVRIGKGLQVTKEFDYDTFYNYLAKMGDSLLVINDDEVVKVHVHTEHPG CCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCC EVLAWGQQFGDITKIKVDNMRWQQEEIMEQDETPTASSASKEAAPETAVIAISSGAGISK HHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCHHCCCCEEEEEEECCCCHHH LFTSLGVTHIISGGQTMNPSTADIVAMINDSGAKKAIVLPNNKNIFLAAEQAVEVADIPT HHHHHCHHHEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEECCCHHHHHCCH KIIHSRTISQGMAAMLEFNPDVDLEENAEAMESNLNTVKSGQVTIAVRDTKLDGREIHQD HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEECCCEEEEEEEECCCCCCCCCCC DYMGLIDGKIVNTNPKLMDATVEMVKLMLEEDSEIVTIIYGQDATSEMAEQLQNAILDID CCEEEECCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCC DDLEVEIHEGDQPVYPFLVSVE CCCEEEEECCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]