| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is yloU [H]
Identifier: 116492604
GI number: 116492604
Start: 842151
End: 842513
Strand: Direct
Name: yloU [H]
Synonym: PEPE_0837
Alternate gene names: 116492604
Gene position: 842151-842513 (Clockwise)
Preceding gene: 116492602
Following gene: 116492605
Centisome position: 45.96
GC content: 35.54
Gene sequence:
>363_bases ATGGCTGTCAAGATAAAAACAAAAAATGGAACAATTGACGTTTCAAACGATGTAATTGCTACTGTTGTTGGCGGAGCCGC AACTGATAATTATGGGGTTGTCGGAATGGCTAGTAAAAACCAGATTCGTGACAACATAAATGAAATTCTAAAAAGAGAAA ATTACGCTCGTGGAGTAGTAATTAAACAAGAAGCAAATGGGATCGCCATCGATGTTTACATTATCGTTGGATATGGTACT AAAATTTCTGAAATATCAAAAAATGTACAATCAAAAGTTAAGTACAGCCTAGAATCAATGCTTGGCATTTCTGCTAATTC GGTCAATGTTTTTGTTCAAGGTGTGAAGTTGCTCAACGATTAG
Upstream 100 bases:
>100_bases ATAATCAGTATCCAATTCAGATGTTTGCTCTTGTATTTAATGCATGTATGGGATATGGTAAAATATCGTTGGTATATATG AATACTAAGGAGGCAGGGGT
Downstream 100 bases:
>100_bases GTTCGTTGAACTAGGAGGATAATGAATTTGGAAGCAATAGGAACATTGATTACTAATGAAGTTTTTGATCAGATGGTGCA AGCCAGTTCTGATCGTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MAVKIKTKNGTIDVSNDVIATVVGGAATDNYGVVGMASKNQIRDNINEILKRENYARGVVIKQEANGIAIDVYIIVGYGT KISEISKNVQSKVKYSLESMLGISANSVNVFVQGVKLLND
Sequences:
>Translated_120_residues MAVKIKTKNGTIDVSNDVIATVVGGAATDNYGVVGMASKNQIRDNINEILKRENYARGVVIKQEANGIAIDVYIIVGYGT KISEISKNVQSKVKYSLESMLGISANSVNVFVQGVKLLND >Mature_119_residues AVKIKTKNGTIDVSNDVIATVVGGAATDNYGVVGMASKNQIRDNINEILKRENYARGVVIKQEANGIAIDVYIIVGYGTK ISEISKNVQSKVKYSLESMLGISANSVNVFVQGVKLLND
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asp23 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005531 [H]
Pfam domain/function: PF03780 DUF322 [H]
EC number: NA
Molecular weight: Translated: 12863; Mature: 12732
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKIKTKNGTIDVSNDVIATVVGGAATDNYGVVGMASKNQIRDNINEILKRENYARGVV CEEEEECCCCEEEECCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEE IKQEANGIAIDVYIIVGYGTKISEISKNVQSKVKYSLESMLGISANSVNVFVQGVKLLND EEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCC >Mature Secondary Structure AVKIKTKNGTIDVSNDVIATVVGGAATDNYGVVGMASKNQIRDNINEILKRENYARGVV EEEEECCCCEEEECCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEE IKQEANGIAIDVYIIVGYGTKISEISKNVQSKVKYSLESMLGISANSVNVFVQGVKLLND EEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]