| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492529
Identifier: 116492529
GI number: 116492529
Start: 789206
End: 789622
Strand: Direct
Name: 116492529
Synonym: PEPE_0761
Alternate gene names: NA
Gene position: 789206-789622 (Clockwise)
Preceding gene: 116492528
Following gene: 116492530
Centisome position: 43.07
GC content: 37.17
Gene sequence:
>417_bases ATGGCATACATGGATTACTACGAGTATCAAGCCATTATGAAAGAAAACGGATATGTTGAATCAGAAGCTGTGAAGATATT TTTAAAACGAGCAGCAGCGTTTAATAATCGTAAAAAAATATTTATGAAACAAGAATTATCTGACCGCAATAATGGCGTGC TACTGGAGTATATCCATAAAACTGAACTGCAGAGACAGAAAGCAGTCTGGGACGCCATAGATTGTGCAGAAATTGAAAAA CGCCAAGGATTTTATTTCATTGAACGAAGCGGCGGAGACAAATTTATGGCTGTCATGATAACTCAATATGAGGGCGATTT AAGCCGCATGACGGCAATTGAAAAAGCTACGTATAAATACTTTGAATTGATTGATGAAATGCGAAAACGAGCAGAGAAAG GACAATTAGCGAATTGA
Upstream 100 bases:
>100_bases GAAAGAATCGTGAAGGTGAGTTGGCGGATATTGACTTTACATTTATCGGTGAAGAAATGTTGTTTCTGGAATATGAGCCC AAAGAGGTGAAAAACTAACT
Downstream 100 bases:
>100_bases TAAGAATAGAAGTGGCAGGCGAGCCAGTTCCACAAGGTAGACCACGATTTAGTGGTCGTGGTGGATTTGTTAGAAGTTAT GACCCACCAAAATCAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MAYMDYYEYQAIMKENGYVESEAVKIFLKRAAAFNNRKKIFMKQELSDRNNGVLLEYIHKTELQRQKAVWDAIDCAEIEK RQGFYFIERSGGDKFMAVMITQYEGDLSRMTAIEKATYKYFELIDEMRKRAEKGQLAN
Sequences:
>Translated_138_residues MAYMDYYEYQAIMKENGYVESEAVKIFLKRAAAFNNRKKIFMKQELSDRNNGVLLEYIHKTELQRQKAVWDAIDCAEIEK RQGFYFIERSGGDKFMAVMITQYEGDLSRMTAIEKATYKYFELIDEMRKRAEKGQLAN >Mature_137_residues AYMDYYEYQAIMKENGYVESEAVKIFLKRAAAFNNRKKIFMKQELSDRNNGVLLEYIHKTELQRQKAVWDAIDCAEIEKR QGFYFIERSGGDKFMAVMITQYEGDLSRMTAIEKATYKYFELIDEMRKRAEKGQLAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16360; Mature: 16229
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYMDYYEYQAIMKENGYVESEAVKIFLKRAAAFNNRKKIFMKQELSDRNNGVLLEYIHK CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHEEEHHHCCCCCCCEEEEHHHH TELQRQKAVWDAIDCAEIEKRQGFYFIERSGGDKFMAVMITQYEGDLSRMTAIEKATYKY HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHH FELIDEMRKRAEKGQLAN HHHHHHHHHHHHCCCCCC >Mature Secondary Structure AYMDYYEYQAIMKENGYVESEAVKIFLKRAAAFNNRKKIFMKQELSDRNNGVLLEYIHK CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHEEEHHHCCCCCCCEEEEHHHH TELQRQKAVWDAIDCAEIEKRQGFYFIERSGGDKFMAVMITQYEGDLSRMTAIEKATYKY HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHH FELIDEMRKRAEKGQLAN HHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA