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The map label for this gene is ycaM [H]

Identifier: 116492433

GI number: 116492433

Start: 703568

End: 705013

Strand: Direct

Name: ycaM [H]

Synonym: PEPE_0664

Alternate gene names: 116492433

Gene position: 703568-705013 (Clockwise)

Preceding gene: 116492432

Following gene: 116492436

Centisome position: 38.4

GC content: 34.65

Gene sequence:

>1446_bases
ATGGAAAATTCGAAAGATAATCGAAGCTTTAGATGGTTTAATATCGCACTGATTTCATTTACAGCAGTTTGGGGTCTTAA
CAACGTTGTAAATAATTTTGCTAATCAAGGTTTAGTTGTTATTGTTTCATGGATATTAATAATGCTATTATATTTTATTC
CGTATACCTTGATGGTAGGTCAACTAGGTTCTACCTTTAGAGAAGCTGAGGGTGGTGTATCGTCATGGATGAAGGAACTT
TCCAATAGCCGTCTGGCTTATTTTGCGGCTTGGACATACTGGGTGGTCCATGTACCATACTTAGCCCAAAAGCCACAAAC
TATTTTGATTGGTTTTAGCTGGATGTTCAAAAACAACGGTAGTTTCGTTAATCAAACTCCATCTTATGTTGTTCAAGGAT
TAAGTTTGATAATCTTTTTAGCATTTGTTTGGATGGCTTCCAAAGGAGTGACAACTCTGAACCGAATTGGGAGTATTGCT
GGAATTGCGATGTTTATCATGTCAATTTTATTCATTATTTTAGGAATTTCAGCGCCATTTATCACGCATTCAGCTATTGC
CACAGCTCACATGGATCAATTTAGTACATATATGCCAAAATTTAATTTTAATTACTTTACAACGATTTCAATGCTAGTTT
TTGCGGTTGGTGGTGCAGAAAAAATTTCACCATACGTTAACAAAACCAGAAATCCAGCTAAAGAATTTCCGTTGGGAATG
ATTTTGTTGGCAATCATGGTGGCTATATCAGCAATTTTAGGTTCTTTTGCGATGGGAATGATTTTTGATGCACAACATAT
TCCTAATGACTTGATGGCCAATGGTTCTTATACGGCTTTCCAAATTTTGGGTAATCAATTCCACGTTGGTAATACATTAA
CTTGGATTTACGCCTTTGCTAATATCTTGGCTAATTCGGCAGCTTTAGCGATTTCGATCGATGCACCACTACGAATTTTG
TTAAATGATGCGGATAGTAATTATGTGCCAGCATTTCTTACTAGAAAAAATGCTAAAGGAATTGCTTATAATGGTTACAA
ATTAACTGCAATTTTAGTTTCAATTATTATTATTGTGCCAGCCTTAGGAATTGGCGGAATGAATGATTTGTATAATTGGT
TAATGAATTTAAACTCAATTGTTATGCCAATGCGGTACCTTTGGGTATTTGTGGCCTACATGTTATTGATGAAACAAATT
AATAATTATAAATCTGATTACGTATTTGTTAAAAATACTAAGATTGGTTTTGGCTTTGGACTATGGTGCTTTATTTTCAC
AGCTTTTGCATGTATTTTAGGAGTTATTCCAAAGGCTGATTTTGCAGCTAATCCAACTAGCTGGTGGTTCCAATTAGCGC
TTAATATTATCACACCATTTGCATTAATTATTTTAGGATTGATTTTACCGGTTATTGCACGGCGAAATCAGAATAAGTTA
GATTAG

Upstream 100 bases:

>100_bases
TTTTTTTATTACGTTAAACTTTTTAAATTGGAGTGGAAGATATATACTAAAAACATAAATCTATATGATATCGCTTACTT
TACGTTAGGGGGAGACGTTA

Downstream 100 bases:

>100_bases
GACTGAAATTTTTAATTTTATATTAGAGAATGAGAAAGGGAAATCCAACTCGTGGCGGAGTTGGGTTTCTCTTTTTTTAT
GATTCAACTTTACAATTCAA

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MENSKDNRSFRWFNIALISFTAVWGLNNVVNNFANQGLVVIVSWILIMLLYFIPYTLMVGQLGSTFREAEGGVSSWMKEL
SNSRLAYFAAWTYWVVHVPYLAQKPQTILIGFSWMFKNNGSFVNQTPSYVVQGLSLIIFLAFVWMASKGVTTLNRIGSIA
GIAMFIMSILFIILGISAPFITHSAIATAHMDQFSTYMPKFNFNYFTTISMLVFAVGGAEKISPYVNKTRNPAKEFPLGM
ILLAIMVAISAILGSFAMGMIFDAQHIPNDLMANGSYTAFQILGNQFHVGNTLTWIYAFANILANSAALAISIDAPLRIL
LNDADSNYVPAFLTRKNAKGIAYNGYKLTAILVSIIIIVPALGIGGMNDLYNWLMNLNSIVMPMRYLWVFVAYMLLMKQI
NNYKSDYVFVKNTKIGFGFGLWCFIFTAFACILGVIPKADFAANPTSWWFQLALNIITPFALIILGLILPVIARRNQNKL
D

Sequences:

>Translated_481_residues
MENSKDNRSFRWFNIALISFTAVWGLNNVVNNFANQGLVVIVSWILIMLLYFIPYTLMVGQLGSTFREAEGGVSSWMKEL
SNSRLAYFAAWTYWVVHVPYLAQKPQTILIGFSWMFKNNGSFVNQTPSYVVQGLSLIIFLAFVWMASKGVTTLNRIGSIA
GIAMFIMSILFIILGISAPFITHSAIATAHMDQFSTYMPKFNFNYFTTISMLVFAVGGAEKISPYVNKTRNPAKEFPLGM
ILLAIMVAISAILGSFAMGMIFDAQHIPNDLMANGSYTAFQILGNQFHVGNTLTWIYAFANILANSAALAISIDAPLRIL
LNDADSNYVPAFLTRKNAKGIAYNGYKLTAILVSIIIIVPALGIGGMNDLYNWLMNLNSIVMPMRYLWVFVAYMLLMKQI
NNYKSDYVFVKNTKIGFGFGLWCFIFTAFACILGVIPKADFAANPTSWWFQLALNIITPFALIILGLILPVIARRNQNKL
D
>Mature_481_residues
MENSKDNRSFRWFNIALISFTAVWGLNNVVNNFANQGLVVIVSWILIMLLYFIPYTLMVGQLGSTFREAEGGVSSWMKEL
SNSRLAYFAAWTYWVVHVPYLAQKPQTILIGFSWMFKNNGSFVNQTPSYVVQGLSLIIFLAFVWMASKGVTTLNRIGSIA
GIAMFIMSILFIILGISAPFITHSAIATAHMDQFSTYMPKFNFNYFTTISMLVFAVGGAEKISPYVNKTRNPAKEFPLGM
ILLAIMVAISAILGSFAMGMIFDAQHIPNDLMANGSYTAFQILGNQFHVGNTLTWIYAFANILANSAALAISIDAPLRIL
LNDADSNYVPAFLTRKNAKGIAYNGYKLTAILVSIIIIVPALGIGGMNDLYNWLMNLNSIVMPMRYLWVFVAYMLLMKQI
NNYKSDYVFVKNTKIGFGFGLWCFIFTAFACILGVIPKADFAANPTSWWFQLALNIITPFALIILGLILPVIARRNQNKL
D

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081798, Length=479, Percent_Identity=57.2025052192067, Blast_Score=582, Evalue=1e-167,
Organism=Escherichia coli, GI87082380, Length=411, Percent_Identity=25.0608272506083, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI48994921, Length=410, Percent_Identity=21.9512195121951, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1787768, Length=395, Percent_Identity=22.5316455696203, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 53699; Mature: 53699

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSKDNRSFRWFNIALISFTAVWGLNNVVNNFANQGLVVIVSWILIMLLYFIPYTLMVG
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QLGSTFREAEGGVSSWMKELSNSRLAYFAAWTYWVVHVPYLAQKPQTILIGFSWMFKNNG
HHHHHHHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHCCCCEEEEEEEEEEECCC
SFVNQTPSYVVQGLSLIIFLAFVWMASKGVTTLNRIGSIAGIAMFIMSILFIILGISAPF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ITHSAIATAHMDQFSTYMPKFNFNYFTTISMLVFAVGGAEKISPYVNKTRNPAKEFPLGM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCHHHHCCCCCHHHCCHHH
ILLAIMVAISAILGSFAMGMIFDAQHIPNDLMANGSYTAFQILGNQFHVGNTLTWIYAFA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCEEECCCHHHHHHHHH
NILANSAALAISIDAPLRILLNDADSNYVPAFLTRKNAKGIAYNGYKLTAILVSIIIIVP
HHHHCCCEEEEEECCCEEEEEECCCCCCCCHHEECCCCCCEEECCCHHHHHHHHHHHHHH
ALGIGGMNDLYNWLMNLNSIVMPMRYLWVFVAYMLLMKQINNYKSDYVFVKNTKIGFGFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH
LWCFIFTAFACILGVIPKADFAANPTSWWFQLALNIITPFALIILGLILPVIARRNQNKL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
D
C
>Mature Secondary Structure
MENSKDNRSFRWFNIALISFTAVWGLNNVVNNFANQGLVVIVSWILIMLLYFIPYTLMVG
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
QLGSTFREAEGGVSSWMKELSNSRLAYFAAWTYWVVHVPYLAQKPQTILIGFSWMFKNNG
HHHHHHHHHCCCHHHHHHHHCCCCEEHHHHHHHHHHHCCHHHCCCCEEEEEEEEEEECCC
SFVNQTPSYVVQGLSLIIFLAFVWMASKGVTTLNRIGSIAGIAMFIMSILFIILGISAPF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
ITHSAIATAHMDQFSTYMPKFNFNYFTTISMLVFAVGGAEKISPYVNKTRNPAKEFPLGM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCHHHHCCCCCHHHCCHHH
ILLAIMVAISAILGSFAMGMIFDAQHIPNDLMANGSYTAFQILGNQFHVGNTLTWIYAFA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCEEECCCHHHHHHHHH
NILANSAALAISIDAPLRILLNDADSNYVPAFLTRKNAKGIAYNGYKLTAILVSIIIIVP
HHHHCCCEEEEEECCCEEEEEECCCCCCCCHHEECCCCCCEEECCCHHHHHHHHHHHHHH
ALGIGGMNDLYNWLMNLNSIVMPMRYLWVFVAYMLLMKQINNYKSDYVFVKNTKIGFGFG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH
LWCFIFTAFACILGVIPKADFAANPTSWWFQLALNIITPFALIILGLILPVIARRNQNKL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]