| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is mfpsA [H]
Identifier: 116492407
GI number: 116492407
Start: 669125
End: 670141
Strand: Direct
Name: mfpsA [H]
Synonym: PEPE_0613
Alternate gene names: 116492407
Gene position: 669125-670141 (Clockwise)
Preceding gene: 116492406
Following gene: 116492408
Centisome position: 36.52
GC content: 37.07
Gene sequence:
>1017_bases ATGCCAATTAAGGTCAACATGTTTTCATCAGCTAGTAAGGTAAAGGGGCAAGGTGTCGGCAGTGCGTATGAAGAACTCAT TCGTTTGTTGAAGACCCATTTTCCAAAGCAAATCGATGTTTCAATCAATAAATTTACTAAGGCTGATATTAGTCACTATC ACACCATCGACCCTAATTTCTATTTATCAACCTTTTCTAAAAAAAGGGGAATTAAGGTCGGTTATGTGCACTTTTTACCG GAAACGATTGAGGGAAGTTTAAATATTCCACAACCTTTCCGTTCTATTTTTTATAAATACATTATCTCGTTTTATAAGCG AATGGATCATATTGTAGTGGTGAACCCCACATTTATTGATAAATTAGTTGCTTATGGGATTAGTCGGGATATTATTACTT ATATTCCCAATTTTGTCCGTAAGAATGAATTTTACCGTTTTACAGAGGCAAATCGGGATGCGGTACGGGAACGTTTGGAG GTTAATAACCGTTTTACCGTGCTAGGCATCGGACAAGTCCAAGAACGTAAAGGGGTTAAAGATTTTATCAAACTTGCGGA GAATAACCCTGATAAGTATTTTATCTGGGCAGGAGGTTTTTCATTTGGTCGATTAACCGATGGATATGCCGATTTGAAGC AGGTGGTTGATAATCCACCTCGTAATTTAAAATTTACGGGGATTGTAGATCGTAATGCGTTGGTAGAATACTATAATGCG GCCGACCTATTTCTATTACCTTCATACAACGAGTTATTTCCAATGTCGGTTTTAGAAGCCTTTAGCTGTGGTGTTCCAGT CATGTTGAGGGACTTAGAGTTGTATCATTCCATTATTAAGGGGTACTATATACCTACTCAAGATTATGAGGATATGAATA CTCAACTCAAATTAGTATCAGAAGATAAAGAAAGGCTGAATAAGTTTAAGCAGCTATCAGACGAAGCTTCGGAAGAATAC TCTGAAGACCATCTAGCTGATATATGGTTAGACTTTTATTCATCTTTGACCAAATAG
Upstream 100 bases:
>100_bases AGTGCAATTAGTACACATACAGATTTAGAGTTAGACGAAGATTCTGAATAGAATCGGGGTTAAAATCAGAATAATTTTGT TTAATGTTAGGGGTTAAGGT
Downstream 100 bases:
>100_bases GGGGAGTTTATCTATGTCAAGGAGGAATAAAGTAGTCCTTGCGGTGATGATTCTAGCTGGTATTATAATTTTTGGCTTTT CATTACGAAACGTTAATTTG
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MPIKVNMFSSASKVKGQGVGSAYEELIRLLKTHFPKQIDVSINKFTKADISHYHTIDPNFYLSTFSKKRGIKVGYVHFLP ETIEGSLNIPQPFRSIFYKYIISFYKRMDHIVVVNPTFIDKLVAYGISRDIITYIPNFVRKNEFYRFTEANRDAVRERLE VNNRFTVLGIGQVQERKGVKDFIKLAENNPDKYFIWAGGFSFGRLTDGYADLKQVVDNPPRNLKFTGIVDRNALVEYYNA ADLFLLPSYNELFPMSVLEAFSCGVPVMLRDLELYHSIIKGYYIPTQDYEDMNTQLKLVSEDKERLNKFKQLSDEASEEY SEDHLADIWLDFYSSLTK
Sequences:
>Translated_338_residues MPIKVNMFSSASKVKGQGVGSAYEELIRLLKTHFPKQIDVSINKFTKADISHYHTIDPNFYLSTFSKKRGIKVGYVHFLP ETIEGSLNIPQPFRSIFYKYIISFYKRMDHIVVVNPTFIDKLVAYGISRDIITYIPNFVRKNEFYRFTEANRDAVRERLE VNNRFTVLGIGQVQERKGVKDFIKLAENNPDKYFIWAGGFSFGRLTDGYADLKQVVDNPPRNLKFTGIVDRNALVEYYNA ADLFLLPSYNELFPMSVLEAFSCGVPVMLRDLELYHSIIKGYYIPTQDYEDMNTQLKLVSEDKERLNKFKQLSDEASEEY SEDHLADIWLDFYSSLTK >Mature_337_residues PIKVNMFSSASKVKGQGVGSAYEELIRLLKTHFPKQIDVSINKFTKADISHYHTIDPNFYLSTFSKKRGIKVGYVHFLPE TIEGSLNIPQPFRSIFYKYIISFYKRMDHIVVVNPTFIDKLVAYGISRDIITYIPNFVRKNEFYRFTEANRDAVRERLEV NNRFTVLGIGQVQERKGVKDFIKLAENNPDKYFIWAGGFSFGRLTDGYADLKQVVDNPPRNLKFTGIVDRNALVEYYNAA DLFLLPSYNELFPMSVLEAFSCGVPVMLRDLELYHSIIKGYYIPTQDYEDMNTQLKLVSEDKERLNKFKQLSDEASEEYS EDHLADIWLDFYSSLTK
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR000368 [H]
Pfam domain/function: PF00534 Glycos_transf_1; PF00862 Sucrose_synth [H]
EC number: =2.4.1.246 [H]
Molecular weight: Translated: 39266; Mature: 39135
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKVNMFSSASKVKGQGVGSAYEELIRLLKTHFPKQIDVSINKFTKADISHYHTIDPNF CCEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCEEECCCCC YLSTFSKKRGIKVGYVHFLPETIEGSLNIPQPFRSIFYKYIISFYKRMDHIVVVNPTFID EEEHHHHCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHH KLVAYGISRDIITYIPNFVRKNEFYRFTEANRDAVRERLEVNNRFTVLGIGQVQERKGVK HHHHHCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCEEEEECCHHHHHCCHH DFIKLAENNPDKYFIWAGGFSFGRLTDGYADLKQVVDNPPRNLKFTGIVDRNALVEYYNA HHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHCC ADLFLLPSYNELFPMSVLEAFSCGVPVMLRDLELYHSIIKGYYIPTQDYEDMNTQLKLVS CCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEH EDKERLNKFKQLSDEASEEYSEDHLADIWLDFYSSLTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PIKVNMFSSASKVKGQGVGSAYEELIRLLKTHFPKQIDVSINKFTKADISHYHTIDPNF CEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCEEECCCCC YLSTFSKKRGIKVGYVHFLPETIEGSLNIPQPFRSIFYKYIISFYKRMDHIVVVNPTFID EEEHHHHCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHH KLVAYGISRDIITYIPNFVRKNEFYRFTEANRDAVRERLEVNNRFTVLGIGQVQERKGVK HHHHHCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCEEEEECCHHHHHCCHH DFIKLAENNPDKYFIWAGGFSFGRLTDGYADLKQVVDNPPRNLKFTGIVDRNALVEYYNA HHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHCC ADLFLLPSYNELFPMSVLEAFSCGVPVMLRDLELYHSIIKGYYIPTQDYEDMNTQLKLVS CCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEH EDKERLNKFKQLSDEASEEYSEDHLADIWLDFYSSLTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]