Click here to switch to the map view.

The map label for this gene is ywqE [H]

Identifier: 116492362

GI number: 116492362

Start: 622306

End: 623097

Strand: Direct

Name: ywqE [H]

Synonym: PEPE_0567

Alternate gene names: 116492362

Gene position: 622306-623097 (Clockwise)

Preceding gene: 116492361

Following gene: 116492363

Centisome position: 33.96

GC content: 39.65

Gene sequence:

>792_bases
ATGATGAATTTAATTGATTTACATTGTCATATACTGCCAGGTGTCGACGACGGTGCCAAAGATTTACCAATGGCACTCGA
CATGGCTCGTGAAGCAGTTAAACAAAACATTACACATATTTTATTAACTCCGCATCACATGGACGGCATGTATACGAACC
ATAAAGCAGACGTAATTCGTAAGACAGCGGCTTTCCAACAAGAACTAGATGCTGCTGGAATTCCTTTGACGGTTTTTCCA
GGTCAAGAAGTTCATTTGACGGGAGAACTGTTAGATGCAATCGATAATGACGATATCTTGTTTATGGATGAGGGGGGGAA
GTATTTGTTATTAGAACTTCCTCACAGTGGAATTCCAGAATATACGGAAACGGTAATTTTCGAATTGCTAGCTCGGGGAA
TCACTCCGGTAATTGCCCATCCAGAGCGCAATCATGGCTTTCAAAAAAATCCCGATCGGCTATACGACTTTGTGGAGATG
GGGTGCTTAACCCAACTTACCAGTAGTAGCTATCTGGGAGTGTTTGGAGAAAAGGTAGAGCAATTAACGCAAAAAATTAT
TGATGCGCGTTTAGGCTTTGTCTTTTCATCTGATGCACACAATTTTGAAGGACGGCGTTTTTTAATGCAAGACGCTTTTA
ATAAATTAACTAAAGAAACGACAGATCGGAAGGCCGAACTTTTCAACTACAATGCTAAGTCAATTGTGAATGGGGATTCA
ATTAAGACGGAAAGCATTCTGCACATGTCTTCTACAAAAAAGAAAAAAAAGAAAAGATTCTGGTTATTTTAA

Upstream 100 bases:

>100_bases
CTAACATTCTAGGGGCAATCTTAAACCGAGCAACCGCTGAAAAATCAACAGGTTATTACGGTGGTTACTATGGTGGTTAT
TATGGGACGGATAATAAATA

Downstream 100 bases:

>100_bases
TGGAGATTAAGATGGTTGAAAACAAGAAAGTTTTAATAGATGAACAAGCTCAAAATCAGCGATACGTTTATCGCTTTTTC
AAGAGGATGCTAGATATCGT

Product: capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MMNLIDLHCHILPGVDDGAKDLPMALDMAREAVKQNITHILLTPHHMDGMYTNHKADVIRKTAAFQQELDAAGIPLTVFP
GQEVHLTGELLDAIDNDDILFMDEGGKYLLLELPHSGIPEYTETVIFELLARGITPVIAHPERNHGFQKNPDRLYDFVEM
GCLTQLTSSSYLGVFGEKVEQLTQKIIDARLGFVFSSDAHNFEGRRFLMQDAFNKLTKETTDRKAELFNYNAKSIVNGDS
IKTESILHMSSTKKKKKKRFWLF

Sequences:

>Translated_263_residues
MMNLIDLHCHILPGVDDGAKDLPMALDMAREAVKQNITHILLTPHHMDGMYTNHKADVIRKTAAFQQELDAAGIPLTVFP
GQEVHLTGELLDAIDNDDILFMDEGGKYLLLELPHSGIPEYTETVIFELLARGITPVIAHPERNHGFQKNPDRLYDFVEM
GCLTQLTSSSYLGVFGEKVEQLTQKIIDARLGFVFSSDAHNFEGRRFLMQDAFNKLTKETTDRKAELFNYNAKSIVNGDS
IKTESILHMSSTKKKKKKRFWLF
>Mature_263_residues
MMNLIDLHCHILPGVDDGAKDLPMALDMAREAVKQNITHILLTPHHMDGMYTNHKADVIRKTAAFQQELDAAGIPLTVFP
GQEVHLTGELLDAIDNDDILFMDEGGKYLLLELPHSGIPEYTETVIFELLARGITPVIAHPERNHGFQKNPDRLYDFVEM
GCLTQLTSSSYLGVFGEKVEQLTQKIIDARLGFVFSSDAHNFEGRRFLMQDAFNKLTKETTDRKAELFNYNAKSIVNGDS
IKTESILHMSSTKKKKKKRFWLF

Specific function: Dephosphorylates the phosphotyrosine-containing proteins YwqD, YwqF and Ssb [H]

COG id: COG4464

COG function: function code GM; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsB/CapC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016667
- InterPro:   IPR004013
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 29792; Mature: 29792

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNLIDLHCHILPGVDDGAKDLPMALDMAREAVKQNITHILLTPHHMDGMYTNHKADVIR
CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHH
KTAAFQQELDAAGIPLTVFPGQEVHLTGELLDAIDNDDILFMDEGGKYLLLELPHSGIPE
HHHHHHHHHHHCCCCEEECCCCEEEEHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCH
YTETVIFELLARGITPVIAHPERNHGFQKNPDRLYDFVEMGCLTQLTSSSYLGVFGEKVE
HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QLTQKIIDARLGFVFSSDAHNFEGRRFLMQDAFNKLTKETTDRKAELFNYNAKSIVNGDS
HHHHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCC
IKTESILHMSSTKKKKKKRFWLF
CCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMNLIDLHCHILPGVDDGAKDLPMALDMAREAVKQNITHILLTPHHMDGMYTNHKADVIR
CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHH
KTAAFQQELDAAGIPLTVFPGQEVHLTGELLDAIDNDDILFMDEGGKYLLLELPHSGIPE
HHHHHHHHHHHCCCCEEECCCCEEEEHHHHHHHCCCCCEEEEECCCCEEEEECCCCCCCH
YTETVIFELLARGITPVIAHPERNHGFQKNPDRLYDFVEMGCLTQLTSSSYLGVFGEKVE
HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QLTQKIIDARLGFVFSSDAHNFEGRRFLMQDAFNKLTKETTDRKAELFNYNAKSIVNGDS
HHHHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCC
IKTESILHMSSTKKKKKKRFWLF
CCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]