Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492351

Identifier: 116492351

GI number: 116492351

Start: 612292

End: 613263

Strand: Direct

Name: 116492351

Synonym: PEPE_0556

Alternate gene names: NA

Gene position: 612292-613263 (Clockwise)

Preceding gene: 116492350

Following gene: 116492353

Centisome position: 33.41

GC content: 37.14

Gene sequence:

>972_bases
ATGAAAAAAATATTCACGTTGGTATTTATATTTGTAATCAGCATTCTAACTGCGACGAATGTACATGCTGATCATAAACT
TGCTAGTTATTCAGTGACACCCATTTTTTCGGAACATCAGACGGATGGAGCCGATAGCTATTTTGACATCAAATGGCCAC
CAGCTAGTAAGGAATCATTTGGTATTAAAATCACAAATAATACTAAAAAGACCAAGCGATTTGAAATTGAAGTGAACAAA
GCTCGGACTAATCGTAACGGCATTGTTGACTATTCTGATCGTACTCCGGAAAAAGCTAATACGGTTTACAAATTGACTCA
AATGATTAGGTTGCCTAAAGAAGTCGAAGTTACTCCCAACAGTAGCCAAATTATTCACGGCAGCATTAGTTTTCCAGCTA
AAGATTTCAATGGAATTTTGATGGCTGGATTACATTTTACGGAGAAAACGACAACAGCAAAGAAAAATACAGTTTCTAAC
ACGGTTGCTTATAACATTCCGTTCGTAATCCGCGGAAATCATGACCAACGTCCCAAACCACGGTTATCCCTAGATCAATT
GAAGATGACTAAACCTAACTTGAGTACTTACGAATTAGATGCAAAGCTTACCAACCATCATCAAAATTTACTTAAGAGTG
TCAAAACGGTTTCGTCCATCAAAAATATGGATAATAAAACCCTCAAAAAGGAAACTAAGCGGATTGACATTACGCCTGAA
ACAACTTTTGAGAATCCTATCCAAGTACCTAAAAATATAAAAGCAGGTCAATACAAGCTTGTTTTGACCATGCAACATGG
AAAAGATCATTGGAAATTTGAAAAGAACTTCAAGATTAAGCCAGCTGATTTGAAGGTCGCTAAGCGCCATCAGATTCAAA
ATCATTCGGCCTTATTCATCGGACTGGCGGTAATTGCGCTCATCGTAATTGGCGTTGGCTGGATTATATTCAAGAAGCTA
AAACGAAAATAG

Upstream 100 bases:

>100_bases
ATGGAATTTAACTAAGACTCAAACAGAACAAATTACAGAATAGCACCATTATTCCGAGGAGAGACTTAGTTCTCTCTTCT
TTTTTTGAAAAGAGATCGAT

Downstream 100 bases:

>100_bases
TTTTTTAACCCAAAAGAAGGCTCGCCGTTAAGCGAACCTTCTTTTTATTTGTCGTCTTTATGCATTTTATCTTTGAGTTC
TTCCATGGCGCCTTCAGCTG

Product: cell surface protein

Products: NA

Alternate protein names: C-Terminal Membrane Anchored Cell Surface Protein; Secreted Protein

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKKIFTLVFIFVISILTATNVHADHKLASYSVTPIFSEHQTDGADSYFDIKWPPASKESFGIKITNNTKKTKRFEIEVNK
ARTNRNGIVDYSDRTPEKANTVYKLTQMIRLPKEVEVTPNSSQIIHGSISFPAKDFNGILMAGLHFTEKTTTAKKNTVSN
TVAYNIPFVIRGNHDQRPKPRLSLDQLKMTKPNLSTYELDAKLTNHHQNLLKSVKTVSSIKNMDNKTLKKETKRIDITPE
TTFENPIQVPKNIKAGQYKLVLTMQHGKDHWKFEKNFKIKPADLKVAKRHQIQNHSALFIGLAVIALIVIGVGWIIFKKL
KRK

Sequences:

>Translated_323_residues
MKKIFTLVFIFVISILTATNVHADHKLASYSVTPIFSEHQTDGADSYFDIKWPPASKESFGIKITNNTKKTKRFEIEVNK
ARTNRNGIVDYSDRTPEKANTVYKLTQMIRLPKEVEVTPNSSQIIHGSISFPAKDFNGILMAGLHFTEKTTTAKKNTVSN
TVAYNIPFVIRGNHDQRPKPRLSLDQLKMTKPNLSTYELDAKLTNHHQNLLKSVKTVSSIKNMDNKTLKKETKRIDITPE
TTFENPIQVPKNIKAGQYKLVLTMQHGKDHWKFEKNFKIKPADLKVAKRHQIQNHSALFIGLAVIALIVIGVGWIIFKKL
KRK
>Mature_323_residues
MKKIFTLVFIFVISILTATNVHADHKLASYSVTPIFSEHQTDGADSYFDIKWPPASKESFGIKITNNTKKTKRFEIEVNK
ARTNRNGIVDYSDRTPEKANTVYKLTQMIRLPKEVEVTPNSSQIIHGSISFPAKDFNGILMAGLHFTEKTTTAKKNTVSN
TVAYNIPFVIRGNHDQRPKPRLSLDQLKMTKPNLSTYELDAKLTNHHQNLLKSVKTVSSIKNMDNKTLKKETKRIDITPE
TTFENPIQVPKNIKAGQYKLVLTMQHGKDHWKFEKNFKIKPADLKVAKRHQIQNHSALFIGLAVIALIVIGVGWIIFKKL
KRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36805; Mature: 36805

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFTLVFIFVISILTATNVHADHKLASYSVTPIFSEHQTDGADSYFDIKWPPASKESF
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCE
GIKITNNTKKTKRFEIEVNKARTNRNGIVDYSDRTPEKANTVYKLTQMIRLPKEVEVTPN
EEEEECCCCCCEEEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCC
SSQIIHGSISFPAKDFNGILMAGLHFTEKTTTAKKNTVSNTVAYNIPFVIRGNHDQRPKP
CCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCC
RLSLDQLKMTKPNLSTYELDAKLTNHHQNLLKSVKTVSSIKNMDNKTLKKETKRIDITPE
CCCHHHHEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCC
TTFENPIQVPKNIKAGQYKLVLTMQHGKDHWKFEKNFKIKPADLKVAKRHQIQNHSALFI
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEECCCCEECCCCHHHHHHHHCCCCCHHHH
GLAVIALIVIGVGWIIFKKLKRK
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIFTLVFIFVISILTATNVHADHKLASYSVTPIFSEHQTDGADSYFDIKWPPASKESF
CHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCE
GIKITNNTKKTKRFEIEVNKARTNRNGIVDYSDRTPEKANTVYKLTQMIRLPKEVEVTPN
EEEEECCCCCCEEEEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCC
SSQIIHGSISFPAKDFNGILMAGLHFTEKTTTAKKNTVSNTVAYNIPFVIRGNHDQRPKP
CCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCEEEECCCCCCCCC
RLSLDQLKMTKPNLSTYELDAKLTNHHQNLLKSVKTVSSIKNMDNKTLKKETKRIDITPE
CCCHHHHEECCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCC
TTFENPIQVPKNIKAGQYKLVLTMQHGKDHWKFEKNFKIKPADLKVAKRHQIQNHSALFI
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEECCCCEECCCCHHHHHHHHCCCCCHHHH
GLAVIALIVIGVGWIIFKKLKRK
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA