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The map label for this gene is garP [H]

Identifier: 116492346

GI number: 116492346

Start: 609241

End: 609441

Strand: Direct

Name: garP [H]

Synonym: PEPE_0551

Alternate gene names: 116492346

Gene position: 609241-609441 (Clockwise)

Preceding gene: 116492345

Following gene: 116492347

Centisome position: 33.25

GC content: 32.84

Gene sequence:

>201_bases
ATGGAAAGTAGTCATAAAAAACTATCTACCAATATGCGCTATGTTATTTTAGCGTTAGTATTCATTAATATCGTAATTAA
TTACATGGACAGAACCAATGTTTCAATTGCAATGCCGGAACTTTCTAAAGAAATTCATTTATCAACGGTTCAACAGGGGC
TAATCTTTTCAGCGTTTGGTTGGATTTATGCTGCAATGTAA

Upstream 100 bases:

>100_bases
AAACGATTGAGACTAAAAAATTAAAATTTGAATTATTACAAACCAATGGTAGTCAACAAATTTCATTAAATGAGATTCGA
GTTTATTAAGGAGGTTTACT

Downstream 100 bases:

>100_bases
ATTCCAGGTGGTATTCTATTAGATAAATTTGGTTCTAGAATTATGTATTTCATCAGTCTATTTGGTTGGTCCTTAGTTAC
TGTTTTTCAAGCCTTTATTG

Product: sugar phosphate permease

Products: NA

Alternate protein names: D-galactarate permease [H]

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MESSHKKLSTNMRYVILALVFINIVINYMDRTNVSIAMPELSKEIHLSTVQQGLIFSAFGWIYAAM

Sequences:

>Translated_66_residues
MESSHKKLSTNMRYVILALVFINIVINYMDRTNVSIAMPELSKEIHLSTVQQGLIFSAFGWIYAAM
>Mature_66_residues
MESSHKKLSTNMRYVILALVFINIVINYMDRTNVSIAMPELSKEIHLSTVQQGLIFSAFGWIYAAM

Specific function: Uptake of D-galactarate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI1789515, Length=63, Percent_Identity=49.2063492063492, Blast_Score=66, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 7537; Mature: 7537

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.6 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSHKKLSTNMRYVILALVFINIVINYMDRTNVSIAMPELSKEIHLSTVQQGLIFSAFG
CCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
WIYAAM
HHHHCC
>Mature Secondary Structure
MESSHKKLSTNMRYVILALVFINIVINYMDRTNVSIAMPELSKEIHLSTVQQGLIFSAFG
CCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
WIYAAM
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]