Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492323

Identifier: 116492323

GI number: 116492323

Start: 580444

End: 580689

Strand: Direct

Name: 116492323

Synonym: PEPE_0525

Alternate gene names: NA

Gene position: 580444-580689 (Clockwise)

Preceding gene: 116492322

Following gene: 116492324

Centisome position: 31.68

GC content: 32.93

Gene sequence:

>246_bases
ATGGATAATATGAGAAAAGTGCAGAGTGTATCAGAAGAGAATATGAATGAAGTTCGAATTTTTGAGATGTGTAGAATCCA
AGTAAAAGCAGTTCAATCCGAAAAAATAAAAGTATCTGTTTCAGAAAGCTCTGCTTCTTTTCTTAAGTATCTATTGGCAA
TTCAACTCAAGAAGTATTGCAAGGTTTATTCATGGACGTTAAGAATGAGGTCGTATATAAACAAGATCTTTTTGTTGGGA
GAGTGA

Upstream 100 bases:

>100_bases
AGCTATATTATAATATTAAACCAACAGTATAGATGTAACAATAGAGTGTGCTTTAGTGAGTCAGATAGAACGTGTTGAAA
TATACAAAGGGGGGTTAATA

Downstream 100 bases:

>100_bases
GGGGAATTAATGCTTCACCGTATCAAATTGTGCAGTCAGCCATTTTGATGAACGCAACCCATATTATATTGGCACACAAC
CATCCTAGCCAAGAAGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MDNMRKVQSVSEENMNEVRIFEMCRIQVKAVQSEKIKVSVSESSASFLKYLLAIQLKKYCKVYSWTLRMRSYINKIFLLG
E

Sequences:

>Translated_81_residues
MDNMRKVQSVSEENMNEVRIFEMCRIQVKAVQSEKIKVSVSESSASFLKYLLAIQLKKYCKVYSWTLRMRSYINKIFLLG
E
>Mature_81_residues
MDNMRKVQSVSEENMNEVRIFEMCRIQVKAVQSEKIKVSVSESSASFLKYLLAIQLKKYCKVYSWTLRMRSYINKIFLLG
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9589; Mature: 9589

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNMRKVQSVSEENMNEVRIFEMCRIQVKAVQSEKIKVSVSESSASFLKYLLAIQLKKYC
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
KVYSWTLRMRSYINKIFLLGE
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDNMRKVQSVSEENMNEVRIFEMCRIQVKAVQSEKIKVSVSESSASFLKYLLAIQLKKYC
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
KVYSWTLRMRSYINKIFLLGE
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA