| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is mco [H]
Identifier: 116492302
GI number: 116492302
Start: 555105
End: 556634
Strand: Direct
Name: mco [H]
Synonym: PEPE_0502
Alternate gene names: 116492302
Gene position: 555105-556634 (Clockwise)
Preceding gene: 116492300
Following gene: 116492303
Centisome position: 30.29
GC content: 48.17
Gene sequence:
>1530_bases ATGAAAAACTATACGGACTATTTCTTTGATGAGCCAGCGTTTGATCTACACGATGGTGGGTACGTGCCGCTTGAGGTCAG TGATGCGCCTGAGAAGCCCTTAAATGTGCCGCCGTTGTTGAAACCGGATAAAGAGACAGCGACCGACGTTTATTACACGG TGACAACAGAGGCTGGGGAAACACAACTGTTGCCAGGGGCGAAGACCAAGACGTGGGGCTATAATGCCAGTCTGTTAGGT CAGACGATTGTGTATCGCCGTGGTCAACATACGCATGTGACATTGAAAAACACCCTGCCTGAGTTGACCACTTTTCATTG GCATGGGGCTAATGTCAGTGGCCCTTATGTTGATGGCGGATGCCATGCGCCGCTTTATCCGGGTGAAAGTAAGCATATCG ACTTCACATTGGACCAACCGGCGACGACTTTGTGGCTGCACGCGCATCCATGCCCATCCACGGCCGAGCAGGTTTGGCAT GGTTTGGCTGCCATGGTGATTGTCAAAGACGACCATGAAGCCAGCCTGCCATTGCCAAGGAACTATGGCGTTAACGATAT TCCAGTCATTTTGCAAGATCGACGTTTTCACGAAAACAATCAGTGGGACTACCGGGCTGATTATGATCCTGACGGTGTTG CTGGGCCAACCGCAATGATTAACGGTACAATCAATCCCTATTTTGATGTCACCACGCAAAAGGTCCGGTTGCGTTTTCTA GATGGTGCTAATCGCCGTGAATGGCGGTTGCATTTTTCTAATGACTTACCATTTACGCAAATTGGTGGAGATGGCTCATT GTTACCGGATCCGGTCAAATTCACCCATCTAATGCTAACTTGTGCTGAGCGTGCCGAAGTGATTGTTGATTTTGGCCAAT ACCATGAAGGCGATGTGGTTACCTTATATACGGATGATGTGCCATTGTTAAAGTTCCGCATTCATGCGTTCAAACCGGAT CAGACAACTTTGCCTGATAAGTTGTTCGACGTGAAGGCACCAGTGGTTGATCCGGATTTGCCAGTTCGCCATGTTGTGAT GCAGGGAATGGACGAAAGTGTCGCGATCGATGGTAAAAAATTTGCTATGCAGCGGATTGATGCCACGCAGGCGATTGGCA AAGCCCAGTACTGGGATGTTACCAATAGCAATGATGCGCCTGGAATGGTTCATCCATTCCATGTGCATGGAACCCAATTC TTAGTCTTGTCGCGGAATGGGCATGCGCCGTATCCAAATGAACATGGTTTCAAAGATACCGTTGGCGTGAATCCTGGGGA AACGGTTCGGCTGCTGGTTCGCTTTGATCTGCCAGGGGTTTATATGTATCACTGTCATATCATTGAGCACGAAGATGGCG GCATGATGGCACAGATTGAAGCATTCGATCCAGCCAAGCCAAAGCAAGAATATAAATTGATGGATATGGATACGTTAATG ATGGCCTTGGCTAAAGAACGTGGCGTCAAACCATCTGAGATTTGGATGGGCGGTATGCAGTCTTATGAAAAAATGGGAAT GAAAATGTAA
Upstream 100 bases:
>100_bases AGACCTATACCATTTTTCGCTACTACTTTAGATTAATTCTAAATTATGTTTATGGCAACCCTAAAAAATGTTAAAATTCT TGTCAGAGGGGGAAATCACG
Downstream 100 bases:
>100_bases ACGTCCCACAATACTAATATAGAAAAGATGATTTTAATATGCACTCTCCAACGATCAAACATCGCGGGGCTTTTGTCGCC ACGTTACTGACAGGTACCTT
Product: putative multicopper oxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MKNYTDYFFDEPAFDLHDGGYVPLEVSDAPEKPLNVPPLLKPDKETATDVYYTVTTEAGETQLLPGAKTKTWGYNASLLG QTIVYRRGQHTHVTLKNTLPELTTFHWHGANVSGPYVDGGCHAPLYPGESKHIDFTLDQPATTLWLHAHPCPSTAEQVWH GLAAMVIVKDDHEASLPLPRNYGVNDIPVILQDRRFHENNQWDYRADYDPDGVAGPTAMINGTINPYFDVTTQKVRLRFL DGANRREWRLHFSNDLPFTQIGGDGSLLPDPVKFTHLMLTCAERAEVIVDFGQYHEGDVVTLYTDDVPLLKFRIHAFKPD QTTLPDKLFDVKAPVVDPDLPVRHVVMQGMDESVAIDGKKFAMQRIDATQAIGKAQYWDVTNSNDAPGMVHPFHVHGTQF LVLSRNGHAPYPNEHGFKDTVGVNPGETVRLLVRFDLPGVYMYHCHIIEHEDGGMMAQIEAFDPAKPKQEYKLMDMDTLM MALAKERGVKPSEIWMGGMQSYEKMGMKM
Sequences:
>Translated_509_residues MKNYTDYFFDEPAFDLHDGGYVPLEVSDAPEKPLNVPPLLKPDKETATDVYYTVTTEAGETQLLPGAKTKTWGYNASLLG QTIVYRRGQHTHVTLKNTLPELTTFHWHGANVSGPYVDGGCHAPLYPGESKHIDFTLDQPATTLWLHAHPCPSTAEQVWH GLAAMVIVKDDHEASLPLPRNYGVNDIPVILQDRRFHENNQWDYRADYDPDGVAGPTAMINGTINPYFDVTTQKVRLRFL DGANRREWRLHFSNDLPFTQIGGDGSLLPDPVKFTHLMLTCAERAEVIVDFGQYHEGDVVTLYTDDVPLLKFRIHAFKPD QTTLPDKLFDVKAPVVDPDLPVRHVVMQGMDESVAIDGKKFAMQRIDATQAIGKAQYWDVTNSNDAPGMVHPFHVHGTQF LVLSRNGHAPYPNEHGFKDTVGVNPGETVRLLVRFDLPGVYMYHCHIIEHEDGGMMAQIEAFDPAKPKQEYKLMDMDTLM MALAKERGVKPSEIWMGGMQSYEKMGMKM >Mature_509_residues MKNYTDYFFDEPAFDLHDGGYVPLEVSDAPEKPLNVPPLLKPDKETATDVYYTVTTEAGETQLLPGAKTKTWGYNASLLG QTIVYRRGQHTHVTLKNTLPELTTFHWHGANVSGPYVDGGCHAPLYPGESKHIDFTLDQPATTLWLHAHPCPSTAEQVWH GLAAMVIVKDDHEASLPLPRNYGVNDIPVILQDRRFHENNQWDYRADYDPDGVAGPTAMINGTINPYFDVTTQKVRLRFL DGANRREWRLHFSNDLPFTQIGGDGSLLPDPVKFTHLMLTCAERAEVIVDFGQYHEGDVVTLYTDDVPLLKFRIHAFKPD QTTLPDKLFDVKAPVVDPDLPVRHVVMQGMDESVAIDGKKFAMQRIDATQAIGKAQYWDVTNSNDAPGMVHPFHVHGTQF LVLSRNGHAPYPNEHGFKDTVGVNPGETVRLLVRFDLPGVYMYHCHIIEHEDGGMMAQIEAFDPAKPKQEYKLMDMDTLM MALAKERGVKPSEIWMGGMQSYEKMGMKM
Specific function: May be involved in copper homeostasis and oxidative stress response [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=494, Percent_Identity=35.0202429149798, Blast_Score=246, Evalue=3e-66, Organism=Escherichia coli, GI1789394, Length=462, Percent_Identity=31.8181818181818, Blast_Score=207, Evalue=2e-54,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR002355 - InterPro: IPR008972 [H]
Pfam domain/function: PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 57299; Mature: 57299
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00079 MULTICOPPER_OXIDASE1 ; PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNYTDYFFDEPAFDLHDGGYVPLEVSDAPEKPLNVPPLLKPDKETATDVYYTVTTEAGE CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC TQLLPGAKTKTWGYNASLLGQTIVYRRGQHTHVTLKNTLPELTTFHWHGANVSGPYVDGG EEECCCCCCCCCCCCHHHHHCCHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCEECCC CHAPLYPGESKHIDFTLDQPATTLWLHAHPCPSTAEQVWHGLAAMVIVKDDHEASLPLPR CCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHCCEEEEEEEECCCCCCCCCCC NYGVNDIPVILQDRRFHENNQWDYRADYDPDGVAGPTAMINGTINPYFDVTTQKVRLRFL CCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCEEEECCCCCEEECEEEEEEEEEE DGANRREWRLHFSNDLPFTQIGGDGSLLPDPVKFTHLMLTCAERAEVIVDFGQYHEGDVV CCCCCEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCEE TLYTDDVPLLKFRIHAFKPDQTTLPDKLFDVKAPVVDPDLPVRHVVMQGMDESVAIDGKK EEEECCCCEEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCEEECCHH FAMQRIDATQAIGKAQYWDVTNSNDAPGMVHPFHVHGTQFLVLSRNGHAPYPNEHGFKDT HHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCC VGVNPGETVRLLVRFDLPGVYMYHCHIIEHEDGGMMAQIEAFDPAKPKQEYKLMDMDTLM CCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEECCCCCCCHHHEEEECHHHHH MALAKERGVKPSEIWMGGMQSYEKMGMKM HHHHHHHCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKNYTDYFFDEPAFDLHDGGYVPLEVSDAPEKPLNVPPLLKPDKETATDVYYTVTTEAGE CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC TQLLPGAKTKTWGYNASLLGQTIVYRRGQHTHVTLKNTLPELTTFHWHGANVSGPYVDGG EEECCCCCCCCCCCCHHHHHCCHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCEECCC CHAPLYPGESKHIDFTLDQPATTLWLHAHPCPSTAEQVWHGLAAMVIVKDDHEASLPLPR CCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHCCEEEEEEEECCCCCCCCCCC NYGVNDIPVILQDRRFHENNQWDYRADYDPDGVAGPTAMINGTINPYFDVTTQKVRLRFL CCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCEEEECCCCCEEECEEEEEEEEEE DGANRREWRLHFSNDLPFTQIGGDGSLLPDPVKFTHLMLTCAERAEVIVDFGQYHEGDVV CCCCCEEEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCEE TLYTDDVPLLKFRIHAFKPDQTTLPDKLFDVKAPVVDPDLPVRHVVMQGMDESVAIDGKK EEEECCCCEEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCCCCCEEECCHH FAMQRIDATQAIGKAQYWDVTNSNDAPGMVHPFHVHGTQFLVLSRNGHAPYPNEHGFKDT HHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCC VGVNPGETVRLLVRFDLPGVYMYHCHIIEHEDGGMMAQIEAFDPAKPKQEYKLMDMDTLM CCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCEEEEEECCCCCCCHHHEEEECHHHHH MALAKERGVKPSEIWMGGMQSYEKMGMKM HHHHHHHCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA