| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492101
Identifier: 116492101
GI number: 116492101
Start: 342914
End: 343252
Strand: Reverse
Name: 116492101
Synonym: PEPE_0297
Alternate gene names: NA
Gene position: 343252-342914 (Counterclockwise)
Preceding gene: 116492102
Following gene: 116492098
Centisome position: 18.73
GC content: 35.69
Gene sequence:
>339_bases ATGACTACAGAAAATAAAATCTTAAGTTCATTATCATATTTAAGTATCTTTTTTATGCCCATTCTCTTTCCCATCGTCGT ATTTGCCTTAACTTCTAACAGTAATCACCCTGAAGCTCATCGCAACTCCATTACTGCTTTTTGGCTTCATTTATTACCAA CAATTTTAGTTCCAGTGGCCTTCTTCTTAGGATTATTAGCAACTGGGCAAAGTTTTTCTACTGCTAATTTGAGTGGGTCT TCCCTAGTATTATTTGGAATCGTCGGTCTCATTGGATTATTGATTTTAGGAATGTTTATTTACAATCTATATCGCGGAGT AAAGGTCTGGGTGGACTAG
Upstream 100 bases:
>100_bases AAACTAAAGCTAGACAAGAAAACAAATAACTTAGATGCAAGAGCTGAGGCAATTTAATCAACCCCAATCTTGCATTTTTT ATACCCAAAGGAGATTTCAT
Downstream 100 bases:
>100_bases GATTATTGTCCTTCAAAAAAATTATATGTTTTTTTGACTTATTTGTTGCAAGCGCTTACAGAAGGTGTTAATATACTAAG TGAGGAAAGGAAAAGTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTTENKILSSLSYLSIFFMPILFPIVVFALTSNSNHPEAHRNSITAFWLHLLPTILVPVAFFLGLLATGQSFSTANLSGS SLVLFGIVGLIGLLILGMFIYNLYRGVKVWVD
Sequences:
>Translated_112_residues MTTENKILSSLSYLSIFFMPILFPIVVFALTSNSNHPEAHRNSITAFWLHLLPTILVPVAFFLGLLATGQSFSTANLSGS SLVLFGIVGLIGLLILGMFIYNLYRGVKVWVD >Mature_111_residues TTENKILSSLSYLSIFFMPILFPIVVFALTSNSNHPEAHRNSITAFWLHLLPTILVPVAFFLGLLATGQSFSTANLSGSS LVLFGIVGLIGLLILGMFIYNLYRGVKVWVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12320; Mature: 12189
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTENKILSSLSYLSIFFMPILFPIVVFALTSNSNHPEAHRNSITAFWLHLLPTILVPVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FFLGLLATGQSFSTANLSGSSLVLFGIVGLIGLLILGMFIYNLYRGVKVWVD HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTENKILSSLSYLSIFFMPILFPIVVFALTSNSNHPEAHRNSITAFWLHLLPTILVPVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FFLGLLATGQSFSTANLSGSSLVLFGIVGLIGLLILGMFIYNLYRGVKVWVD HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA