Click here to switch to the map view.

The map label for this gene is yidP [C]

Identifier: 116491989

GI number: 116491989

Start: 207256

End: 207993

Strand: Direct

Name: yidP [C]

Synonym: PEPE_0175

Alternate gene names: 116491989

Gene position: 207256-207993 (Clockwise)

Preceding gene: 116491988

Following gene: 116491990

Centisome position: 11.31

GC content: 29.4

Gene sequence:

>738_bases
ATGAAATTTAAGGAGCTTTCACCATCTACTTATGCAGAGGAATTTATTCGTTCAAAAATTTTGGTAGAAGAGGATGGGAC
AGCAATTAAATCTCAAAGAGAATTATCTGCTGATTTAGGGGTTAGTAGAAATGCAATTAAGTATGCATTGAAAAGACTTC
AGTATGATGGGGATATACGTATAAAAGAACGACAAGGTATAGAGATTAATAAGAAACGGGATATTAATCTTCTAAGTATG
GAACCAATGAGTAAGGAATTAAAACAAGCAGAAATGCATATTAAGCATATTTCTAGTGAAATAATCAAAACTCCAGATTC
ATTAGTTGATTTTTTTGGGAATGCAACCGAGTTAGCGGAAATAAAGAGAATTAGACTTGATGATAAAGATGTTGTATCTT
TTGAAATTTCTTATCTAGATAATCGAAAATTTGAAGATATAGCTAGCGTCAATTTTAATGAATGCTCATTATATCAAATT
TTGGAAAATAGATATGGAAAGCTACCAATATATGGGTATGAAAATATAACATGTGTCTTGGCGAATGAGAGCTTAGCAAC
TAAGTTAAATGTGAAAATAAATACGCCATTATATCAAGTAGATAGTTATAACTATTCTGATGATGATAAAGCAGTAGAAC
ATACAGCTCAATTTTTACCAGCTAATAAAATTAAATATCATTTTAAAGCAAAAAATATTTTTGATTATCAAGAGGATGAT
GACGATGACATTATTTAA

Upstream 100 bases:

>100_bases
ATAATATATATATCTTTTCTAAAAATGTTTTGTTGTTTTTTAGGGGTTGATAATAATATAAAGTATATGATTATAAAAAA
AAGGACCGAGGGGCGGTAAT

Downstream 100 bases:

>100_bases
AGATATATACAAAGATCTTGATAACAAAATAAAAATGGGACTCTATAAGAAGGGCAGCGCATTACCAAATGAAGGAGAAC
TTCAACTGATTTATGGAGTA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcription Regulator GntR Family

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKFKELSPSTYAEEFIRSKILVEEDGTAIKSQRELSADLGVSRNAIKYALKRLQYDGDIRIKERQGIEINKKRDINLLSM
EPMSKELKQAEMHIKHISSEIIKTPDSLVDFFGNATELAEIKRIRLDDKDVVSFEISYLDNRKFEDIASVNFNECSLYQI
LENRYGKLPIYGYENITCVLANESLATKLNVKINTPLYQVDSYNYSDDDKAVEHTAQFLPANKIKYHFKAKNIFDYQEDD
DDDII

Sequences:

>Translated_245_residues
MKFKELSPSTYAEEFIRSKILVEEDGTAIKSQRELSADLGVSRNAIKYALKRLQYDGDIRIKERQGIEINKKRDINLLSM
EPMSKELKQAEMHIKHISSEIIKTPDSLVDFFGNATELAEIKRIRLDDKDVVSFEISYLDNRKFEDIASVNFNECSLYQI
LENRYGKLPIYGYENITCVLANESLATKLNVKINTPLYQVDSYNYSDDDKAVEHTAQFLPANKIKYHFKAKNIFDYQEDD
DDDII
>Mature_245_residues
MKFKELSPSTYAEEFIRSKILVEEDGTAIKSQRELSADLGVSRNAIKYALKRLQYDGDIRIKERQGIEINKKRDINLLSM
EPMSKELKQAEMHIKHISSEIIKTPDSLVDFFGNATELAEIKRIRLDDKDVVSFEISYLDNRKFEDIASVNFNECSLYQI
LENRYGKLPIYGYENITCVLANESLATKLNVKINTPLYQVDSYNYSDDDKAVEHTAQFLPANKIKYHFKAKNIFDYQEDD
DDDII

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28415; Mature: 28415

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKELSPSTYAEEFIRSKILVEEDGTAIKSQRELSADLGVSRNAIKYALKRLQYDGDIR
CCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEE
IKERQGIEINKKRDINLLSMEPMSKELKQAEMHIKHISSEIIKTPDSLVDFFGNATELAE
EECCCCCEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHH
IKRIRLDDKDVVSFEISYLDNRKFEDIASVNFNECSLYQILENRYGKLPIYGYENITCVL
HHHHCCCCCCEEEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCEEEEE
ANESLATKLNVKINTPLYQVDSYNYSDDDKAVEHTAQFLPANKIKYHFKAKNIFDYQEDD
ECCCEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
DDDII
CCCCC
>Mature Secondary Structure
MKFKELSPSTYAEEFIRSKILVEEDGTAIKSQRELSADLGVSRNAIKYALKRLQYDGDIR
CCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEE
IKERQGIEINKKRDINLLSMEPMSKELKQAEMHIKHISSEIIKTPDSLVDFFGNATELAE
EECCCCCEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHH
IKRIRLDDKDVVSFEISYLDNRKFEDIASVNFNECSLYQILENRYGKLPIYGYENITCVL
HHHHCCCCCCEEEEEEEECCCCCCHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCEEEEE
ANESLATKLNVKINTPLYQVDSYNYSDDDKAVEHTAQFLPANKIKYHFKAKNIFDYQEDD
ECCCEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
DDDII
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA