| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116491982
Identifier: 116491982
GI number: 116491982
Start: 199708
End: 201627
Strand: Direct
Name: 116491982
Synonym: PEPE_0168
Alternate gene names: NA
Gene position: 199708-201627 (Clockwise)
Preceding gene: 116491981
Following gene: 116491983
Centisome position: 10.9
GC content: 40.57
Gene sequence:
>1920_bases TTGGCAAAAAATAAGGAGCAAAAAAGCGGTAAACATGTACCGTATGTCACTAAAAAGCAACGAGGTGGTAGTCCAGCCAT CTTAATCATGGGGATTATTTTAGCTATTATTTTTGGTGCATCAACGGCTTATTCAGGGATGAAAGCTGGATTAACGGTCG CCGCAGGAATTCCAGGTTCAATTATTGGATCAGGATTGGTTAGTATTTTTGCCAGAAAAAAAGGAATTTTAGGCAAAAAT ATACTGCAAGGCATGTCGAGCGGTGGTGAAGCCATTGCCAGTGGAATGATTTACGTTTTACCAGCCATTATTTTAATTGG CGGGCACGTTAATTTTTGGACCGGAATGATGGTGGGAATTTTAGCCGTGTTATTTGCCATTGGGAGTGCTTCGTTAGTAC AAAATTATCTGATTGTAGAAGAACATGGACGTCTAGCTTATCCCGAATCAATGGCAATTACGGAAGCGTTAGTGGCCTCA GAAAGTGGTGGCGATTCACTTAAATTCTTAGGAATTGGTTTCGGAATTGGTGGTTTGATTACCATGGTTACGACCCAAGT TTTCGGGTGGCTAAACAATATGATTACTTACACCGGAAATTCATTTTATCGTTGGAAAATGTCTACTGAAGTCAATCCGA TGTTAGCAGGAATCGGTTTTGTAGTTGGAATTGATGTAGCTTTAACGATGTTTGCGGGATCGATTCTTTCAAACTTTGCG GTAGTTCCGTTGGTAAGCTACTTTACCCAAATGGCTGGCGGAAGTGCTCACGTTTGGAATAATGCAGCTTTGCATATTTC ACAAATGGGTGTGGATGATGTCGCTGGATCGTACGTCAAGTATATTGGGGCTGGAATGATGCTTTGCGGAGGAATCATTG GAGCAATCAAGTTGATTCCCGTAATCTGGACTTCAATTAAAAAAGTAATCAACGCTCGCAATAGCGCTACGGAAGAAAAG AATGCCCTAGGTGTGATTGCATTGATGTTGTCGGTAATTTTAATTTTTGTCGCTGGTTTTATTATTTCAGGTTCATTTTT AGTTGCTCTTATTGGTGGAATTCTTTCACTATTATTAGCTTTATTATTTGTAATTGTTTCGGCCCGTTTAGCAGGAACCA TCGGGTGCTCGAACGCGCCGGTGTCAGGGATGACTATTGCTTCATTGGTAATTATGACTTTGGCCTTTGTATCAATGGGA TGGACAAATCAGAACTACAGTGAAATCTTATTGCTATTTGGGGTTTTCATTGTTACCGCAATCTCGGTTGGTGGGGGTTA TATGCAGACCCAAAAAGTTAACTATATGATTGGTGGTTCCAATCGTGAGATGATGAAATACTACATGATTGCCGGAATTG TGGGGGTATTTACGGTCGTAGGAACAACCGTGATCCTAGCTCCACAATTACAGGTGACCGGTTCTAACCCACCATTTGGA TTACCCCAAGCCAATTTGATTGCAACGCTAACAACGGGAATTATGTCGGGAAATTTACCATGGATTATGGTCATTGTCGG AATAGTAATGGCGATTGTTTTATGGATGCTAGATTTACCAATTATGACGGTGGCTTTAGGTTTCTACTTACCAATTTCGA CTACTTCGATCATTTTAGTGGGAGCGTTGCTTAAATTGATTGTAGATAAGACAACTAAGGGAGAAGCATTAAAAGCTAAA AGAATCCAAAGTGGTGTCAGTCTTTCTTCAGGTTTAATCGCTGGGGGCTCAATCATTGGTTTGATTGGTATTATTCTACA CGTGACTGGTTTGCTTAAAGATGTATCACCTAAAGGTTTTGCCGCCGGAAATGCGATGGGAATCATAATCTTAATTGTAT TAGCGGTTGCCATTGTTGTACCACTTTACATGATTAAAAAGGTAGAAGATCGGAAACCAAGTGATGAAAACGAGGGATGA
Upstream 100 bases:
>100_bases AGCGAGTTTCACAGATTATTGATCACTTCTTTACTCCTGTTGATACGCATAAAGGTGCCATTGGGTAATTAATATTTTGT GAGTGAAAGAGGGAATCAAA
Downstream 100 bases:
>100_bases GTATCAGTTAACAGATGATGAATTACGGGAGATTGTATTTGAAAAGAATCCACGAGTGGACTACGAACTAAAACAAGGAA TTATTACAATTATTAAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 639; Mature: 638
Protein sequence:
>639_residues MAKNKEQKSGKHVPYVTKKQRGGSPAILIMGIILAIIFGASTAYSGMKAGLTVAAGIPGSIIGSGLVSIFARKKGILGKN ILQGMSSGGEAIASGMIYVLPAIILIGGHVNFWTGMMVGILAVLFAIGSASLVQNYLIVEEHGRLAYPESMAITEALVAS ESGGDSLKFLGIGFGIGGLITMVTTQVFGWLNNMITYTGNSFYRWKMSTEVNPMLAGIGFVVGIDVALTMFAGSILSNFA VVPLVSYFTQMAGGSAHVWNNAALHISQMGVDDVAGSYVKYIGAGMMLCGGIIGAIKLIPVIWTSIKKVINARNSATEEK NALGVIALMLSVILIFVAGFIISGSFLVALIGGILSLLLALLFVIVSARLAGTIGCSNAPVSGMTIASLVIMTLAFVSMG WTNQNYSEILLLFGVFIVTAISVGGGYMQTQKVNYMIGGSNREMMKYYMIAGIVGVFTVVGTTVILAPQLQVTGSNPPFG LPQANLIATLTTGIMSGNLPWIMVIVGIVMAIVLWMLDLPIMTVALGFYLPISTTSIILVGALLKLIVDKTTKGEALKAK RIQSGVSLSSGLIAGGSIIGLIGIILHVTGLLKDVSPKGFAAGNAMGIIILIVLAVAIVVPLYMIKKVEDRKPSDENEG
Sequences:
>Translated_639_residues MAKNKEQKSGKHVPYVTKKQRGGSPAILIMGIILAIIFGASTAYSGMKAGLTVAAGIPGSIIGSGLVSIFARKKGILGKN ILQGMSSGGEAIASGMIYVLPAIILIGGHVNFWTGMMVGILAVLFAIGSASLVQNYLIVEEHGRLAYPESMAITEALVAS ESGGDSLKFLGIGFGIGGLITMVTTQVFGWLNNMITYTGNSFYRWKMSTEVNPMLAGIGFVVGIDVALTMFAGSILSNFA VVPLVSYFTQMAGGSAHVWNNAALHISQMGVDDVAGSYVKYIGAGMMLCGGIIGAIKLIPVIWTSIKKVINARNSATEEK NALGVIALMLSVILIFVAGFIISGSFLVALIGGILSLLLALLFVIVSARLAGTIGCSNAPVSGMTIASLVIMTLAFVSMG WTNQNYSEILLLFGVFIVTAISVGGGYMQTQKVNYMIGGSNREMMKYYMIAGIVGVFTVVGTTVILAPQLQVTGSNPPFG LPQANLIATLTTGIMSGNLPWIMVIVGIVMAIVLWMLDLPIMTVALGFYLPISTTSIILVGALLKLIVDKTTKGEALKAK RIQSGVSLSSGLIAGGSIIGLIGIILHVTGLLKDVSPKGFAAGNAMGIIILIVLAVAIVVPLYMIKKVEDRKPSDENEG >Mature_638_residues AKNKEQKSGKHVPYVTKKQRGGSPAILIMGIILAIIFGASTAYSGMKAGLTVAAGIPGSIIGSGLVSIFARKKGILGKNI LQGMSSGGEAIASGMIYVLPAIILIGGHVNFWTGMMVGILAVLFAIGSASLVQNYLIVEEHGRLAYPESMAITEALVASE SGGDSLKFLGIGFGIGGLITMVTTQVFGWLNNMITYTGNSFYRWKMSTEVNPMLAGIGFVVGIDVALTMFAGSILSNFAV VPLVSYFTQMAGGSAHVWNNAALHISQMGVDDVAGSYVKYIGAGMMLCGGIIGAIKLIPVIWTSIKKVINARNSATEEKN ALGVIALMLSVILIFVAGFIISGSFLVALIGGILSLLLALLFVIVSARLAGTIGCSNAPVSGMTIASLVIMTLAFVSMGW TNQNYSEILLLFGVFIVTAISVGGGYMQTQKVNYMIGGSNREMMKYYMIAGIVGVFTVVGTTVILAPQLQVTGSNPPFGL PQANLIATLTTGIMSGNLPWIMVIVGIVMAIVLWMLDLPIMTVALGFYLPISTTSIILVGALLKLIVDKTTKGEALKAKR IQSGVSLSSGLIAGGSIIGLIGIILHVTGLLKDVSPKGFAAGNAMGIIILIVLAVAIVVPLYMIKKVEDRKPSDENEG
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oligopeptide OPT transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004814 - InterPro: IPR004813 [H]
Pfam domain/function: PF03169 OPT [H]
EC number: NA
Molecular weight: Translated: 66716; Mature: 66585
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNKEQKSGKHVPYVTKKQRGGSPAILIMGIILAIIFGASTAYSGMKAGLTVAAGIPGS CCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHCCEEEECCCCHH IIGSGLVSIFARKKGILGKNILQGMSSGGEAIASGMIYVLPAIILIGGHVNFWTGMMVGI HHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAVLFAIGSASLVQNYLIVEEHGRLAYPESMAITEALVASESGGDSLKFLGIGFGIGGLI HHHHHHHCCHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHH TMVTTQVFGWLNNMITYTGNSFYRWKMSTEVNPMLAGIGFVVGIDVALTMFAGSILSNFA HHHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVPLVSYFTQMAGGSAHVWNNAALHISQMGVDDVAGSYVKYIGAGMMLCGGIIGAIKLIP HHHHHHHHHHHCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIWTSIKKVINARNSATEEKNALGVIALMLSVILIFVAGFIISGSFLVALIGGILSLLLA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFVIVSARLAGTIGCSNAPVSGMTIASLVIMTLAFVSMGWTNQNYSEILLLFGVFIVTA HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH ISVGGGYMQTQKVNYMIGGSNREMMKYYMIAGIVGVFTVVGTTVILAPQLQVTGSNPPFG HHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCC LPQANLIATLTTGIMSGNLPWIMVIVGIVMAIVLWMLDLPIMTVALGFYLPISTTSIILV CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GALLKLIVDKTTKGEALKAKRIQSGVSLSSGLIAGGSIIGLIGIILHVTGLLKDVSPKGF HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC AAGNAMGIIILIVLAVAIVVPLYMIKKVEDRKPSDENEG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AKNKEQKSGKHVPYVTKKQRGGSPAILIMGIILAIIFGASTAYSGMKAGLTVAAGIPGS CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHCCEEEECCCCHH IIGSGLVSIFARKKGILGKNILQGMSSGGEAIASGMIYVLPAIILIGGHVNFWTGMMVGI HHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAVLFAIGSASLVQNYLIVEEHGRLAYPESMAITEALVASESGGDSLKFLGIGFGIGGLI HHHHHHHCCHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHH TMVTTQVFGWLNNMITYTGNSFYRWKMSTEVNPMLAGIGFVVGIDVALTMFAGSILSNFA HHHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVPLVSYFTQMAGGSAHVWNNAALHISQMGVDDVAGSYVKYIGAGMMLCGGIIGAIKLIP HHHHHHHHHHHCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIWTSIKKVINARNSATEEKNALGVIALMLSVILIFVAGFIISGSFLVALIGGILSLLLA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFVIVSARLAGTIGCSNAPVSGMTIASLVIMTLAFVSMGWTNQNYSEILLLFGVFIVTA HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH ISVGGGYMQTQKVNYMIGGSNREMMKYYMIAGIVGVFTVVGTTVILAPQLQVTGSNPPFG HHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCC LPQANLIATLTTGIMSGNLPWIMVIVGIVMAIVLWMLDLPIMTVALGFYLPISTTSIILV CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GALLKLIVDKTTKGEALKAKRIQSGVSLSSGLIAGGSIIGLIGIILHVTGLLKDVSPKGF HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC AAGNAMGIIILIVLAVAIVVPLYMIKKVEDRKPSDENEG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]