Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116491982

Identifier: 116491982

GI number: 116491982

Start: 199708

End: 201627

Strand: Direct

Name: 116491982

Synonym: PEPE_0168

Alternate gene names: NA

Gene position: 199708-201627 (Clockwise)

Preceding gene: 116491981

Following gene: 116491983

Centisome position: 10.9

GC content: 40.57

Gene sequence:

>1920_bases
TTGGCAAAAAATAAGGAGCAAAAAAGCGGTAAACATGTACCGTATGTCACTAAAAAGCAACGAGGTGGTAGTCCAGCCAT
CTTAATCATGGGGATTATTTTAGCTATTATTTTTGGTGCATCAACGGCTTATTCAGGGATGAAAGCTGGATTAACGGTCG
CCGCAGGAATTCCAGGTTCAATTATTGGATCAGGATTGGTTAGTATTTTTGCCAGAAAAAAAGGAATTTTAGGCAAAAAT
ATACTGCAAGGCATGTCGAGCGGTGGTGAAGCCATTGCCAGTGGAATGATTTACGTTTTACCAGCCATTATTTTAATTGG
CGGGCACGTTAATTTTTGGACCGGAATGATGGTGGGAATTTTAGCCGTGTTATTTGCCATTGGGAGTGCTTCGTTAGTAC
AAAATTATCTGATTGTAGAAGAACATGGACGTCTAGCTTATCCCGAATCAATGGCAATTACGGAAGCGTTAGTGGCCTCA
GAAAGTGGTGGCGATTCACTTAAATTCTTAGGAATTGGTTTCGGAATTGGTGGTTTGATTACCATGGTTACGACCCAAGT
TTTCGGGTGGCTAAACAATATGATTACTTACACCGGAAATTCATTTTATCGTTGGAAAATGTCTACTGAAGTCAATCCGA
TGTTAGCAGGAATCGGTTTTGTAGTTGGAATTGATGTAGCTTTAACGATGTTTGCGGGATCGATTCTTTCAAACTTTGCG
GTAGTTCCGTTGGTAAGCTACTTTACCCAAATGGCTGGCGGAAGTGCTCACGTTTGGAATAATGCAGCTTTGCATATTTC
ACAAATGGGTGTGGATGATGTCGCTGGATCGTACGTCAAGTATATTGGGGCTGGAATGATGCTTTGCGGAGGAATCATTG
GAGCAATCAAGTTGATTCCCGTAATCTGGACTTCAATTAAAAAAGTAATCAACGCTCGCAATAGCGCTACGGAAGAAAAG
AATGCCCTAGGTGTGATTGCATTGATGTTGTCGGTAATTTTAATTTTTGTCGCTGGTTTTATTATTTCAGGTTCATTTTT
AGTTGCTCTTATTGGTGGAATTCTTTCACTATTATTAGCTTTATTATTTGTAATTGTTTCGGCCCGTTTAGCAGGAACCA
TCGGGTGCTCGAACGCGCCGGTGTCAGGGATGACTATTGCTTCATTGGTAATTATGACTTTGGCCTTTGTATCAATGGGA
TGGACAAATCAGAACTACAGTGAAATCTTATTGCTATTTGGGGTTTTCATTGTTACCGCAATCTCGGTTGGTGGGGGTTA
TATGCAGACCCAAAAAGTTAACTATATGATTGGTGGTTCCAATCGTGAGATGATGAAATACTACATGATTGCCGGAATTG
TGGGGGTATTTACGGTCGTAGGAACAACCGTGATCCTAGCTCCACAATTACAGGTGACCGGTTCTAACCCACCATTTGGA
TTACCCCAAGCCAATTTGATTGCAACGCTAACAACGGGAATTATGTCGGGAAATTTACCATGGATTATGGTCATTGTCGG
AATAGTAATGGCGATTGTTTTATGGATGCTAGATTTACCAATTATGACGGTGGCTTTAGGTTTCTACTTACCAATTTCGA
CTACTTCGATCATTTTAGTGGGAGCGTTGCTTAAATTGATTGTAGATAAGACAACTAAGGGAGAAGCATTAAAAGCTAAA
AGAATCCAAAGTGGTGTCAGTCTTTCTTCAGGTTTAATCGCTGGGGGCTCAATCATTGGTTTGATTGGTATTATTCTACA
CGTGACTGGTTTGCTTAAAGATGTATCACCTAAAGGTTTTGCCGCCGGAAATGCGATGGGAATCATAATCTTAATTGTAT
TAGCGGTTGCCATTGTTGTACCACTTTACATGATTAAAAAGGTAGAAGATCGGAAACCAAGTGATGAAAACGAGGGATGA

Upstream 100 bases:

>100_bases
AGCGAGTTTCACAGATTATTGATCACTTCTTTACTCCTGTTGATACGCATAAAGGTGCCATTGGGTAATTAATATTTTGT
GAGTGAAAGAGGGAATCAAA

Downstream 100 bases:

>100_bases
GTATCAGTTAACAGATGATGAATTACGGGAGATTGTATTTGAAAAGAATCCACGAGTGGACTACGAACTAAAACAAGGAA
TTATTACAATTATTAAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 638

Protein sequence:

>639_residues
MAKNKEQKSGKHVPYVTKKQRGGSPAILIMGIILAIIFGASTAYSGMKAGLTVAAGIPGSIIGSGLVSIFARKKGILGKN
ILQGMSSGGEAIASGMIYVLPAIILIGGHVNFWTGMMVGILAVLFAIGSASLVQNYLIVEEHGRLAYPESMAITEALVAS
ESGGDSLKFLGIGFGIGGLITMVTTQVFGWLNNMITYTGNSFYRWKMSTEVNPMLAGIGFVVGIDVALTMFAGSILSNFA
VVPLVSYFTQMAGGSAHVWNNAALHISQMGVDDVAGSYVKYIGAGMMLCGGIIGAIKLIPVIWTSIKKVINARNSATEEK
NALGVIALMLSVILIFVAGFIISGSFLVALIGGILSLLLALLFVIVSARLAGTIGCSNAPVSGMTIASLVIMTLAFVSMG
WTNQNYSEILLLFGVFIVTAISVGGGYMQTQKVNYMIGGSNREMMKYYMIAGIVGVFTVVGTTVILAPQLQVTGSNPPFG
LPQANLIATLTTGIMSGNLPWIMVIVGIVMAIVLWMLDLPIMTVALGFYLPISTTSIILVGALLKLIVDKTTKGEALKAK
RIQSGVSLSSGLIAGGSIIGLIGIILHVTGLLKDVSPKGFAAGNAMGIIILIVLAVAIVVPLYMIKKVEDRKPSDENEG

Sequences:

>Translated_639_residues
MAKNKEQKSGKHVPYVTKKQRGGSPAILIMGIILAIIFGASTAYSGMKAGLTVAAGIPGSIIGSGLVSIFARKKGILGKN
ILQGMSSGGEAIASGMIYVLPAIILIGGHVNFWTGMMVGILAVLFAIGSASLVQNYLIVEEHGRLAYPESMAITEALVAS
ESGGDSLKFLGIGFGIGGLITMVTTQVFGWLNNMITYTGNSFYRWKMSTEVNPMLAGIGFVVGIDVALTMFAGSILSNFA
VVPLVSYFTQMAGGSAHVWNNAALHISQMGVDDVAGSYVKYIGAGMMLCGGIIGAIKLIPVIWTSIKKVINARNSATEEK
NALGVIALMLSVILIFVAGFIISGSFLVALIGGILSLLLALLFVIVSARLAGTIGCSNAPVSGMTIASLVIMTLAFVSMG
WTNQNYSEILLLFGVFIVTAISVGGGYMQTQKVNYMIGGSNREMMKYYMIAGIVGVFTVVGTTVILAPQLQVTGSNPPFG
LPQANLIATLTTGIMSGNLPWIMVIVGIVMAIVLWMLDLPIMTVALGFYLPISTTSIILVGALLKLIVDKTTKGEALKAK
RIQSGVSLSSGLIAGGSIIGLIGIILHVTGLLKDVSPKGFAAGNAMGIIILIVLAVAIVVPLYMIKKVEDRKPSDENEG
>Mature_638_residues
AKNKEQKSGKHVPYVTKKQRGGSPAILIMGIILAIIFGASTAYSGMKAGLTVAAGIPGSIIGSGLVSIFARKKGILGKNI
LQGMSSGGEAIASGMIYVLPAIILIGGHVNFWTGMMVGILAVLFAIGSASLVQNYLIVEEHGRLAYPESMAITEALVASE
SGGDSLKFLGIGFGIGGLITMVTTQVFGWLNNMITYTGNSFYRWKMSTEVNPMLAGIGFVVGIDVALTMFAGSILSNFAV
VPLVSYFTQMAGGSAHVWNNAALHISQMGVDDVAGSYVKYIGAGMMLCGGIIGAIKLIPVIWTSIKKVINARNSATEEKN
ALGVIALMLSVILIFVAGFIISGSFLVALIGGILSLLLALLFVIVSARLAGTIGCSNAPVSGMTIASLVIMTLAFVSMGW
TNQNYSEILLLFGVFIVTAISVGGGYMQTQKVNYMIGGSNREMMKYYMIAGIVGVFTVVGTTVILAPQLQVTGSNPPFGL
PQANLIATLTTGIMSGNLPWIMVIVGIVMAIVLWMLDLPIMTVALGFYLPISTTSIILVGALLKLIVDKTTKGEALKAKR
IQSGVSLSSGLIAGGSIIGLIGIILHVTGLLKDVSPKGFAAGNAMGIIILIVLAVAIVVPLYMIKKVEDRKPSDENEG

Specific function: Unknown

COG id: COG1297

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oligopeptide OPT transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004814
- InterPro:   IPR004813 [H]

Pfam domain/function: PF03169 OPT [H]

EC number: NA

Molecular weight: Translated: 66716; Mature: 66585

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNKEQKSGKHVPYVTKKQRGGSPAILIMGIILAIIFGASTAYSGMKAGLTVAAGIPGS
CCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHCCEEEECCCCHH
IIGSGLVSIFARKKGILGKNILQGMSSGGEAIASGMIYVLPAIILIGGHVNFWTGMMVGI
HHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LAVLFAIGSASLVQNYLIVEEHGRLAYPESMAITEALVASESGGDSLKFLGIGFGIGGLI
HHHHHHHCCHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHH
TMVTTQVFGWLNNMITYTGNSFYRWKMSTEVNPMLAGIGFVVGIDVALTMFAGSILSNFA
HHHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVPLVSYFTQMAGGSAHVWNNAALHISQMGVDDVAGSYVKYIGAGMMLCGGIIGAIKLIP
HHHHHHHHHHHCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIWTSIKKVINARNSATEEKNALGVIALMLSVILIFVAGFIISGSFLVALIGGILSLLLA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFVIVSARLAGTIGCSNAPVSGMTIASLVIMTLAFVSMGWTNQNYSEILLLFGVFIVTA
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ISVGGGYMQTQKVNYMIGGSNREMMKYYMIAGIVGVFTVVGTTVILAPQLQVTGSNPPFG
HHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCC
LPQANLIATLTTGIMSGNLPWIMVIVGIVMAIVLWMLDLPIMTVALGFYLPISTTSIILV
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GALLKLIVDKTTKGEALKAKRIQSGVSLSSGLIAGGSIIGLIGIILHVTGLLKDVSPKGF
HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
AAGNAMGIIILIVLAVAIVVPLYMIKKVEDRKPSDENEG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AKNKEQKSGKHVPYVTKKQRGGSPAILIMGIILAIIFGASTAYSGMKAGLTVAAGIPGS
CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHCCEEEECCCCHH
IIGSGLVSIFARKKGILGKNILQGMSSGGEAIASGMIYVLPAIILIGGHVNFWTGMMVGI
HHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LAVLFAIGSASLVQNYLIVEEHGRLAYPESMAITEALVASESGGDSLKFLGIGFGIGGLI
HHHHHHHCCHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHH
TMVTTQVFGWLNNMITYTGNSFYRWKMSTEVNPMLAGIGFVVGIDVALTMFAGSILSNFA
HHHHHHHHHHHHHHEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVPLVSYFTQMAGGSAHVWNNAALHISQMGVDDVAGSYVKYIGAGMMLCGGIIGAIKLIP
HHHHHHHHHHHCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIWTSIKKVINARNSATEEKNALGVIALMLSVILIFVAGFIISGSFLVALIGGILSLLLA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFVIVSARLAGTIGCSNAPVSGMTIASLVIMTLAFVSMGWTNQNYSEILLLFGVFIVTA
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ISVGGGYMQTQKVNYMIGGSNREMMKYYMIAGIVGVFTVVGTTVILAPQLQVTGSNPPFG
HHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCCCCC
LPQANLIATLTTGIMSGNLPWIMVIVGIVMAIVLWMLDLPIMTVALGFYLPISTTSIILV
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GALLKLIVDKTTKGEALKAKRIQSGVSLSSGLIAGGSIIGLIGIILHVTGLLKDVSPKGF
HHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
AAGNAMGIIILIVLAVAIVVPLYMIKKVEDRKPSDENEG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]