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The map label for this gene is xylB [H]

Identifier: 116491977

GI number: 116491977

Start: 193498

End: 195093

Strand: Direct

Name: xylB [H]

Synonym: PEPE_0163

Alternate gene names: 116491977

Gene position: 193498-195093 (Clockwise)

Preceding gene: 116491976

Following gene: 116491978

Centisome position: 10.56

GC content: 40.54

Gene sequence:

>1596_bases
ATGAATTTAGTTGAAATATCAAAAGAAATTGAAAATGGCAATGTATCACTTGGTATTGAACTTGGTTCAACCCGAATCAA
GGCCGTTTTAATCACCAGTGACTACAAGACAATTGCTTCAGGAAGTTTTGTCTGGGAAAACCAGTTTAAGGATCAAATCT
GGACGTATTCATTGGATACAGTTTGGCAAGGAATTCAAGCTAGTTATTCGCAGATGGCTGCTGAAGTGCACAGTAAATAT
CATCAATCATTAACTTCCATTAAATCAATCGGAATTAGTGCAATGATGCATGGTTATCTAGCATTTTCGAAAAATAATGA
TTTGTTAGTGCCATTCCGCACTTGGCGGAACAACATCACGGAAGAATCTGCTGCAAAATTGACAGAAGCATTTAGTTTCA
ATATTCCACAACGCTGGACGATTGCACATCTCTACCAAGCAATTCTAAATGGCGAAGAACATGTTAAGGATATTGATTTC
GTAACGACCCTTGCTGGTTATGTGCACTGGAAATTATCTGGTGAAAAAGTATTGGGTGTGGGTGATGCCTCGGGAGTCTT
CCCTATCGATGAAAAGACAGGTTATTATTCAAAATCAATGCTGAAAACGTTTGCTGAACTAGAAAATGTTAAGCAGTTTG
ATTGGGATATCAACCAAGTCCTCCCAGATGTGAAGAGCGCTGGTGAAAAAGCCGGTGAATTAACTGCCGAGGGTGCTAAT
TTACTTGATGTAACTGGTAAGCTTCAAGCGGGTAGTGTAATGGCTCCCCCAGAAGGTGACGCAGGAACCGGAATGGTGGG
TACTAATAGTGTTCGCAAACGAACTGGTAACATCTCGGTCGGGACATCAGCCTTTTCAATGGTGGTTCTAGAAAAGCCTT
TGAAATCCGTTCATCGTGATATCGACGTTGTAATGACTCCCGATGGAGCCCCAGTTGCTATGGTTCATGTTAATAACTGT
TCATCAGATATCAATGCTTGGGCCCAAATCTTTAGTGATTTTGCAGCAAGATTAGGAATTAACCTAGCACCAGATAAGCT
CTATGAAGCACTCTTCTTAGAAGCAACTAAAGCTGATCGTGATTTGGGACATTTGATTAATTATAGTTATCAATCTGGTG
AAAATATTACAAATATCAAAGCAGGACGACCATTATTTGTTCGTAAGTCGGATAGTAATTTCAACCTACCAAACTTTATG
CAAACTCAACTTTATTCTGCGTTTGCACCACTAAAAATTGGTATGGATATCCTTAGCAATGAAGAAGATATCAAGACGGA
TGTCATGATTGCTCAAGGTGGATTATTCCGTACTCCAGTAGTTGCTCAACAAGTTTTATCGGATGCGCTTAATATTCCGA
TTACTGTAATGGCTAACGCTGGCGAAGGTGGACCATGGGGAATGGCAGTCCTAGCAATGTTTGCTAGCGACAGTAATGGC
CAAAGCTTAAGTGATTATCTAGACACCAACGTCTTTAGTAATCCTGAAAGTATGACCTTGAGCCCCGAACCAGAGGGCGT
TGAAGCATATGACGAATTCACTAAGGAATATGTAGCAGGCTTACCAGTTGAAGCTCAAGCTGGAGAAGTAATTTAG

Upstream 100 bases:

>100_bases
TTCTATTTATCAGAACACGTGTACCTGAAACAAAGGGTCACACACTAGAAGAAATTGAAGAACAAGGACTTGGAAAATAA
ATTAGTTTGGAGATTTTAAA

Downstream 100 bases:

>100_bases
GAGGGATAAGGTTAATGTTAGAGAAGTTAAAACAGGAAGTTTACGAAGCAAACATGCAACTTCCTAAATTAGATTTAGTT
ACCTTTACTTGGGGTAACGT

Product: L-ribulokinase (putative)

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MNLVEISKEIENGNVSLGIELGSTRIKAVLITSDYKTIASGSFVWENQFKDQIWTYSLDTVWQGIQASYSQMAAEVHSKY
HQSLTSIKSIGISAMMHGYLAFSKNNDLLVPFRTWRNNITEESAAKLTEAFSFNIPQRWTIAHLYQAILNGEEHVKDIDF
VTTLAGYVHWKLSGEKVLGVGDASGVFPIDEKTGYYSKSMLKTFAELENVKQFDWDINQVLPDVKSAGEKAGELTAEGAN
LLDVTGKLQAGSVMAPPEGDAGTGMVGTNSVRKRTGNISVGTSAFSMVVLEKPLKSVHRDIDVVMTPDGAPVAMVHVNNC
SSDINAWAQIFSDFAARLGINLAPDKLYEALFLEATKADRDLGHLINYSYQSGENITNIKAGRPLFVRKSDSNFNLPNFM
QTQLYSAFAPLKIGMDILSNEEDIKTDVMIAQGGLFRTPVVAQQVLSDALNIPITVMANAGEGGPWGMAVLAMFASDSNG
QSLSDYLDTNVFSNPESMTLSPEPEGVEAYDEFTKEYVAGLPVEAQAGEVI

Sequences:

>Translated_531_residues
MNLVEISKEIENGNVSLGIELGSTRIKAVLITSDYKTIASGSFVWENQFKDQIWTYSLDTVWQGIQASYSQMAAEVHSKY
HQSLTSIKSIGISAMMHGYLAFSKNNDLLVPFRTWRNNITEESAAKLTEAFSFNIPQRWTIAHLYQAILNGEEHVKDIDF
VTTLAGYVHWKLSGEKVLGVGDASGVFPIDEKTGYYSKSMLKTFAELENVKQFDWDINQVLPDVKSAGEKAGELTAEGAN
LLDVTGKLQAGSVMAPPEGDAGTGMVGTNSVRKRTGNISVGTSAFSMVVLEKPLKSVHRDIDVVMTPDGAPVAMVHVNNC
SSDINAWAQIFSDFAARLGINLAPDKLYEALFLEATKADRDLGHLINYSYQSGENITNIKAGRPLFVRKSDSNFNLPNFM
QTQLYSAFAPLKIGMDILSNEEDIKTDVMIAQGGLFRTPVVAQQVLSDALNIPITVMANAGEGGPWGMAVLAMFASDSNG
QSLSDYLDTNVFSNPESMTLSPEPEGVEAYDEFTKEYVAGLPVEAQAGEVI
>Mature_531_residues
MNLVEISKEIENGNVSLGIELGSTRIKAVLITSDYKTIASGSFVWENQFKDQIWTYSLDTVWQGIQASYSQMAAEVHSKY
HQSLTSIKSIGISAMMHGYLAFSKNNDLLVPFRTWRNNITEESAAKLTEAFSFNIPQRWTIAHLYQAILNGEEHVKDIDF
VTTLAGYVHWKLSGEKVLGVGDASGVFPIDEKTGYYSKSMLKTFAELENVKQFDWDINQVLPDVKSAGEKAGELTAEGAN
LLDVTGKLQAGSVMAPPEGDAGTGMVGTNSVRKRTGNISVGTSAFSMVVLEKPLKSVHRDIDVVMTPDGAPVAMVHVNNC
SSDINAWAQIFSDFAARLGINLAPDKLYEALFLEATKADRDLGHLINYSYQSGENITNIKAGRPLFVRKSDSNFNLPNFM
QTQLYSAFAPLKIGMDILSNEEDIKTDVMIAQGGLFRTPVVAQQVLSDALNIPITVMANAGEGGPWGMAVLAMFASDSNG
QSLSDYLDTNVFSNPESMTLSPEPEGVEAYDEFTKEYVAGLPVEAQAGEVI

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 57939; Mature: 57939

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLVEISKEIENGNVSLGIELGSTRIKAVLITSDYKTIASGSFVWENQFKDQIWTYSLDT
CCHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCHHHHCCCEEECCCCCCHHEEEEHHH
VWQGIQASYSQMAAEVHSKYHQSLTSIKSIGISAMMHGYLAFSKNNDLLVPFRTWRNNIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHCCCCC
EESAAKLTEAFSFNIPQRWTIAHLYQAILNGEEHVKDIDFVTTLAGYVHWKLSGEKVLGV
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCEEEEE
GDASGVFPIDEKTGYYSKSMLKTFAELENVKQFDWDINQVLPDVKSAGEKAGELTAEGAN
CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCC
LLDVTGKLQAGSVMAPPEGDAGTGMVGTNSVRKRTGNISVGTSAFSMVVLEKPLKSVHRD
EEEECCCCCCCCEECCCCCCCCCCCCCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHCCC
IDVVMTPDGAPVAMVHVNNCSSDINAWAQIFSDFAARLGINLAPDKLYEALFLEATKADR
CEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCH
DLGHLINYSYQSGENITNIKAGRPLFVRKSDSNFNLPNFMQTQLYSAFAPLKIGMDILSN
HHHHHHCCCCCCCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHCC
EEDIKTDVMIAQGGLFRTPVVAQQVLSDALNIPITVMANAGEGGPWGMAVLAMFASDSNG
CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC
QSLSDYLDTNVFSNPESMTLSPEPEGVEAYDEFTKEYVAGLPVEAQAGEVI
CHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNLVEISKEIENGNVSLGIELGSTRIKAVLITSDYKTIASGSFVWENQFKDQIWTYSLDT
CCHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCHHHHCCCEEECCCCCCHHEEEEHHH
VWQGIQASYSQMAAEVHSKYHQSLTSIKSIGISAMMHGYLAFSKNNDLLVPFRTWRNNIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEHHHCCCCC
EESAAKLTEAFSFNIPQRWTIAHLYQAILNGEEHVKDIDFVTTLAGYVHWKLSGEKVLGV
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCEEEEE
GDASGVFPIDEKTGYYSKSMLKTFAELENVKQFDWDINQVLPDVKSAGEKAGELTAEGAN
CCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCC
LLDVTGKLQAGSVMAPPEGDAGTGMVGTNSVRKRTGNISVGTSAFSMVVLEKPLKSVHRD
EEEECCCCCCCCEECCCCCCCCCCCCCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHCCC
IDVVMTPDGAPVAMVHVNNCSSDINAWAQIFSDFAARLGINLAPDKLYEALFLEATKADR
CEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCH
DLGHLINYSYQSGENITNIKAGRPLFVRKSDSNFNLPNFMQTQLYSAFAPLKIGMDILSN
HHHHHHCCCCCCCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHCC
EEDIKTDVMIAQGGLFRTPVVAQQVLSDALNIPITVMANAGEGGPWGMAVLAMFASDSNG
CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC
QSLSDYLDTNVFSNPESMTLSPEPEGVEAYDEFTKEYVAGLPVEAQAGEVI
CHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]