| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is fruA [H]
Identifier: 116491956
GI number: 116491956
Start: 167981
End: 169870
Strand: Direct
Name: fruA [H]
Synonym: PEPE_0142
Alternate gene names: 116491956
Gene position: 167981-169870 (Clockwise)
Preceding gene: 116491955
Following gene: 116491957
Centisome position: 9.17
GC content: 36.08
Gene sequence:
>1890_bases ATGACAAAATATACAATTATTGCAGCTACTGGCTGTCCAACTGGAATTGCCCACACCTATATGGCCCAAGAAGCGTTAGA AGAGGCCGCCAAGAAACGAGGAGTTTCAATTAAAGTAGAAACACATGGACAAAGCGGTACAGAAAATCAATTTACGCCTG AAGAAATTAGCAACGCTAAAGGAGTCATTATAGCAGCTGATAAAGACGTTGATATTGAAAGATTTGATGGAAAAAGATTA ATTAATGTTTCAGTAACTAAAGGAATGAAAGAACCGGATGAATTAGTTAGTAAGATATTGGACGATGATGTGCCGATATA CCACAGTAATGGCCAATATAATAAAGAAGATCAAATCAGTACAACTAATGGAACTTTCTGGCACAGTATCTATGTAGACT TAATGAACGGTGTTTCGCATATGCTTCCTTTGGTTGTTGCTGGAGGGGTATTAACAGCTATTTCCTTTTTCTGGGGTATC AATTCTGCCGACCCGAATAGCGCTCAATTTAATTCATTTGCTCAACTGCTAAATACGATTGGCGGATTTGCAATGAATTT GATGGTACCCGTTTTATGTGCCTATATTGCTGAAGCAATTGGAAAAAGATCTGGTTTAGTAGTTGGTTTTGCAACGGGAA TGATTGCTTATACCAATGGTACTGGATTCTTAGGAGGAATTGTCGGAGGATTTCTTGCAGGATACACAGTGGTTTTATTA CAGCATTTATTTAAAAAATTGCCTAAATCTTTAGATGGTTTAAAACAAATTTTTCTATTTCCGGTTATTGGAGTTTTTAT TTCCGGTGCGATTATGTGGTATATGTCGGTACCGATGAAAGATATTAATACCGGCATGATGGCGTTTTTAAAAGGAATGG AAAATTCTAGTCCATTAGTTTTGGGATTAATTATTGGAATTATGTGTGCTTCTGATATGGGTGGTCCAATCAATAAAGCT GCATACCTAACTGGTACAGCTTTGCTTGCACAAGGAAATTACTTTTTCATGGCTGGAGTATCTGCAGCCTGCATAGCTCC GCCATTAGCTACAGGCTTTTCAGTACTTTTTAACCGTAAAGCATACTCTGAAAATGAGCGAAGTGCTGGTTATGTTAACT TCTTATTAGGATCAACGCATATTACAGAAGGAGCAATACCTTTTGCGGCTAAAAATCCGTTAATTAATATTCCAATTTTT ATGGTTGGATCTTCCATCGCAGCAATTTTAACTTATACAACTAGAATTAGCGTTCCAGCACCACATGGTGGTTTTATCGT TCTACCTTTGGTTAATAAACCATTTTTATGGGTTTTGTTTATTGTAATTGGAGCAATTGTTTCGGGGCTATTACTTTCAT TAGCTGATGGTCATAAAGCTCACGTTGGAGAAAAAACATTAGAAGATAAAAGAGAAGTATCAAATGAGCGTAAAGTGAAT GACGAAAGTTTAGATAGTATCCTCACTGTAGATAATATTAAAGTTAATGTTGATGTTGAATCTAGAGATGAACTATTACG GTATCTATCAAACTTATCTGTAAGTAACGGATATAGTTCAGATGCAAATGCGGTATACAATAAATATTTAGCACGTGAGT CAGCAGGATCTACCGGGATGGAAAAAGGCATCGCTATTCCACATGCTCAAGATAATACAATTAATACGTCTGCAATGTTA GTGCTGAAATTAAAACAACCGATTGAATGGAAAACTTTTGATAACCAACCCGTTGATACGGTAATTTCGTTTTTAATTCC TGAACGTGACCAAGGTAATCATTTACGATATCTTTCATCGGTTTCTAAGTTACTAATGCATGAAAGTTTTGTTCAAGAAC TAAAAAATGCTAAATCGGTCGAAGAAATAGCGGCACTATTCAAAAAATAA
Upstream 100 bases:
>100_bases CTGGAAGCTCAACTGCATTTAAAGCAGGATTAACTGATTTTTCAGACGTTGAGGAGTTAAACGAGCAAATTAAGATTGAA ACTGTTAGGAGGGATAGTAA
Downstream 100 bases:
>100_bases AAATTAAGGCTACTTCAGTTTAAAATGAAAGCGTTTGACAAAGTGGTACCAACCAGTTAAAATAGGTTTTGTTGAATGAT ACCAACCAGTACAGATGAGA
Product: phosphotransferase system fructose-specific component IIB
Products: NA
Alternate protein names: EIIABC-Fru; Fructose-specific phosphotransferase enzyme IIA component; EII-Fru; PTS system fructose-specific EIIA component; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 629; Mature: 628
Protein sequence:
>629_residues MTKYTIIAATGCPTGIAHTYMAQEALEEAAKKRGVSIKVETHGQSGTENQFTPEEISNAKGVIIAADKDVDIERFDGKRL INVSVTKGMKEPDELVSKILDDDVPIYHSNGQYNKEDQISTTNGTFWHSIYVDLMNGVSHMLPLVVAGGVLTAISFFWGI NSADPNSAQFNSFAQLLNTIGGFAMNLMVPVLCAYIAEAIGKRSGLVVGFATGMIAYTNGTGFLGGIVGGFLAGYTVVLL QHLFKKLPKSLDGLKQIFLFPVIGVFISGAIMWYMSVPMKDINTGMMAFLKGMENSSPLVLGLIIGIMCASDMGGPINKA AYLTGTALLAQGNYFFMAGVSAACIAPPLATGFSVLFNRKAYSENERSAGYVNFLLGSTHITEGAIPFAAKNPLINIPIF MVGSSIAAILTYTTRISVPAPHGGFIVLPLVNKPFLWVLFIVIGAIVSGLLLSLADGHKAHVGEKTLEDKREVSNERKVN DESLDSILTVDNIKVNVDVESRDELLRYLSNLSVSNGYSSDANAVYNKYLARESAGSTGMEKGIAIPHAQDNTINTSAML VLKLKQPIEWKTFDNQPVDTVISFLIPERDQGNHLRYLSSVSKLLMHESFVQELKNAKSVEEIAALFKK
Sequences:
>Translated_629_residues MTKYTIIAATGCPTGIAHTYMAQEALEEAAKKRGVSIKVETHGQSGTENQFTPEEISNAKGVIIAADKDVDIERFDGKRL INVSVTKGMKEPDELVSKILDDDVPIYHSNGQYNKEDQISTTNGTFWHSIYVDLMNGVSHMLPLVVAGGVLTAISFFWGI NSADPNSAQFNSFAQLLNTIGGFAMNLMVPVLCAYIAEAIGKRSGLVVGFATGMIAYTNGTGFLGGIVGGFLAGYTVVLL QHLFKKLPKSLDGLKQIFLFPVIGVFISGAIMWYMSVPMKDINTGMMAFLKGMENSSPLVLGLIIGIMCASDMGGPINKA AYLTGTALLAQGNYFFMAGVSAACIAPPLATGFSVLFNRKAYSENERSAGYVNFLLGSTHITEGAIPFAAKNPLINIPIF MVGSSIAAILTYTTRISVPAPHGGFIVLPLVNKPFLWVLFIVIGAIVSGLLLSLADGHKAHVGEKTLEDKREVSNERKVN DESLDSILTVDNIKVNVDVESRDELLRYLSNLSVSNGYSSDANAVYNKYLARESAGSTGMEKGIAIPHAQDNTINTSAML VLKLKQPIEWKTFDNQPVDTVISFLIPERDQGNHLRYLSSVSKLLMHESFVQELKNAKSVEEIAALFKK >Mature_628_residues TKYTIIAATGCPTGIAHTYMAQEALEEAAKKRGVSIKVETHGQSGTENQFTPEEISNAKGVIIAADKDVDIERFDGKRLI NVSVTKGMKEPDELVSKILDDDVPIYHSNGQYNKEDQISTTNGTFWHSIYVDLMNGVSHMLPLVVAGGVLTAISFFWGIN SADPNSAQFNSFAQLLNTIGGFAMNLMVPVLCAYIAEAIGKRSGLVVGFATGMIAYTNGTGFLGGIVGGFLAGYTVVLLQ HLFKKLPKSLDGLKQIFLFPVIGVFISGAIMWYMSVPMKDINTGMMAFLKGMENSSPLVLGLIIGIMCASDMGGPINKAA YLTGTALLAQGNYFFMAGVSAACIAPPLATGFSVLFNRKAYSENERSAGYVNFLLGSTHITEGAIPFAAKNPLINIPIFM VGSSIAAILTYTTRISVPAPHGGFIVLPLVNKPFLWVLFIVIGAIVSGLLLSLADGHKAHVGEKTLEDKREVSNERKVND ESLDSILTVDNIKVNVDVESRDELLRYLSNLSVSNGYSSDANAVYNKYLARESAGSTGMEKGIAIPHAQDNTINTSAMLV LKLKQPIEWKTFDNQPVDTVISFLIPERDQGNHLRYLSSVSKLLMHESFVQELKNAKSVEEIAALFKK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=452, Percent_Identity=39.8230088495575, Blast_Score=310, Evalue=1e-85, Organism=Escherichia coli, GI1786951, Length=439, Percent_Identity=32.8018223234624, Blast_Score=216, Evalue=4e-57, Organism=Escherichia coli, GI87082348, Length=441, Percent_Identity=31.7460317460317, Blast_Score=206, Evalue=3e-54, Organism=Escherichia coli, GI1790386, Length=302, Percent_Identity=38.0794701986755, Blast_Score=189, Evalue=7e-49, Organism=Escherichia coli, GI1788729, Length=386, Percent_Identity=27.2020725388601, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1790387, Length=102, Percent_Identity=50, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1789597, Length=148, Percent_Identity=33.7837837837838, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI2367327, Length=139, Percent_Identity=23.7410071942446, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1788730, Length=95, Percent_Identity=35.7894736842105, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1790390, Length=97, Percent_Identity=38.1443298969072, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI48994992, Length=143, Percent_Identity=27.972027972028, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788726, Length=149, Percent_Identity=26.8456375838926, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR004715 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF00359 PTS_EIIA_2; PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 67993; Mature: 67862
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYTIIAATGCPTGIAHTYMAQEALEEAAKKRGVSIKVETHGQSGTENQFTPEEISNAK CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCCCC GVIIAADKDVDIERFDGKRLINVSVTKGMKEPDELVSKILDDDVPIYHSNGQYNKEDQIS CEEEEECCCCCCEECCCCEEEEEEHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCC TTNGTFWHSIYVDLMNGVSHMLPLVVAGGVLTAISFFWGINSADPNSAQFNSFAQLLNTI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH GGFAMNLMVPVLCAYIAEAIGKRSGLVVGFATGMIAYTNGTGFLGGIVGGFLAGYTVVLL HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHH QHLFKKLPKSLDGLKQIFLFPVIGVFISGAIMWYMSVPMKDINTGMMAFLKGMENSSPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHH LGLIIGIMCASDMGGPINKAAYLTGTALLAQGNYFFMAGVSAACIAPPLATGFSVLFNRK HHHHHHHHHHHCCCCCCCCHHHHHHHEEEECCCEEEEECCCHHHHCCHHHHHHHHHHCCH AYSENERSAGYVNFLLGSTHITEGAIPFAAKNPLINIPIFMVGSSIAAILTYTTRISVPA HCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHEEECCC PHGGFIVLPLVNKPFLWVLFIVIGAIVSGLLLSLADGHKAHVGEKTLEDKREVSNERKVN CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCC DESLDSILTVDNIKVNVDVESRDELLRYLSNLSVSNGYSSDANAVYNKYLARESAGSTGM HHHHHHEEEECCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC EKGIAIPHAQDNTINTSAMLVLKLKQPIEWKTFDNQPVDTVISFLIPERDQGNHLRYLSS CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHH VSKLLMHESFVQELKNAKSVEEIAALFKK HHHHHHHHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure TKYTIIAATGCPTGIAHTYMAQEALEEAAKKRGVSIKVETHGQSGTENQFTPEEISNAK CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCCCC GVIIAADKDVDIERFDGKRLINVSVTKGMKEPDELVSKILDDDVPIYHSNGQYNKEDQIS CEEEEECCCCCCEECCCCEEEEEEHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCC TTNGTFWHSIYVDLMNGVSHMLPLVVAGGVLTAISFFWGINSADPNSAQFNSFAQLLNTI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH GGFAMNLMVPVLCAYIAEAIGKRSGLVVGFATGMIAYTNGTGFLGGIVGGFLAGYTVVLL HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHH QHLFKKLPKSLDGLKQIFLFPVIGVFISGAIMWYMSVPMKDINTGMMAFLKGMENSSPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHH LGLIIGIMCASDMGGPINKAAYLTGTALLAQGNYFFMAGVSAACIAPPLATGFSVLFNRK HHHHHHHHHHHCCCCCCCCHHHHHHHEEEECCCEEEEECCCHHHHCCHHHHHHHHHHCCH AYSENERSAGYVNFLLGSTHITEGAIPFAAKNPLINIPIFMVGSSIAAILTYTTRISVPA HCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHEEECCC PHGGFIVLPLVNKPFLWVLFIVIGAIVSGLLLSLADGHKAHVGEKTLEDKREVSNERKVN CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCC DESLDSILTVDNIKVNVDVESRDELLRYLSNLSVSNGYSSDANAVYNKYLARESAGSTGM HHHHHHEEEECCEEEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC EKGIAIPHAQDNTINTSAMLVLKLKQPIEWKTFDNQPVDTVISFLIPERDQGNHLRYLSS CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHH VSKLLMHESFVQELKNAKSVEEIAALFKK HHHHHHHHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]