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The map label for this gene is yfeT [C]

Identifier: 116491954

GI number: 116491954

Start: 166186

End: 166932

Strand: Reverse

Name: yfeT [C]

Synonym: PEPE_0140

Alternate gene names: 116491954

Gene position: 166932-166186 (Counterclockwise)

Preceding gene: 116491959

Following gene: 116491950

Centisome position: 9.11

GC content: 32.93

Gene sequence:

>747_bases
TTGGCAAATGATAATTTGAGTTCGACAGAACAATTTGTATGGAAATTCATTCAAGACAACCTAGAATTGGTTCCTTTTTT
ATCTATTGTTGAGTTGAGTGAACGAGCTAACGTTTCTACGGCCACTATTATCCGTGCGCTAAGAAAAAAAGGTTTTACAG
GTTTCAGTGATTTTAAGCATGGAGTAGCAAAGAATAATAGTTCAAAGGATTTTACCAATTTAGAGCGTGCCGATAGTGAT
ATTAAAAGTGCCATCCTAAAAAACGAACATGAAGTTACTAACACGATCAAAATGATTAATATTCCAGATATTGAACAGTC
TGTGCAAAGAATCAAGCATGCCAAAACCATTTACATTTTTGCCCGTGGTTTTTCTGAATTAATTGCAAAAGAATTATTAG
TAAAACTGCAACTCTTGAATAAAAATTGCCAACTAAGTGATGATCCAAATATTATCCGCACTTTATCAGCAGATATTAGA
CCTGGCAATTTGGTTATTATTATTTCTCTAAACGGTGAAACCCCTGAATTAATCGAAGCTGCAAAGAAAACATCAAAAAA
TAAAATTCCCATTATATTAATAACTACTAATGCTGATAGTACAATCGGTAAATACTCTACAATTGAATTATGTGGTTTCA
AATCCGAAACAACTTATTTTCCAGCCTTTGAAGTTCACTCTAGGCTCCCCCTACAAGTTATATCTCGTGTATTATTGGAT
TCTTATGTAATTCGTACCCAAAAATAA

Upstream 100 bases:

>100_bases
TTATACTCCTAATTCTAGCCTCATCCATAATGTAAATGTTTTCAAAAACTTTGTTATTTATGTTATTGTTGAAAAAGAAT
TTACAATCGGAGGGATTGGT

Downstream 100 bases:

>100_bases
AAACCTCCGAACTTCAAAACGAAATTCGGAGGTTTTCTTTAAATTTTCTTGGTTTTAACAATGATTACTCCCATGATGGT
TGCTAAGGTAATGGCCACCA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MANDNLSSTEQFVWKFIQDNLELVPFLSIVELSERANVSTATIIRALRKKGFTGFSDFKHGVAKNNSSKDFTNLERADSD
IKSAILKNEHEVTNTIKMINIPDIEQSVQRIKHAKTIYIFARGFSELIAKELLVKLQLLNKNCQLSDDPNIIRTLSADIR
PGNLVIIISLNGETPELIEAAKKTSKNKIPIILITTNADSTIGKYSTIELCGFKSETTYFPAFEVHSRLPLQVISRVLLD
SYVIRTQK

Sequences:

>Translated_248_residues
MANDNLSSTEQFVWKFIQDNLELVPFLSIVELSERANVSTATIIRALRKKGFTGFSDFKHGVAKNNSSKDFTNLERADSD
IKSAILKNEHEVTNTIKMINIPDIEQSVQRIKHAKTIYIFARGFSELIAKELLVKLQLLNKNCQLSDDPNIIRTLSADIR
PGNLVIIISLNGETPELIEAAKKTSKNKIPIILITTNADSTIGKYSTIELCGFKSETTYFPAFEVHSRLPLQVISRVLLD
SYVIRTQK
>Mature_247_residues
ANDNLSSTEQFVWKFIQDNLELVPFLSIVELSERANVSTATIIRALRKKGFTGFSDFKHGVAKNNSSKDFTNLERADSDI
KSAILKNEHEVTNTIKMINIPDIEQSVQRIKHAKTIYIFARGFSELIAKELLVKLQLLNKNCQLSDDPNIIRTLSADIRP
GNLVIIISLNGETPELIEAAKKTSKNKIPIILITTNADSTIGKYSTIELCGFKSETTYFPAFEVHSRLPLQVISRVLLDS
YVIRTQK

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=231, Percent_Identity=22.0779220779221, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 27897; Mature: 27765

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANDNLSSTEQFVWKFIQDNLELVPFLSIVELSERANVSTATIIRALRKKGFTGFSDFKH
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH
GVAKNNSSKDFTNLERADSDIKSAILKNEHEVTNTIKMINIPDIEQSVQRIKHAKTIYIF
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCHHHHHHHHHHHCEEEEE
ARGFSELIAKELLVKLQLLNKNCQLSDDPNIIRTLSADIRPGNLVIIISLNGETPELIEA
ECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCHHHHHH
AKKTSKNKIPIILITTNADSTIGKYSTIELCGFKSETTYFPAFEVHSRLPLQVISRVLLD
HHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHH
SYVIRTQK
HHHHHCCC
>Mature Secondary Structure 
ANDNLSSTEQFVWKFIQDNLELVPFLSIVELSERANVSTATIIRALRKKGFTGFSDFKH
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH
GVAKNNSSKDFTNLERADSDIKSAILKNEHEVTNTIKMINIPDIEQSVQRIKHAKTIYIF
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCHHHHHHHHHHHCEEEEE
ARGFSELIAKELLVKLQLLNKNCQLSDDPNIIRTLSADIRPGNLVIIISLNGETPELIEA
ECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCHHHHHH
AKKTSKNKIPIILITTNADSTIGKYSTIELCGFKSETTYFPAFEVHSRLPLQVISRVLLD
HHHCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCHHHHHHHHHH
SYVIRTQK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]