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The map label for this gene is yshB [H]

Identifier: 116491860

GI number: 116491860

Start: 39569

End: 40096

Strand: Reverse

Name: yshB [H]

Synonym: PEPE_0042

Alternate gene names: 116491860

Gene position: 40096-39569 (Counterclockwise)

Preceding gene: 116491865

Following gene: 116491859

Centisome position: 2.19

GC content: 38.07

Gene sequence:

>528_bases
ATGCTACTATCTTTAATAATAATTTTAATTTTAATTATGGCGATTGCTCGCGGCTGGCGCCGAGGGCTCATCCTGGAATT
ATTGTATTCACTGGGTTATATCGTTGTTTTTATTTTTGCTAAAGTTTTTACCAATGACTTTGCTGCTTTCCTAACTACTA
CTTTCGGAGGCTGGACTAGTAACCAAGTTACTAATTTAACAGTCATGCATTCCGTCGCCTTTATTCTACTAATGTCCATC
GGCTGGATCATTATTCGTTTAGTAGGGCGTTTATCGCAAATGGTTACTTGGCTACCAGTTATCCATCAAGTAAATAGCCT
AGCTGGCGCGGTGGTTGGTTTAGTAATTACTTATGGAATTTCCTTTGTTATTCTCAGCATCAGCCAATTTATTCCCAATG
ATTTTTATCAAGAGCAGCTCTCCCAATCAGTAGTAGCTCAGACCATCTTGTCGAAAACTCCCGCTGTTTCATCAGAACTG
ATCAATAACTACATTATTCATACCGAACAAACTAAAAACGTACTATAA

Upstream 100 bases:

>100_bases
TTTCATCTATAGTGTTTAGATACTTAGGATTCTCTCGTCCATTGATATACGGGAGAATCTGTTCACAGACTCAACTACTA
ATTAAGTAAAGGAGCTCTTA

Downstream 100 bases:

>100_bases
TCAGGAGGAACTATGGAATTTCAATTAATCAAGAAATATATCGCAGCCTACCTATCAACCACAACAACCCGTTTAGAGAC
TGTGGAAGCACCAATGCCCG

Product: membrane ancor connecting MutS2 with cell-division Z-ring

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLLSLIIILILIMAIARGWRRGLILELLYSLGYIVVFIFAKVFTNDFAAFLTTTFGGWTSNQVTNLTVMHSVAFILLMSI
GWIIIRLVGRLSQMVTWLPVIHQVNSLAGAVVGLVITYGISFVILSISQFIPNDFYQEQLSQSVVAQTILSKTPAVSSEL
INNYIIHTEQTKNVL

Sequences:

>Translated_175_residues
MLLSLIIILILIMAIARGWRRGLILELLYSLGYIVVFIFAKVFTNDFAAFLTTTFGGWTSNQVTNLTVMHSVAFILLMSI
GWIIIRLVGRLSQMVTWLPVIHQVNSLAGAVVGLVITYGISFVILSISQFIPNDFYQEQLSQSVVAQTILSKTPAVSSEL
INNYIIHTEQTKNVL
>Mature_175_residues
MLLSLIIILILIMAIARGWRRGLILELLYSLGYIVVFIFAKVFTNDFAAFLTTTFGGWTSNQVTNLTVMHSVAFILLMSI
GWIIIRLVGRLSQMVTWLPVIHQVNSLAGAVVGLVITYGISFVILSISQFIPNDFYQEQLSQSVVAQTILSKTPAVSSEL
INNYIIHTEQTKNVL

Specific function: Unknown

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 19506; Mature: 19506

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSLIIILILIMAIARGWRRGLILELLYSLGYIVVFIFAKVFTNDFAAFLTTTFGGWTS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NQVTNLTVMHSVAFILLMSIGWIIIRLVGRLSQMVTWLPVIHQVNSLAGAVVGLVITYGI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFVILSISQFIPNDFYQEQLSQSVVAQTILSKTPAVSSELINNYIIHTEQTKNVL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MLLSLIIILILIMAIARGWRRGLILELLYSLGYIVVFIFAKVFTNDFAAFLTTTFGGWTS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NQVTNLTVMHSVAFILLMSIGWIIIRLVGRLSQMVTWLPVIHQVNSLAGAVVGLVITYGI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFVILSISQFIPNDFYQEQLSQSVVAQTILSKTPAVSSELINNYIIHTEQTKNVL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]