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The map label for this gene is 116491838

Identifier: 116491838

GI number: 116491838

Start: 21247

End: 21819

Strand: Direct

Name: 116491838

Synonym: PEPE_0020

Alternate gene names: NA

Gene position: 21247-21819 (Clockwise)

Preceding gene: 116491837

Following gene: 116491843

Centisome position: 1.16

GC content: 38.05

Gene sequence:

>573_bases
ATGTCAATCGGAACAACGTTACAAAAAATACGGCAAGCACGAGATCTTACTCAACAAGAAGTGGCGACACAAATGTATGT
TACCAGACAAACGATTTCACGTTGGGAACAAGGAAAAACGATGCCAAATATATATGCTTTAAAAGATCTTGCGCAGTTGT
ATAATGTTTCGCTCGACCAATTGGTTGCAAGGCATCCCTCTAATTCGAAAGAGGAAGCAGGTCATAAAATGAAAAAAATT
AATTGGTTAGCATTATTTGGTTTTTTCTGGTTCAACGTTATTGTCACCATGGGAGTTGTCTTGGCAGTTGCCGGAATCTT
ATGTGGTCTTTGGATTTCCATCATCGGCTTTATAGTGTCTCCAGCCTTATTAGTAGGTGAATGGCTGGTTGTCCATATGA
TGGGATGGGTAACTCCTGTTAGTTTAAACTTGTATCAAATCCCGCTGACATTGATGCTTTGTGCAATCGGATTAGGCGCT
TTTCCATTGCTAAAGCAGCTGACGATGTATTTAGTAAACTTTTTTGAAAAATATATTAGATATAATCTCCGTTCTATCTA
TACTGAAAAATGA

Upstream 100 bases:

>100_bases
AAAATGAAGTTAATAAAACTTGATTTTTAAGCCATGTAACAGGTTTGTTGCTTGGTTTTTAAAATGACTGTGGCAGAGTA
GAACTAGAAGGGGTGGTTGG

Downstream 100 bases:

>100_bases
TAAAAAGGCAAATCAACTGACGTTGGTTTGCCTTTTTAAAGTTTGATTTAAAAGTAATCCCATAGCATAGGTGGTTCTTT
ACGTAAGGTAGCATCTAAAT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; HTH-Type Transcriptional Regulator

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSIGTTLQKIRQARDLTQQEVATQMYVTRQTISRWEQGKTMPNIYALKDLAQLYNVSLDQLVARHPSNSKEEAGHKMKKI
NWLALFGFFWFNVIVTMGVVLAVAGILCGLWISIIGFIVSPALLVGEWLVVHMMGWVTPVSLNLYQIPLTLMLCAIGLGA
FPLLKQLTMYLVNFFEKYIRYNLRSIYTEK

Sequences:

>Translated_190_residues
MSIGTTLQKIRQARDLTQQEVATQMYVTRQTISRWEQGKTMPNIYALKDLAQLYNVSLDQLVARHPSNSKEEAGHKMKKI
NWLALFGFFWFNVIVTMGVVLAVAGILCGLWISIIGFIVSPALLVGEWLVVHMMGWVTPVSLNLYQIPLTLMLCAIGLGA
FPLLKQLTMYLVNFFEKYIRYNLRSIYTEK
>Mature_189_residues
SIGTTLQKIRQARDLTQQEVATQMYVTRQTISRWEQGKTMPNIYALKDLAQLYNVSLDQLVARHPSNSKEEAGHKMKKIN
WLALFGFFWFNVIVTMGVVLAVAGILCGLWISIIGFIVSPALLVGEWLVVHMMGWVTPVSLNLYQIPLTLMLCAIGLGAF
PLLKQLTMYLVNFFEKYIRYNLRSIYTEK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21706; Mature: 21575

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGTTLQKIRQARDLTQQEVATQMYVTRQTISRWEQGKTMPNIYALKDLAQLYNVSLDQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHH
LVARHPSNSKEEAGHKMKKINWLALFGFFWFNVIVTMGVVLAVAGILCGLWISIIGFIVS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PALLVGEWLVVHMMGWVTPVSLNLYQIPLTLMLCAIGLGAFPLLKQLTMYLVNFFEKYIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
YNLRSIYTEK
HHHHHHHCCC
>Mature Secondary Structure 
SIGTTLQKIRQARDLTQQEVATQMYVTRQTISRWEQGKTMPNIYALKDLAQLYNVSLDQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHH
LVARHPSNSKEEAGHKMKKINWLALFGFFWFNVIVTMGVVLAVAGILCGLWISIIGFIVS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PALLVGEWLVVHMMGWVTPVSLNLYQIPLTLMLCAIGLGAFPLLKQLTMYLVNFFEKYIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
YNLRSIYTEK
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA