Click here to switch to the map view.

The map label for this gene is 116491835

Identifier: 116491835

GI number: 116491835

Start: 18825

End: 19328

Strand: Direct

Name: 116491835

Synonym: PEPE_0017

Alternate gene names: NA

Gene position: 18825-19328 (Clockwise)

Preceding gene: 116491834

Following gene: 116491836

Centisome position: 1.03

GC content: 40.48

Gene sequence:

>504_bases
GTGGCTTCAGATGTTTTACAGAAGTTGAAACCGGATAAAAGAACGGCCATCGAAGAATCGCTATTATTGGAATTCACGCA
TCATCCGGTTACAGAAGCACAAGTTGCTCGCATCGTGGAAGGTGCCGGAATTTCACGTGGTGCATTTTATAATTATTTTA
AAGATGTACCAGATGCTTACCGTTATTTATATCAAATCGCAATTCAGGATATCCACCAGGCAATTCGGCAAAATGAAAGG
CGTGGCGAAAATTTGGTCGATGAAGCTCGCCAATTTATTAAGAATACTCAGAATAGTAAGTATTACAAGCTATTTCAAAT
GCACTATCACTACAACGAAGTTTATGTGACCAGATTAGTTGCACCACTTGAACCGCATGCTGAGATACAGTGGGCGGAAA
TGACACTAATCCACGATACAATTCGTTGCGCACTGATTGAACCAGGGACTACCGATGCTCGATTACACCAATTAGAAAAA
GTCCTAAAAATTCTGGAGGAATAA

Upstream 100 bases:

>100_bases
TTAACTTAAAAAAATAAGCAAATAATTTTGACACGGTGTCACTTTGTGCTATTCTAGCATTGTTGACACGGTGTCATTTT
TATTTTAAGGAGGTGGAGGA

Downstream 100 bases:

>100_bases
TTATGTTTCTAGCTTTAAAAGAAATCAAAAAAGAAAAATTACGATACAGTCTAATTATCGGAATGATTGTTTTGATTAGT
TATTTAATTTTTATTTTAAC

Product: transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MASDVLQKLKPDKRTAIEESLLLEFTHHPVTEAQVARIVEGAGISRGAFYNYFKDVPDAYRYLYQIAIQDIHQAIRQNER
RGENLVDEARQFIKNTQNSKYYKLFQMHYHYNEVYVTRLVAPLEPHAEIQWAEMTLIHDTIRCALIEPGTTDARLHQLEK
VLKILEE

Sequences:

>Translated_167_residues
MASDVLQKLKPDKRTAIEESLLLEFTHHPVTEAQVARIVEGAGISRGAFYNYFKDVPDAYRYLYQIAIQDIHQAIRQNER
RGENLVDEARQFIKNTQNSKYYKLFQMHYHYNEVYVTRLVAPLEPHAEIQWAEMTLIHDTIRCALIEPGTTDARLHQLEK
VLKILEE
>Mature_166_residues
ASDVLQKLKPDKRTAIEESLLLEFTHHPVTEAQVARIVEGAGISRGAFYNYFKDVPDAYRYLYQIAIQDIHQAIRQNERR
GENLVDEARQFIKNTQNSKYYKLFQMHYHYNEVYVTRLVAPLEPHAEIQWAEMTLIHDTIRCALIEPGTTDARLHQLEKV
LKILEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19584; Mature: 19452

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDVLQKLKPDKRTAIEESLLLEFTHHPVTEAQVARIVEGAGISRGAFYNYFKDVPDAY
CCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCHHHH
RYLYQIAIQDIHQAIRQNERRGENLVDEARQFIKNTQNSKYYKLFQMHYHYNEVYVTRLV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
APLEPHAEIQWAEMTLIHDTIRCALIEPGTTDARLHQLEKVLKILEE
CCCCCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASDVLQKLKPDKRTAIEESLLLEFTHHPVTEAQVARIVEGAGISRGAFYNYFKDVPDAY
CHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCHHHH
RYLYQIAIQDIHQAIRQNERRGENLVDEARQFIKNTQNSKYYKLFQMHYHYNEVYVTRLV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
APLEPHAEIQWAEMTLIHDTIRCALIEPGTTDARLHQLEKVLKILEE
CCCCCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA