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The map label for this gene is yiaD [C]

Identifier: 116332660

GI number: 116332660

Start: 275187

End: 276278

Strand: Reverse

Name: yiaD [C]

Synonym: LBJ_4241

Alternate gene names: 116332660

Gene position: 276278-275187 (Counterclockwise)

Preceding gene: 116332661

Following gene: 116332659

Centisome position: 92.17

GC content: 40.93

Gene sequence:

>1092_bases
ATGGCAAGAAAGGCAAACAATTACGTTACTATCAAAGGTAGAAAATATGATCGTGAGTTGATCAAACTTGCGGAAGAATT
CACTTCCGGTAAACGTAATGCTAAGATTTCAGTTAACAATGCAAAACAACTTTTAAAAGCGGTCAAAGATAATAACAGTT
ATACGGATATCGAAAAACATACGATCGAATATATCCGTGAAAATTATAAATTCACTGAAAAGTCGGACGAGTGGTTCCGT
ACGGAAATCCGCAAATGGGCCACTGAAAAAGTCCAAGAAACAAACAATGAGGGAGCCGGGGAATCGATCGTGGTCGATGA
GGAAGAGGCTCCGAACGAGAATTTTCCATCGAGTTGGGGAGAAAACAAAAGCGACGGTACTTCTGAAATTCCGGCCAAAG
ATTATACGAATTACATTCCTACTCCTTCCGCAAAGCCGCATCTGAAAAGGGACAAAACCGTTCCGGTTCTGATCTTTTTA
ATCGGTCTTCTCGTTCTCACCGGATTGATTTATTTTTTCTGGACCTTATTCTCCTCCGAAAACAAGGATCGTTCCAACGA
ATTGGGTAAAACAAAAATAAACGTCGCGATCGTAAAAGGTAAGGAGAAGTCTTCTTCTGTTTCTAAAATGAAAAAAACCG
TAACAGAACCAAATTCCGAAAAGTTGGAAACCGTAAAGGGCACGATCGCTAAAGCAGAACCAAAGTTTTCCTGGTTCGAA
AAAAAACACGAATTATCTTCCAATCCTAAATTTAGAGAAATCGAATCCAAAGTGATTCACTTTGAAAAAAACAGTATTCA
AATTCGTAAAGAGGCAAAACCAGGTCTCAACCGACTTTCCCGTTGGATGAAAGAGGACTCTTCCATTCGAGTTAAAATAT
TCGGCCATACTTCTTTGGAGGGAACAGAAGCGGCCAACCAAAGGGTTTCTCTTCTTCGTGCTGAAACGGTTCGGGATTAT
CTTGCGGGCAACGGAATTTCCAAGGATCGTTTCGAAGTGATTCCCAAAGGTGCAAGTGTTCCAATCGGCGACAACTCCAA
AGAAGAGGGAAAGGAAATGAATCGGCGCGTAGAACTTAGAATTCGTAACTGA

Upstream 100 bases:

>100_bases
AGTGTCAATTTTAGAACGATTCGAACCGAATTTATAAAAGGAGATAAAACTTTGGTTGCATGGAACCAATTCTTCTCTCA
ATCTTGATGCGGCGGAGATC

Downstream 100 bases:

>100_bases
ATTAAAAAATCCTATACAAACTAAATGCTTGCAACAGCATGATTTTATAACTTGTCCTATTCTTTCGATGAACTGGAAGG
ACAACTCGTATAAGGACAGG

Product: OmpA-family protein

Products: NA

Alternate protein names: Outer Membrane Protein; OmpA Family Protein; OmpA/MotB Domain-Containing Protein; OmpA/MotB; Outer Membrane Porin F; OmpA Domain Protein; Outer Membrane Lipoprotein; Type VI Secretion System OmpA/MotB; Ompa/Motb Domain Protein; OmpA/OmpF Family Outer Membrane Protein; OmpA/MotB Protein; OmpA-Family Protein; Inner Membrane Lipoprotein YiaD; Outer Membrane Protein OmpA; Outer Membrane Protein A; OmpA Family Outer Membrane Protein; Thrombospondin Type 3 Repeat Family; Lipoprotein

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MARKANNYVTIKGRKYDRELIKLAEEFTSGKRNAKISVNNAKQLLKAVKDNNSYTDIEKHTIEYIRENYKFTEKSDEWFR
TEIRKWATEKVQETNNEGAGESIVVDEEEAPNENFPSSWGENKSDGTSEIPAKDYTNYIPTPSAKPHLKRDKTVPVLIFL
IGLLVLTGLIYFFWTLFSSENKDRSNELGKTKINVAIVKGKEKSSSVSKMKKTVTEPNSEKLETVKGTIAKAEPKFSWFE
KKHELSSNPKFREIESKVIHFEKNSIQIRKEAKPGLNRLSRWMKEDSSIRVKIFGHTSLEGTEAANQRVSLLRAETVRDY
LAGNGISKDRFEVIPKGASVPIGDNSKEEGKEMNRRVELRIRN

Sequences:

>Translated_363_residues
MARKANNYVTIKGRKYDRELIKLAEEFTSGKRNAKISVNNAKQLLKAVKDNNSYTDIEKHTIEYIRENYKFTEKSDEWFR
TEIRKWATEKVQETNNEGAGESIVVDEEEAPNENFPSSWGENKSDGTSEIPAKDYTNYIPTPSAKPHLKRDKTVPVLIFL
IGLLVLTGLIYFFWTLFSSENKDRSNELGKTKINVAIVKGKEKSSSVSKMKKTVTEPNSEKLETVKGTIAKAEPKFSWFE
KKHELSSNPKFREIESKVIHFEKNSIQIRKEAKPGLNRLSRWMKEDSSIRVKIFGHTSLEGTEAANQRVSLLRAETVRDY
LAGNGISKDRFEVIPKGASVPIGDNSKEEGKEMNRRVELRIRN
>Mature_362_residues
ARKANNYVTIKGRKYDRELIKLAEEFTSGKRNAKISVNNAKQLLKAVKDNNSYTDIEKHTIEYIRENYKFTEKSDEWFRT
EIRKWATEKVQETNNEGAGESIVVDEEEAPNENFPSSWGENKSDGTSEIPAKDYTNYIPTPSAKPHLKRDKTVPVLIFLI
GLLVLTGLIYFFWTLFSSENKDRSNELGKTKINVAIVKGKEKSSSVSKMKKTVTEPNSEKLETVKGTIAKAEPKFSWFEK
KHELSSNPKFREIESKVIHFEKNSIQIRKEAKPGLNRLSRWMKEDSSIRVKIFGHTSLEGTEAANQRVSLLRAETVRDYL
AGNGISKDRFEVIPKGASVPIGDNSKEEGKEMNRRVELRIRN

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41554; Mature: 41422

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKANNYVTIKGRKYDRELIKLAEEFTSGKRNAKISVNNAKQLLKAVKDNNSYTDIEKH
CCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHH
TIEYIRENYKFTEKSDEWFRTEIRKWATEKVQETNNEGAGESIVVDEEEAPNENFPSSWG
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC
ENKSDGTSEIPAKDYTNYIPTPSAKPHLKRDKTVPVLIFLIGLLVLTGLIYFFWTLFSSE
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
NKDRSNELGKTKINVAIVKGKEKSSSVSKMKKTVTEPNSEKLETVKGTIAKAEPKFSWFE
CCCCHHHCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH
KKHELSSNPKFREIESKVIHFEKNSIQIRKEAKPGLNRLSRWMKEDSSIRVKIFGHTSLE
HHHHCCCCCCHHHHHHHHEEEECCCEEEEHHCCCCHHHHHHHHHCCCCEEEEEEECCCCC
GTEAANQRVSLLRAETVRDYLAGNGISKDRFEVIPKGASVPIGDNSKEEGKEMNRRVELR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHCCEEEEE
IRN
ECC
>Mature Secondary Structure 
ARKANNYVTIKGRKYDRELIKLAEEFTSGKRNAKISVNNAKQLLKAVKDNNSYTDIEKH
CCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHH
TIEYIRENYKFTEKSDEWFRTEIRKWATEKVQETNNEGAGESIVVDEEEAPNENFPSSWG
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCC
ENKSDGTSEIPAKDYTNYIPTPSAKPHLKRDKTVPVLIFLIGLLVLTGLIYFFWTLFSSE
CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
NKDRSNELGKTKINVAIVKGKEKSSSVSKMKKTVTEPNSEKLETVKGTIAKAEPKFSWFE
CCCCHHHCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHH
KKHELSSNPKFREIESKVIHFEKNSIQIRKEAKPGLNRLSRWMKEDSSIRVKIFGHTSLE
HHHHCCCCCCHHHHHHHHEEEECCCEEEEHHCCCCHHHHHHHHHCCCCEEEEEEECCCCC
GTEAANQRVSLLRAETVRDYLAGNGISKDRFEVIPKGASVPIGDNSKEEGKEMNRRVELR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHCCEEEEE
IRN
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA