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The map label for this gene is 116332658

Identifier: 116332658

GI number: 116332658

Start: 272020

End: 272718

Strand: Direct

Name: 116332658

Synonym: LBJ_4239

Alternate gene names: NA

Gene position: 272020-272718 (Clockwise)

Preceding gene: 116332657

Following gene: 116332662

Centisome position: 90.75

GC content: 42.06

Gene sequence:

>699_bases
ATGAAATCGAGCCGATCAAAGTCAAATAATCCGCAAATGAAGGACAACTTTGTCTCTGAAGTAACGATTCGCAAAAGAAA
TCGTGCCGCGACAGAAACTTCCATCCTTTTGGCGGCGATTCAAGTTTTCGCAAAGAAAGGTTATGACGCCGCCAATACGA
AGGACATTGCAAAACTCGCAAACGCAAACGAGGCATTGATCTTCAGATATTTCGGAAATAAAAAAGGTCTTCTGGAAGCT
ATTCTCACTCGAAGTGAAGATATCAAACAGGAGAATTCCCTTTCCTCCCGCGTCCGCAAAACTTCGAAAAATTACCAAGA
CCTTGAAGCAAGCATTCGCTACTTGATATCGGGCAAATGTAAAGATTTTAAAGATGCCGAGGACTTTATGAAAGTTGCGG
TGAGTCAGATCATCCTGGATCCCGAAGTCAGCCAAATTATTCAAAAGAAAATTTATACGAAAGCGCTTCCCGAATTTATC
ACAGAACTGGAAAAGTTTAAGAAAGCGGGAAAAATCAATCCGAAAGCGGATTTAAAATCCGCCGCTTACGCGATCTCATC
GTTTGCGTTCGCACTCGGATTTATGGGTCAATGCGTTTATAAAATTCCTCCCTCGGAAATCCAAGCCACGATCAAAGAAG
TGGCGAGGATTTTTCGAAAAGGTTTAGAACCGGGGCCAACCAAAAAAAAATCGAAGTAA

Upstream 100 bases:

>100_bases
CACACATTATTTTCCATTACCACCGGTCAAGTTAAGAGAAACATCTCTTTTGAAATAGTGAGTGACACTTAGTCTCATCT
TGACTTTCATTGGGATCGAA

Downstream 100 bases:

>100_bases
ATTTTTTACGTCGGACTTTTCCCGCGCTCCTAGAATGCGGGAAAAGTTTGATCTACTTCCAAAACCTCACAACTATTTCT
TCTGCTCCTCGCTGATTAGG

Product: AcrR family transcriptional regulator

Products: NA

Alternate protein names: AcrR Family Transcriptional Regulator; TetR Family Transcriptional Regulator

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKSSRSKSNNPQMKDNFVSEVTIRKRNRAATETSILLAAIQVFAKKGYDAANTKDIAKLANANEALIFRYFGNKKGLLEA
ILTRSEDIKQENSLSSRVRKTSKNYQDLEASIRYLISGKCKDFKDAEDFMKVAVSQIILDPEVSQIIQKKIYTKALPEFI
TELEKFKKAGKINPKADLKSAAYAISSFAFALGFMGQCVYKIPPSEIQATIKEVARIFRKGLEPGPTKKKSK

Sequences:

>Translated_232_residues
MKSSRSKSNNPQMKDNFVSEVTIRKRNRAATETSILLAAIQVFAKKGYDAANTKDIAKLANANEALIFRYFGNKKGLLEA
ILTRSEDIKQENSLSSRVRKTSKNYQDLEASIRYLISGKCKDFKDAEDFMKVAVSQIILDPEVSQIIQKKIYTKALPEFI
TELEKFKKAGKINPKADLKSAAYAISSFAFALGFMGQCVYKIPPSEIQATIKEVARIFRKGLEPGPTKKKSK
>Mature_232_residues
MKSSRSKSNNPQMKDNFVSEVTIRKRNRAATETSILLAAIQVFAKKGYDAANTKDIAKLANANEALIFRYFGNKKGLLEA
ILTRSEDIKQENSLSSRVRKTSKNYQDLEASIRYLISGKCKDFKDAEDFMKVAVSQIILDPEVSQIIQKKIYTKALPEFI
TELEKFKKAGKINPKADLKSAAYAISSFAFALGFMGQCVYKIPPSEIQATIKEVARIFRKGLEPGPTKKKSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26000; Mature: 26000

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSRSKSNNPQMKDNFVSEVTIRKRNRAATETSILLAAIQVFAKKGYDAANTKDIAKLA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
NANEALIFRYFGNKKGLLEAILTRSEDIKQENSLSSRVRKTSKNYQDLEASIRYLISGKC
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
KDFKDAEDFMKVAVSQIILDPEVSQIIQKKIYTKALPEFITELEKFKKAGKINPKADLKS
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AAYAISSFAFALGFMGQCVYKIPPSEIQATIKEVARIFRKGLEPGPTKKKSK
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKSSRSKSNNPQMKDNFVSEVTIRKRNRAATETSILLAAIQVFAKKGYDAANTKDIAKLA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
NANEALIFRYFGNKKGLLEAILTRSEDIKQENSLSSRVRKTSKNYQDLEASIRYLISGKC
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
KDFKDAEDFMKVAVSQIILDPEVSQIIQKKIYTKALPEFITELEKFKKAGKINPKADLKS
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AAYAISSFAFALGFMGQCVYKIPPSEIQATIKEVARIFRKGLEPGPTKKKSK
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA