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The map label for this gene is yjbJ [H]

Identifier: 116332657

GI number: 116332657

Start: 271194

End: 271787

Strand: Direct

Name: yjbJ [H]

Synonym: LBJ_4238

Alternate gene names: 116332657

Gene position: 271194-271787 (Clockwise)

Preceding gene: 116332654

Following gene: 116332658

Centisome position: 90.47

GC content: 42.93

Gene sequence:

>594_bases
ATGAGAATCGAAGAACTTCCACCCGTACAAAAAATTTTAAATCGAATTCAAGACATCGAAAGTCTAGCAAACCGGTTCGT
GAAAGAAACTCCGGTTCAAAACCGACAGGAACCGTTCGATTCTATGTTAAAGGCAGAAGGTGAAAAATCCGCTTCGAATC
CCAAAATAGAACCTTGGAGAACAAATTCTCGCGGTAATTGGGAAGGTATCGAACCTACTTTGGCCGAAATTATCCGTAAA
GAATCCGAAAAAAATCATCTCGATCCTTCCCTCGTTCAAAGTGTTATTAAAGCCGAATCCGGTTTTAAAACCGATGCGAT
TTCTCCGAAAGGTGCGATCGGCCTTATGCAACTTATGCCATCCACGGCCAACCTGCTGGGAGTCGACGACCCTTCCGATC
CGGCAGAAAACGTTGCGGGAGGAACGAAATTCTTAAGCGATCTCCTAAACAAATATAGAAATTTAGATCACGCACTGGCA
GCCTACAACGCAGGCCCAAAAGCAGTCGATCATTACGGAGGTATTCCTCCTTACAAAGAAACAAAAAAGTACGTTGAGAA
AGTCAAAAAATTCTATAGGGATTTTTCCGAATGA

Upstream 100 bases:

>100_bases
TATTCACAAGCAGTATAGATTTTTCAAGAACCCCCTTGAAAATTTCTCAAAAAGGTAAAAAAAGATCTTCCCGTGGGGAA
AATGTTCCGAGAGACATAAT

Downstream 100 bases:

>100_bases
CCTTCTAATTCGATCCTTTATCTATTACTCGAAAACCATAGGGAAACGACCCTTTCACTTTTATGGAATCCCTTTTTGAT
TTATTGCAAAAAGAGGGCAC

Product: transglycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRIEELPPVQKILNRIQDIESLANRFVKETPVQNRQEPFDSMLKAEGEKSASNPKIEPWRTNSRGNWEGIEPTLAEIIRK
ESEKNHLDPSLVQSVIKAESGFKTDAISPKGAIGLMQLMPSTANLLGVDDPSDPAENVAGGTKFLSDLLNKYRNLDHALA
AYNAGPKAVDHYGGIPPYKETKKYVEKVKKFYRDFSE

Sequences:

>Translated_197_residues
MRIEELPPVQKILNRIQDIESLANRFVKETPVQNRQEPFDSMLKAEGEKSASNPKIEPWRTNSRGNWEGIEPTLAEIIRK
ESEKNHLDPSLVQSVIKAESGFKTDAISPKGAIGLMQLMPSTANLLGVDDPSDPAENVAGGTKFLSDLLNKYRNLDHALA
AYNAGPKAVDHYGGIPPYKETKKYVEKVKKFYRDFSE
>Mature_197_residues
MRIEELPPVQKILNRIQDIESLANRFVKETPVQNRQEPFDSMLKAEGEKSASNPKIEPWRTNSRGNWEGIEPTLAEIIRK
ESEKNHLDPSLVQSVIKAESGFKTDAISPKGAIGLMQLMPSTANLLGVDDPSDPAENVAGGTKFLSDLLNKYRNLDHALA
AYNAGPKAVDHYGGIPPYKETKKYVEKVKKFYRDFSE

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 22052; Mature: 22052

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIEELPPVQKILNRIQDIESLANRFVKETPVQNRQEPFDSMLKAEGEKSASNPKIEPWR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
TNSRGNWEGIEPTLAEIIRKESEKNHLDPSLVQSVIKAESGFKTDAISPKGAIGLMQLMP
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC
STANLLGVDDPSDPAENVAGGTKFLSDLLNKYRNLDHALAAYNAGPKAVDHYGGIPPYKE
CHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHH
TKKYVEKVKKFYRDFSE
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIEELPPVQKILNRIQDIESLANRFVKETPVQNRQEPFDSMLKAEGEKSASNPKIEPWR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
TNSRGNWEGIEPTLAEIIRKESEKNHLDPSLVQSVIKAESGFKTDAISPKGAIGLMQLMP
CCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC
STANLLGVDDPSDPAENVAGGTKFLSDLLNKYRNLDHALAAYNAGPKAVDHYGGIPPYKE
CHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHH
TKKYVEKVKKFYRDFSE
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]