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The map label for this gene is mtnB

Identifier: 116332638

GI number: 116332638

Start: 251177

End: 251929

Strand: Reverse

Name: mtnB

Synonym: LBJ_4218

Alternate gene names: 116332638

Gene position: 251929-251177 (Counterclockwise)

Preceding gene: 116332639

Following gene: 116332637

Centisome position: 84.04

GC content: 42.23

Gene sequence:

>753_bases
ATGTCCGTCAAAAAACAACTGGAGAAGCTCTCTATATTGGGGGCTACCTACCATAAAAACGGATGGATGCCGGGAACCGC
CGGTAATCTTTCCGTCCGAATTTTAGGTGAATCCGGCTTCTGGGTGAGCGGAAGCGGTCTGGATAAGAACACATTAAACA
AACGTAATTTTCTATACGTCGATTTGAAATCGGGCCGACTTTCCCCTTCGAAAAATACCAAGGTAGAGAAAGGGCTCAAA
CCTAGCGCCGAAACTTCGATCCACAGAGCCGTCTACTGCGCATTAGACGATATTGGCTGTGGATTACATGTCCATACTCT
GGAATCCAATCTGATTCGTACCAACACTTCCCAGCATCGACCGGTCGCTCTTTTGGAACTTCCCGCGATTGAAATTCTAA
AAGTGTACGGAATCTGGAAAGAAAGCCCTAAGGTTTATGTTCCAGTGATCTATAATTTTCCGAATGTACAGGATATTTCA
GACTGTCTTGAAAGTTATTTGAAAGAATACAAACCTGTTGTTCCGTTCTGCATCATTGAAAAACACGGGATTACAGTATG
GGGAAAGGATACAGTTCAAGCAAATCGAAACTTGGAAGCGACCGATTTTATACTCAAATATATGATATCTTCTAGAAATT
TGTCTAATCCGGAAGGAAAAAAGAATTTCCCTACGGAAAATAATACTTCGGAGTCTGATCGTCAGAAAGTGTATGTTGCG
GAATTCCCGGTTTATCCGGCTACATTTTTGTAA

Upstream 100 bases:

>100_bases
TACTTGGACGATAAAAAAAGAATCAAAGCGGTTCGTTACTTTCGGGATATGAGCGGTTGGGTGCCGAACTACGTAGAAGA
AACCAATTCCCTGGACTGAT

Downstream 100 bases:

>100_bases
TAGAGAAAATTGATTTTGTCTTCAGAGAAAGAAAACGATCTTATACTCGTTGCCGGAGCCGGTTCAGGAATTGGAAAGTC
CGTATTAGAAAATCTGAATC

Product: aldolase/epimerase

Products: NA

Alternate protein names: MTRu-1-P dehydratase

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSVKKQLEKLSILGATYHKNGWMPGTAGNLSVRILGESGFWVSGSGLDKNTLNKRNFLYVDLKSGRLSPSKNTKVEKGLK
PSAETSIHRAVYCALDDIGCGLHVHTLESNLIRTNTSQHRPVALLELPAIEILKVYGIWKESPKVYVPVIYNFPNVQDIS
DCLESYLKEYKPVVPFCIIEKHGITVWGKDTVQANRNLEATDFILKYMISSRNLSNPEGKKNFPTENNTSESDRQKVYVA
EFPVYPATFL

Sequences:

>Translated_250_residues
MSVKKQLEKLSILGATYHKNGWMPGTAGNLSVRILGESGFWVSGSGLDKNTLNKRNFLYVDLKSGRLSPSKNTKVEKGLK
PSAETSIHRAVYCALDDIGCGLHVHTLESNLIRTNTSQHRPVALLELPAIEILKVYGIWKESPKVYVPVIYNFPNVQDIS
DCLESYLKEYKPVVPFCIIEKHGITVWGKDTVQANRNLEATDFILKYMISSRNLSNPEGKKNFPTENNTSESDRQKVYVA
EFPVYPATFL
>Mature_249_residues
SVKKQLEKLSILGATYHKNGWMPGTAGNLSVRILGESGFWVSGSGLDKNTLNKRNFLYVDLKSGRLSPSKNTKVEKGLKP
SAETSIHRAVYCALDDIGCGLHVHTLESNLIRTNTSQHRPVALLELPAIEILKVYGIWKESPKVYVPVIYNFPNVQDISD
CLESYLKEYKPVVPFCIIEKHGITVWGKDTVQANRNLEATDFILKYMISSRNLSNPEGKKNFPTENNTSESDRQKVYVAE
FPVYPATFL

Specific function: Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. MtnB subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MTNB_LEPBJ (Q04NC3)

Other databases:

- EMBL:   CP000351
- RefSeq:   YP_802355.1
- ProteinModelPortal:   Q04NC3
- STRING:   Q04NC3
- GeneID:   4412290
- GenomeReviews:   CP000351_GR
- KEGG:   lbj:LBJ_4218
- eggNOG:   COG0235
- HOGENOM:   HBG337716
- OMA:   EFLFECE
- PhylomeDB:   Q04NC3
- ProtClustDB:   CLSK575413
- BioCyc:   LBOR355277:LBJ_4218-MONOMER
- HAMAP:   MF_01677
- InterPro:   IPR001303
- InterPro:   IPR017714
- Gene3D:   G3DSA:3.40.225.10
- TIGRFAMs:   TIGR03328

Pfam domain/function: PF00596 Aldolase_II; SSF53639 Aldolase_II_N

EC number: =4.2.1.109

Molecular weight: Translated: 28080; Mature: 27948

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKKQLEKLSILGATYHKNGWMPGTAGNLSVRILGESGFWVSGSGLDKNTLNKRNFLYV
CCHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCEEEEE
DLKSGRLSPSKNTKVEKGLKPSAETSIHRAVYCALDDIGCGLHVHTLESNLIRTNTSQHR
EECCCCCCCCCCCHHHCCCCCCHHHHHHEEEEEEEECCCCCEEEEECCCCEEECCCCCCC
PVALLELPAIEILKVYGIWKESPKVYVPVIYNFPNVQDISDCLESYLKEYKPVVPFCIIE
CEEEEECCHHHHHHEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEE
KHGITVWGKDTVQANRNLEATDFILKYMISSRNLSNPEGKKNFPTENNTSESDRQKVYVA
ECCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCEEEEE
EFPVYPATFL
ECCCCCCCCC
>Mature Secondary Structure 
SVKKQLEKLSILGATYHKNGWMPGTAGNLSVRILGESGFWVSGSGLDKNTLNKRNFLYV
CHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCCCEEEEE
DLKSGRLSPSKNTKVEKGLKPSAETSIHRAVYCALDDIGCGLHVHTLESNLIRTNTSQHR
EECCCCCCCCCCCHHHCCCCCCHHHHHHEEEEEEEECCCCCEEEEECCCCEEECCCCCCC
PVALLELPAIEILKVYGIWKESPKVYVPVIYNFPNVQDISDCLESYLKEYKPVVPFCIIE
CEEEEECCHHHHHHEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEE
KHGITVWGKDTVQANRNLEATDFILKYMISSRNLSNPEGKKNFPTENNTSESDRQKVYVA
ECCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCEEEEE
EFPVYPATFL
ECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA